Difference between revisions of "Summary of Chromosome Sequence and Annotation Updates"
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| + | As new data become available, SGD curators update the systematic sequence and its annotation. This table summarizes the sequence and/or annotation updates made for each chromosome, since the intitial release on 1996-07-31. | ||
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| + | Select the chromosome number to retrieve the corresponding Chromosome History page, which provides details on all the updates for that chromosome. Current and past versions of the sequence and annotation are also available on SGD's [https://www.yeastgenome.org/downloads Download site] and at [https://www.ncbi.nlm.nih.gov/genome/?term=txid4932 NCBI]. | ||
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| + | If you are aware of additional sequence or annotation changes that should be made to the reference sequence (S288C), please [mailto:sgd-helpdesk@lists.stanford.edu send a message] to SGD curators. At this time, SGD does not record sequence variation between S288C and other strains of Saccharomyces cerevisiae. See the [[Systematic_Sequencing_Table|Systematic Sequencing Project]] page for more information about the reference sequence. | ||
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{| class="wikitable" style="border-spacing: 2px; border: 1px solid darkgray;" | {| class="wikitable" style="border-spacing: 2px; border: 1px solid darkgray;" | ||
! rowspan="2" style="border: 1px solid black;"| Chromosome History | ! rowspan="2" style="border: 1px solid black;"| Chromosome History | ||
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| style="border: 1px solid black;"| 192 | | style="border: 1px solid black;"| 192 | ||
| style="border: 1px solid black;"| 2011-02-03 | | style="border: 1px solid black;"| 2011-02-03 | ||
| − | | style="border: 1px solid black;"| | + | | style="border: 1px solid black;"| 51 |
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|- | |- | ||
! style="border: 1px solid black;"| [[Chromosome III History| III]] | ! style="border: 1px solid black;"| [[Chromosome III History| III]] | ||
| style="border: 1px solid black;"| 705 | | style="border: 1px solid black;"| 705 | ||
| style="border: 1px solid black;"| 2011-02-03 | | style="border: 1px solid black;"| 2011-02-03 | ||
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|- | |- | ||
! style="border: 1px solid black;"| [[Chromosome IV History| IV]] | ! style="border: 1px solid black;"| [[Chromosome IV History| IV]] | ||
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| style="border: 1px solid black;"| 20 | | style="border: 1px solid black;"| 20 | ||
| style="border: 1px solid black;"| 2011-02-03 | | style="border: 1px solid black;"| 2011-02-03 | ||
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|- | |- | ||
! style="border: 1px solid black;"| [[Chromosome VI History| VI]] | ! style="border: 1px solid black;"| [[Chromosome VI History| VI]] | ||
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| style="border: 1px solid black;"| 125 | | style="border: 1px solid black;"| 125 | ||
| style="border: 1px solid black;"| 2011-02-03 | | style="border: 1px solid black;"| 2011-02-03 | ||
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|- | |- | ||
! style="border: 1px solid black;"| [[Chromosome VIII History| VIII]] | ! style="border: 1px solid black;"| [[Chromosome VIII History| VIII]] | ||
| style="border: 1px solid black;"| 33 | | style="border: 1px solid black;"| 33 | ||
| style="border: 1px solid black;"| 2011-02-03 | | style="border: 1px solid black;"| 2011-02-03 | ||
| − | | style="border: 1px solid black;"| | + | | style="border: 1px solid black;"| 27 |
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|- | |- | ||
! style="border: 1px solid black;"| [[Chromosome IX History| IX]] | ! style="border: 1px solid black;"| [[Chromosome IX History| IX]] | ||
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| style="border: 1px solid black;"| 106 | | style="border: 1px solid black;"| 106 | ||
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|- | |- | ||
! style="border: 1px solid black;"| [[Chromosome XI History| XI]] | ! style="border: 1px solid black;"| [[Chromosome XI History| XI]] | ||
| style="border: 1px solid black;"| 79 | | style="border: 1px solid black;"| 79 | ||
| style="border: 1px solid black;"| 2011-02-03 | | style="border: 1px solid black;"| 2011-02-03 | ||
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! style="border: 1px solid black;"| [[Chromosome XII History| XII]] | ! style="border: 1px solid black;"| [[Chromosome XII History| XII]] | ||
| style="border: 1px solid black;"| 28 | | style="border: 1px solid black;"| 28 | ||
| style="border: 1px solid black;"| 2011-02-03 | | style="border: 1px solid black;"| 2011-02-03 | ||
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! style="border: 1px solid black;"| [[Chromosome XIII History| XIII]] | ! style="border: 1px solid black;"| [[Chromosome XIII History| XIII]] | ||
| style="border: 1px solid black;"| 13 | | style="border: 1px solid black;"| 13 | ||
| style="border: 1px solid black;"| 2011-02-03 | | style="border: 1px solid black;"| 2011-02-03 | ||
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! style="border: 1px solid black;"| [[Chromosome XIV History| XIV]] | ! style="border: 1px solid black;"| [[Chromosome XIV History| XIV]] | ||
| style="border: 1px solid black;"| 43 | | style="border: 1px solid black;"| 43 | ||
| style="border: 1px solid black;"| 2011-02-03 | | style="border: 1px solid black;"| 2011-02-03 | ||
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! style="border: 1px solid black;"| [[Chromosome XV History| XV]] | ! style="border: 1px solid black;"| [[Chromosome XV History| XV]] | ||
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| style="border: 1px solid black;"| 23 | | style="border: 1px solid black;"| 23 | ||
| style="border: 1px solid black;"| 2011-02-03 | | style="border: 1px solid black;"| 2011-02-03 | ||
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|- | |- | ||
! style="border: 1px solid black;"| [[Mitochondrial Genome History| Mitochondrial Genome]] | ! style="border: 1px solid black;"| [[Mitochondrial Genome History| Mitochondrial Genome]] | ||
Latest revision as of 12:46, 21 April 2022
As new data become available, SGD curators update the systematic sequence and its annotation. This table summarizes the sequence and/or annotation updates made for each chromosome, since the intitial release on 1996-07-31.
Select the chromosome number to retrieve the corresponding Chromosome History page, which provides details on all the updates for that chromosome. Current and past versions of the sequence and annotation are also available on SGD's Download site and at NCBI.
If you are aware of additional sequence or annotation changes that should be made to the reference sequence (S288C), please send a message to SGD curators. At this time, SGD does not record sequence variation between S288C and other strains of Saccharomyces cerevisiae. See the Systematic Sequencing Project page for more information about the reference sequence.
| Chromosome History | Sequence Updates | Annotation Updates | ||
|---|---|---|---|---|
| Total Number | Last Update | Total Number | Last Update | |
| I | 115 | 2011-02-03 | 25 | 2014-11-18 |
| II | 192 | 2011-02-03 | 51 | 2021-04-21 |
| III | 705 | 2011-02-03 | 54 | 2021-04-21 |
| IV | 63 | 2011-02-03 | 63 | 2014-11-18 |
| V | 20 | 2011-02-03 | 43 | 2021-04-21 |
| VI | 36 | 2011-02-03 | 24 | 2014-11-18 |
| VII | 125 | 2011-02-03 | 57 | 2021-04-21 |
| VIII | 33 | 2011-02-03 | 27 | 2021-04-21 |
| IX | 9 | 2011-02-03 | 32 | 2014-11-19 |
| X | 106 | 2011-02-03 | 33 | 2021-04-21 |
| XI | 79 | 2011-02-03 | 40 | 2021-04-21 |
| XII | 28 | 2011-02-03 | 39 | 2021-04-21 |
| XIII | 13 | 2011-02-03 | 35 | 2021-04-21 |
| XIV | 43 | 2011-02-03 | 34 | 2021-04-219 |
| XV | 63 | 2011-02-03 | 51 | 2014-11-19 |
| XVI | 23 | 2011-02-03 | 40 | 2021-04-21 |
| Mitochondrial Genome | 0 | N/A | 4 | 2014-11-19 |
