Difference between revisions of "YKL125W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001608 YKL125W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''RRN3 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''RRN3 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XI: | + | |nowrap| Chr XI:208247..210130 |
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| + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000001608 | ||
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| − | '''Description of | + | '''Description of YKL125W:''' Protein required for transcription of rDNA by RNA polymerase I; transcription factor independent of DNA template; involved in recruitment of RNA polymerase I to rDNA; structure reveals unique HEAT repeat fold and a surface serine patch; phosphorylation of serine patch impairs cell growth and reduces RNA polymerase I binding in vitro and RNA polymerase I recruitment to the rDNA gene in vivo<ref name='S000146964'>Blattner C, et al. (2011) Molecular basis of Rrn3-regulated RNA polymerase I initiation and cell growth. Genes Dev () {{SGDpaper|S000146964}} PMID 21940764</ref><ref name='S000059638'>Peyroche G, et al. (2000) The recruitment of RNA polymerase I on rDNA is mediated by the interaction of the A43 subunit with Rrn3. EMBO J 19(20):5473-82 {{SGDpaper|S000059638}} PMID 11032814</ref><ref name='S000053600'>Yamamoto RT, et al. (1996) RRN3 gene of Saccharomyces cerevisiae encodes an essential RNA polymerase I transcription factor which interacts with the polymerase independently of DNA template. EMBO J 15(15):3964-73 |
{{SGDpaper|S000053600}} PMID 8670901</ref> | {{SGDpaper|S000053600}} PMID 8670901</ref> | ||
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==Community Commentary== | ==Community Commentary== | ||
{{CommentaryHelp}} | {{CommentaryHelp}} | ||
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| + | <!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --> | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YKL125W |
| Gene name | RRN3 |
| Aliases | |
| Feature type | ORF, Verified |
| Coordinates | Chr XI:208247..210130 |
| Primary SGDID | S000001608 |
Description of YKL125W: Protein required for transcription of rDNA by RNA polymerase I; transcription factor independent of DNA template; involved in recruitment of RNA polymerase I to rDNA; structure reveals unique HEAT repeat fold and a surface serine patch; phosphorylation of serine patch impairs cell growth and reduces RNA polymerase I binding in vitro and RNA polymerase I recruitment to the rDNA gene in vivo[1][2][3]
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Contents
Community Commentary
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References
See Help:References on how to add references
- ↑ Blattner C, et al. (2011) Molecular basis of Rrn3-regulated RNA polymerase I initiation and cell growth. Genes Dev () SGD PMID 21940764
- ↑ Peyroche G, et al. (2000) The recruitment of RNA polymerase I on rDNA is mediated by the interaction of the A43 subunit with Rrn3. EMBO J 19(20):5473-82 SGD PMID 11032814
- ↑ Yamamoto RT, et al. (1996) RRN3 gene of Saccharomyces cerevisiae encodes an essential RNA polymerase I transcription factor which interacts with the polymerase independently of DNA template. EMBO J 15(15):3964-73 SGD PMID 8670901
See Help:Categories on how to add the wiki page for this gene to a Category </protect>
