What's New in SGD in 2008

From SGD-Wiki
Jump to: navigation, search

Contents

New Summary Paragraphs - December 16, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: CTK1/YKL139W, CTK2/YJL006C, CTK3/YML112W, TDH3/YGR192C.

GO Annotation Information - December 16, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
AAC3/YBR085W ADP1/YCR011C ADY2/YCR010C AGP1/YCL025C AGP2/YBR132C
BAP2/YBR068C CSM4/YPL200W CTP1/YBR291C DAS2/YDR020C DET1/YDR051C
CCM1/YGR150C DTR1/YBR180W ECM38/YLR299W ENA1/YDR040C ENA2/YDR039C
ENA5/YDR038C ERS1/YCR075C GGC1/YDL198C GIT1/YCR098C HXT15/YDL245C
MAL31/YBR298C MPH2/YDL247W NDJ1/YOL104C PCA1/YBR295W PHO87/YCR037C
PHO89/YBR296C PIF1/YML061C QDR3/YBR043C RIM2/YBR192W RMI1/YPL024W
RPS13/YDR064W RPS14B/YJL191W RPS2/YGL123W SEC2/YNL272C SUL1/YBR294W
TAT1/YBR069C TOP3/YLR234W UGA4/YDL210W URN1/YPR152C VBA2/YBR293W
VBA3/YCL069W VCX1/YDL128W VIP1/YLR410W VMA2/YBR127C VMA9/YCL005W-A
VPS36/YLR417W YMC2/YBR104W VHC1/YBR235W YBR241C YDL199C
YGR283C YKL069W YMR310C

New Summary Paragraphs - December 9, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: FPR1/YNL135C

GO Annotation Information - December 9, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
BNI1/YNL271C BNR1/YIL159W DRS2/YAL026C EXO1/YOR033C FRS1/YLR060W
FRS2/YFL022C FUN19/YAL034C FUN26/YAL022C HRD1/YOL013C ILS1/YBL076C
IRE1/YHR079C MAL21 MAL41 MAL61 MID2/YLR332W
MSF1/YPR047W MSH3/YCR092C MST1/YKL194C MSW1/YDR268W NMA111/YNL123W
RPL30/YGL030W RPS10A/YOR293W RPS10B/YMR230W RPS14A/YCR031C RPS14B/YJL191W
RPS15/YOL040C RPS16A/YMR143W RPS16B/YDL083C RPS17A/YML024W RPS17B/YDR447C
RPS18A/YDR450W RPS18B/YML026C RPS1A/YLR441C RPS1B/YML063W RPS2/YGL123W
RPS24A/YER074W RPS24B/YIL069C RPS26A/YGL189C RPS26B/YER131W RPS30A/YLR287C-A
RPS30B/YOR182C RPS31/YLR167W RPS5/YJR123W RPS7A/YOR096W RPS7B/YNL096C
SAE2/YGL175C SDH1/YKL148C SDH2/YLL041C SDH3/YKL141W SGS1/YMR190C
SLT2/YHR030C SNF1/YDR477W SRY1/YKL218C SWI6/YLR182W UBC7/YMR022W
VAS1/YGR094W VOA1/YGR106C YPR1/YDR368W YER156C YGL082W
YGL157W YPL191C

GO Annotation Information - November 25, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
AEP2/YMR282C ALA1/YOR335C CDC33/YOL139C DHH1/YDL160C EAP1/YKL204W
EDC3/YEL015W GBP2/YCL011C HCM1/YCR065W HRP1/YOL123W IFM1/YOL023W
IMG1/YCR046C ISM1/YPL040C LSM4/YER112W MEF1/YLR069C MRP10/YDL045W-A
MRP20/YDR405W MRP21/YBL090W MRP51/YPL118W MRPL10/YNL284C MRPL11/YDL202W
MRPL13/YKR006C MRPL16/YBL038W MRPL19/YNL185C MRPL20/YKR085C MRPL24/YMR193W
MRPL28/YDR462W MRPL32/YCR003W MRPL33/YMR286W MRPL37/YBR268W MRPL39/YML009C
MRPL44/YMR225C MRPL7/YDR237W MRPS18/YNL306W MSD1/YPL104W MSE1/YOL033W
MSK1/YNL073W MSR1/YHR091C NGR1/YBR212W NRP1/YDL167C NUR1/YDL089W
PAB1/YER165W PAT1/YCR077C PBP1/YGR178C PET112/YBL080C PLM2/YDR501W
POG1/YIL122W PPN1/YDR452W PUB1/YNL016W SRC1/YML034W SUC7
SWI4/YER111C TAF14/YPL129W TIF4631/YGR162W TIF4632/YGL049C TOS4/YLR183C
TOS8/YGL096W TYE7/YOR344C YAP5/YIR018W YHP1/YDR451C YML6/YML025C
YOX1/YML027W YGR250C

GO Annotation Information - November 18, 2008

  • During the past week, the GO annotations have been updated for the following features:
DBP3/YGL078C GAL3/YDR009W GRX6/YDL010W GRX7/YBR014C HCA4/YJL033W
IGO1/YNL157W IGO2/YHR132W-A MRP1/YDR347W MRP13/YGR084C MRP17/YKL003C
MRP2/YPR166C MRP4/YHL004W MRP51/YPL118W MRP7/YNL005C MRPL15/YLR312W-A
MRPL17/YNL252C MRPL20/YKR085C MRPL23/YOR150W MRPL25/YGR076C MRPL27/YBR282W
MRPL3/YMR024W MRPL31/YKL138C MRPL35/YDR322W MRPL36/YBR122C MRPL38/YKL170W
MRPL40/YPL173W MRPL49/YJL096W MRPL50/YNR022C MRPL6/YHR147C MRPL8/YJL063C
MRPS12/YNR036C MRPS16/YPL013C MRPS17/YMR188C MRPS28/YDR337W MRPS35/YGR165W
MRPS5/YBR251W MRPS8/YMR158W MRPS9/YBR146W NAM9/YNL137C PET123/YOR158W
PLM2/YDR501W ROK1/YGL171W RRP3/YHR065C RSM10/YDR041W RSM18/YER050C
RSM19/YNR037C RSM22/YKL155C RSM23/YGL129C RSM24/YDR175C RSM25/YIL093C
RSM26/YJR101W RSM27/YGR215W RSM7/YJR113C RTC6/YPL183W-A SUC1
SUC3 SUC4 SUC5 SWS2/YNL081C TOS4/YLR183C
VAR1/Q0140 YNK1/YKL067W YDR115W

GO Annotation Information - November 11, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
AIR1/YIL079C AIR2/YDL175C ALY1/YKR021W ALY2/YJL084C ARC18/YLR370C
ARC40/YBR234C ART5/YGR068C CDC15/YAR019C CSL4/YNL232W CSM2/YIL132C
CSR2/YPR030W CTF18/YMR078C DPB11/YJL090C ECM21/YBL101C FPK1/YNR047W
LDB19/YOR322C LIN1/YHR156C MTR3/YGR158C NOP8/YOL144W PAP2/YOL115W
PSY3/YLR376C RAD4/YER162C ROD1/YOR018W ROG3/YFR022W RRP42/YDL111C
RRP43/YCR035C RRP45/YDR280W RRP46/YGR095C RRP6/YOR001W SHE1/YBL031W
SHU1/YHL006C SHU2/YDR078C SKI3/YPR189W SKI7/YOR076C STB3/YDR169C
STE14/YDR410C STE24/YJR117W TOR1/YJR066W

SGD Quarterly Newsletter - November 5, 2008

  • SGD sends out its quarterly newsletter to colleagues designated as contacts in SGD. An HTML version of the newsletter is available. If you would like to receive this letter in the future please use the SGD Colleague Submission/Update form to let us know.

GO Annotation Information - November 4, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
BFR2/YDR299W CTK1/YKL139W CTK2/YJL006C CTK3/YML112W GEF1/YJR040W
GPM1/YKL152C MOD5/YOR274W MRC1/YCL061C MTC7/YEL033W OCA5/YHL029C
RKM1/YPL208W RKM3/YBR030W RPA190/YOR341W RPB3/YIL021W RSP5/YER125W
SET7/YDR257C SOH1/YGL127C SPO16/YHR153C SPO22/YIL073C SUS1/YBR111W-A
TEL2/YGR099W ZDS1/YMR273C ZDS2/YML109W YCL057C-A YDR109C
YEL008W YMR010W YMR031W-A

GO Annotation Information - October 28, 2008

  • During the past week, the GO annotations have been updated for the following features:
ADD66/YKL206C BUD16/YEL029C BUD31/YCR063W CUS1/YMR240C HSH155/YMR288W
HSH49/YOR319W INO80/YGL150C IST3/YIR005W NMD3/YHR170W ORC2/YBR060C
RDS3/YPR094W RMI1/YPL024W RNA15/YGL044C RSE1/YML049C SLG1/YOR008C
SNF2/YOR290C SPP1/YPL138C SSE1/YPL106C SWA2/YDR320C URE2/YNL229C
YSF3/YNL138W-A YUH1/YJR099W

New and Improved Textpresso - October 23, 2008

  • The SGD full-text literature search capability (powered by Textpresso) has been upgraded and expanded to include publications from 2008. The full-text literature search can be accessed via the Full-text search link on the home page, from a link on the SGD Search Options contents page, and from any Search results page where the search form is prefilled with your search query. The new Textpresso is installed on the first of a series of new servers that are being rolled out at SGD over the next few weeks.

New links to FitDB - October 23, 2008

  • Links to the Yeast Fitness Database (FitDB), a website to view fitness defects in mutant yeast strains in the presence of various chemicals, as described in Hillenmeyer, et al., have been added to the "Phenotype" pull-down menu on the Locus Summary and Phentoype Details pages. Thanks to Maureen Hillenmeyer, Larry Heisler, and Guri Giaever for helping set up these links.

New Summary Paragraphs - October 21, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: RAD9/YDR217C.

Go Annotation Information - October 14, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ADY3/YDL239C ARK1/YNL020C CIA1/YDR267C CIN8/YEL061C DAP1/YPL170W
DYN1/YKR054C KIP1/YBL063W LRP1/YHR081W MGR1/YCL044C MGR3/YMR115W
NSE1/YLR007W PAN1/YIR006C PMA1/YGL008C PRK1/YIL095W RSP5/YER125W
RTN1/YDR233C RTN2/YDL204W SKI6/YGR195W YME1/YPR024W YER163C

New Summary Paragraphs - October 7, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: YFH1/YDL120W.

GO Annotation Information - October 7, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ABC1/YGL119W ACK1/YDL203C BRN1/YBL097W CRD1/YDL142C CSL4/YNL232W
DIS3/YOL021C EFB1/YAL003W ICE2/YIL090W IRE1/YHR079C KRI1/YNL308C
KRR1/YCL059C MTR3/YGR158C MTR4/YJL050W NQM1/YGR043C RNT1/YMR239C
RRP4/YHR069C RRP40/YOL142W RRP42/YDL111C RRP43/YCR035C RRP45/YDR280W
RRP46/YGR095C RRP6/YOR001W SCS2/YER120W SDH1/YKL148C SDH2/YLL041C
SKI2/YLR398C SKI3/YPR189W SKI6/YGR195W SKI8/YGL213C SMC2/YFR031C
SMC4/YLR086W SRM1/YGL097W SWA2/YDR320C TEF1/YPR080W TEF2/YBR118W
YCG1/YDR325W YCS4/YLR272C YFH1/YDL120W

GO Annotation Information - September 30, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ARP4/YJL081C ATG18/YFR021W ATG21/YPL100W BEM3/YPL115C CRF1/YDR223W
DBF2/YGR092W DNM1/YLL001W FIS1/YIL065C GCN2/YDR283C HSV2/YGR223C
IES6/YEL044W MDM30/YLR368W MPP6/YNR024W MPS1/YDL028C RCE1/YMR274C
RFT1/YBL020W RGA1/YOR127W RGA2/YDR379W RPN13/YLR421C RPN14/YGL004C
RPS13/YDR064W RPS14A/YCR031C RPS2/YGL123W RPS20/YHL015W RPS3/YNL178W
RPS4A/YJR145C RPS4B/YHR203C RPS5/YJR123W RPS6A/YPL090C RPS6B/YBR181C
RPS8A/YBL072C RPS8B/YER102W RPS9A/YPL081W RPS9B/YBR189W RRP40/YOL142W
SDH1/YKL148C SDH2/YLL041C SDH3/YKL141W SDH4/YDR178W TFP1/YDL185W
VMA2/YBR127C VPH1/YOR270C YKU70/YMR284W YME1/YPR024W YJL045W
YKL151C YLR414C

GO Annotation Information - September 23, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ADE12/YNL220W ADE4/YMR300C BRE2/YLR015W BUB1/YGR188C CDC13/YDL220C
CTF18/YMR078C DCC1/YCL016C DIS3/YOL021C ECM22/YLR228C EST1/YLR233C
EST3/YIL009C-A MRC1/YCL061C RPS0A/YGR214W RPS0B/YLR048W RPS11A/YDR025W
RPS11B/YBR048W RPS12/YOR369C RPS22A/YJL190C RPS22B/YLR367W RPS23A/YGR118W
RPS23B/YPR132W RPS25A/YGR027C RPS25B/YLR333C RPS29A/YLR388W RPS29B/YDL061C
RRP4/YHR069C RRP42/YDL111C RRP43/YCR035C SDC1/YDR469W SET1/YHR119W
SGO1/YOR073W SHG1/YBR258C SKI6/YGR195W SPP1/YPL138C SUR7/YML052W
SWD1/YAR003W SWD2/YKL018W SWD3/YBR175W SYP1/YCR030C UPC2/YDR213W
YFH1/YDL120W

Biochemical Pathways Wall Poster - September 22, 2008

  • The Biochemical Pathways poster on display at the 2008 YGMB meeting in Toronto can be downloaded from the Biochemical Pathways page. The poster can be printed for easy viewing as a wall chart. In addition, the Yeast Biochemical Pathways have been upgraded to Pathway Tools version 12.0. The yeastcyc12.0 data files that can be used with version 12.0 and the biochemical_pathways.tab file can be downloaded from SGD's FTP site.

New Summary Paragraphs - September 16, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: AGX1/YFL030W and MDH1/YKL085W.

GO Annotation Information - September 16, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
AAC1/YMR056C AAC3/YBR085W ARP7/YPR034W ARP9/YMR033W BUD6/YLR319C
CBK1/YNL161W CMS1/YLR003C DOT1/YDR440W ELM1/YKL048C EMI5/YOL071W
GET1/YGL020C GET2/YER083C GET3/YDL100C GIC1/YHR061C GIC2/YDR309C
GIN4/YDR507C HHF1/YBR009C HHF2/YNL030W HSL1/YKL101W HTL1/YCR020W-B
IPL1/YPL209C ISU1/YPL135W LDB7/YBL006C MDH2/YOL126C MRD1/YPR112C
MRP8/YKL142W NAP1/YKR048C NFS1/YCL017C NPL6/YMR091C PAN1/YIR006C
PEF1/YGR058W PET9/YBL030C PFY1/YOR122C POP1/YNL221C POP3/YNL282W
POP4/YBR257W POP5/YAL033W POP6/YGR030C POP7/YBR167C POP8/YBL018C
RAD18/YCR066W RFA1/YAR007C RFA2/YNL312W RFA3/YJL173C RPP1/YHR062C
RPR1 RPR2/YIR015W RSC1/YGR056W RSC2/YLR357W RSC3/YDR303C
RSC30/YHR056C RSC4/YKR008W RSC58/YLR033W RSC6/YCR052W RSC8/YFR037C
RSC9/YML127W RTT10/YPL183C RTT102/YGR275W SAS10/YDL153C SFH1/YLR321C
SIS1/YNL007C SLI15/YBR156C SLY1/YDR189W SRB2/YHR041C SRL4/YPL033C
STH1/YIL126W UTP21/YLR409C UTP30/YKR060W VPS75/YNL246W YAH1/YPL252C
YFH1/YDL120W YPT1/YFL038C YNL313C YOR251C

New Summary Paragraphs - September 9, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Updated During the Past Week
SEN15/YMR059W SEN2/YLR105C SEN34/YAR008W SEN54/YPL083C TRL1/YJL087C

GO Annotation Information - September 9, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
AAT1/YKL106W ADK1/YDR226W AIM28/YKR016W ATP1/YBL099W ATP14/YLR295C
ATP15/YPL271W ATP16/YDL004W ATP17/YDR377W ATP2/YJR121W ATP3/YBR039W
ATP4/YPL078C ATP6/Q0085 ATP7/YKL016C CAT2/YML042W CPR1/YDR155C
DAP2/YHR028C ESP1/YGR098C EXO70/YJL085W FMT1/YBL013W GDH1/YOR375C
GDH3/YAL062W GLT1/YDL171C GUF1/YLR289W GUT2/YIL155C HOP1/YIL072W
HOS2/YGL194C HOS4/YIL112W HST1/YOL068C KSP1/YHR082C MAG2/YLR427W
MDH1/YKL085W MEK1/YOR351C NOP9/YJL010C OLI1/Q0130 PLP1/YDR183W
PLP2/YOR281C POL2/YNL262W POL4/YCR014C PRP40/YKL012W RMD11/YHL023C
SEC3/YER008C SET3/YKR029C SHR5/YOL110W SIF2/YBR103W SKS1/YPL026C
SNT1/YCR033W SWT21/YNL187W TAH18/YPR048W TRR1/YDR353W URA6/YKL024C
YAT1/YAR035W YAT2/YER024W YFH1/YDL120W YKU80/YMR106C YHL008C
YPL225W

GO Annotation Information - September 2, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ARE1/YCR048W ARE2/YNR019W ASF1/YJL115W ATG1/YGL180W ATG10/YLL042C
ATG11/YPR049C ATG12/YBR217W ATG13/YPR185W ATG14/YBR128C ATG15/YCR068W
ATG16/YMR159C ATG17/YLR423C ATG18/YFR021W ATG2/YNL242W ATG21/YPL100W
ATG29/YPL166W ATG3/YNR007C ATG4/YNL223W ATG5/YPL149W ATG7/YHR171W
ATG8/YBL078C ATG9/YDL149W CIS1/YDR022C CTK1/YKL139W CTK2/YJL006C
CTK3/YML112W DOT1/YDR440W DUG1/YFR044C DUG2/YBR281C DUG3/YNL191W
ESP1/YGR098C GCN5/YGR252W GDH3/YAL062W GRX6/YDL010W GRX7/YBR014C
GSG1/YDR108W HHF1/YBR009C HHF2/YNL030W MTQ2/YDR140W NAP1/YKR048C
RAD52/YML032C RPS2/YGL123W RTT109/YLL002W SAS2/YMR127C SEC17/YBL050W
SEC18/YBR080C SEN15/YMR059W SEN2/YLR105C SEN34/YAR008W SEN54/YPL083C
SIR3/YLR442C SNX4/YJL036W SUS1/YBR111W-A TOP2/YNL088W TRM112/YNR046W
VAC8/YEL013W VAM3/YOR106W VAM6/YDL077C VAM7/YGL212W VPS30/YPL120W
VPS33/YLR396C VPS41/YDR080W VPS75/YNL246W YPT7/YML001W

New Summary Paragraphs - August 26, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Updated During the Past Week
ADH1/YOL086C ADH2/YMR303C ADH3/YMR083W ADH5/YBR145W ADH6/YMR318C
ADH7/YCR105W AST1/YBL069W AST2/YER101C BDH1/YAL060W BDH2/YAL061W
ETR1/YBR026C PEX10/YDR265W SFA1/YDL168W SOR1/YJR159W SOR2/YDL246C
XYL2/YLR070C YIM1/YMR152W ZTA1/YBR046C YCR102C YLR460C
YML131W YNL134C

GO Annotation Information - August 26, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ACM1/YPL267W AHP1/YLR109W ALG12/YNR030W ALG13/YGL047W APE2/YKL157W
ATP1/YBL099W ATP15/YPL271W ATP16/YDL004W ATP2/YJR121W ATP23/YNR020C
ATP3/YBR039W ATP4/YPL078C ATP5/YDR298C ATP6/Q0085 ATP7/YKL016C
ATS1/YAL020C BRX1/YOL077C CAB1/YDR531W CGR1/YGL029W CHD1/YER164W
CIA1/YDR267C CIC1/YHR052W CPS1/YJL172W DML1/YMR211W DOT5/YIL010W
DUG1/YFR044C DUG2/YBR281C DUG3/YNL191W EBP2/YKL172W ECO1/YFR027W
ENP2/YGR145W ERB1/YMR049C ERG29/YMR134W FCF2/YLR051C GAS1/YMR307W
GDH1/YOR375C GPI19/YDR437W GRX1/YCL035C GRX2/YDR513W GWT1/YJL091C
HAS1/YMR290C HPR1/YDR138W ICP55/YER078C IMP1/YMR150C IMP2/YMR035W
INN1/YNL152W IPI3/YNL182C JIP5/YPR169W KEI1/YDR367W KEX1/YGL203C
LAP4/YKL103C LIP1/YMR298W LOC1/YFR001W MAP1/YLR244C MAP2/YBL091C
MAS1/YLR163C MAS2/YHR024C MCA1/YOR197W MDH1/YKL085W MKC7/YDR144C
MMS4/YBR098W MPP6/YNR024W MRT4/YKL009W NAM7/YMR080C NIP7/YPL211W
NOG1/YPL093W NOG2/YNR053C NOP15/YNL110C NOP16/YER002W NOP2/YNL061W
NSA1/YGL111W NSA2/YER126C NSE3/YDR288W NSE5/YML023C NUS1/YDL193W
OAC1/YKL120W OCT1/YKL134C PAM18/YLR008C PAN2/YGL094C PAN3/YKL025C
PEP4/YPL154C PEX10/YDR265W PGA1/YNL158W PGA2/YNL149C PHS1/YJL097W
PRC1/YMR297W PRX1/YBL064C RCE1/YMR274C RIX1/YHR197W RLP24/YLR009W
RLP7/YNL002C RMP1/YLR145W RPF1/YHR088W RPF2/YKR081C RRP1/YDR087C
RRS1/YOR294W RSP5/YER125W RTT106/YNL206C SAC3/YDR159W SEC11/YIR022W
SEC39/YLR440C SEN15/YMR059W SEN2/YLR105C SEN34/YAR008W SEN54/YPL083C
SPC3/YLR066W SPP382/YLR424W SUB2/YDL084W SWC4/YGR002C THO2/YNL139C
THP1/YOL072W TIF6/YPR016C TRM112/YNR046W TRR1/YDR353W TRR2/YHR106W
TRX1/YLR043C TRX2/YGR209C TRZ1/YKR079C TSA1/YML028W TSA2/YDR453C
UBP3/YER151C UPF3/YGR072W USV1/YPL230W UTP11/YKL099C UTP14/YML093W
UTP23/YOR004W UTP5/YDR398W YPP1/YGR198W YTM1/YOR272W YBL028C
YBR139W YDR196C YFR006W YGR277C YHR113W
YHR122W YIL083C YJR012C YJR136C YJR141W
YKL088W YLR132C YLR243W YML131W YNL181W
YNL260C YOL057W YOR060C YOR251C

GO Annotation Information - August 19, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
CCR4/YAL021C CDC10/YCR002C CDC11/YJR076C CDC12/YHR107C CDC3/YLR314C
DDC1/YPL194W DOM34/YNL001W DPB11/YJL090C DST1/YGL043W DYN2/YDR424C
FRQ1/YDR373W FYV10/YIL097W GAP1/YKR039W GAR1/YHR089C GDH1/YOR375C
GDT1/YBR187W GID7/YCL039W GID8/YMR135C HER1/YOR227W HER2/YMR293C
HRD3/YLR207W IME4/YGL192W MEC3/YLR288C NOP1/YDL014W NOP58/YOR310C
POP2/YNR052C PUT4/YOR348C RAD17/YOR368W RAD24/YER173W RDS3/YPR094W
RFC2/YJR068W RFC3/YNL290W RFC4/YOL094C RFC5/YBR087W RMD5/YDR255C
RRP4/YHR069C RXT3/YDL076C SDS22/YKL193C SHS1/YDL225W SIK1/YLR197W
SNR128/snR128 SNR13/snR13 SNR17B/snR17b SNR18/snR18 SNR190/snR190
SNR24/snR24 SNR4/snR4 VID24/YBR105C VID28/YIL017C VID30/YGL227W
YIL091C

New Summary Paragraphs - August 12, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Updated During the Past Week
MET13/YGL125W SCR1 SEC65/YML105C SRP14/YDL092W SRP21/YKL122C
SRP54/YPR088C SRP68/YPL243W SRP72/YPL210C

GO Annotation Information - August 12, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ACM1/YPL267W ATG13/YPR185W ATG23/YLR431C AUR1/YKL004W CCR4/YAL021C
CHK1/YBR274W CRM1/YGR218W DOT1/YDR440W HSP10/YOR020C HSP60/YLR259C
JLP1/YLL057C LSM2/YBL026W LSM4/YER112W LSM6/YDR378C MET12/YPL023C
MET13/YGL125W NTE1/YML059C POP2/YNR052C PPX1/YHR201C PRP24/YMR268C
RET2/YFR051C SPC72/YAL047C SSN2/YDR443C THI4/YGR144W YPT1/YFL038C
YPT11/YNL304W

New Summary Paragraphs - August 5, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: ATG8/YBL078C.

GO Annotation Information - August 5, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ARA1/YBR149W CHS7/YHR142W CSM4/YPL200W DNL4/YOR005C EST2/YLR318W
GCY1/YOR120W [1] GSF2/YML048W HOM3/YER052C IVY1/YDR229W
KTI11/YBL071W-A MET12/YPL023C MET13/YGL125W MPS3/YJL019W MRC1/YCL061C
NAF1/YNL124W NDJ1/YOL104C NUS1/YDL193W PGA2/YNL149C PHO86/YJL117W
PHS1/YJL097W PMR1/YGL167C RAD61/YDR014W RNA1/YMR235C RNR1/YER070W
RNR2/YJL026W RNR3/YIL066C RNR4/YGR180C RPO41/YFL036W SHQ1/YIL104C
SYT1/YPR095C TAR1/YLR154W-C TMA29/YMR226C TOF1/YNL273W VPS74/YDR372C
YPR1/YDR368W YDL124W YGL039W YJR096W

SGD Quarterly Newsletter - July 31, 2008

  • SGD sends out its quarterly newsletter to colleagues designated as contacts in SGD. An HTML version of the newsletter is available. If you would like to receive this letter in the future please use the Colleague Submission/Update form to let us know.

GO Annotation Information - July 29, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
BLM10/YFL007W CDC14/YFR028C DRE2/YKR071C ERP3/YDL018C ERP4/YOR016C
ERP5/YHR110W ERP6/YGL002W LOH1/YJL038C MDE1/YJR024C NUS1/YDL193W
PHS1/YJL097W POL31/YJR006W POL32/YJR043C PRE4/YFR050C RPN2/YIL075C
SEC39/YLR440C SEC65/YML105C SLM1/YIL105C SLM2/YNL047C SML1/YML058W
SOR2/YDL246C SRP54/YPR088C TAF1/YGR274C TAF10/YDR167W TAF11/YML015C
TAF12/YDR145W TAF13/YML098W TAF4/YMR005W TAF6/YGL112C TAF7/YMR227C
TAF8/YML114C TAF9/YMR236W TOF2/YKR010C TRA1/YHR099W ULS1/YOR191W
UTR4/YEL038W XYL2/YLR070C

MORE Functional Predictions Available as GO Annotations - July 23, 2008

  • SGD has incorporated computational GO annotations from a method published in Tian et. al., G enome Biology 2008 that combines guilt-by-profiling and guilt-by-association analysis to infer gene function. These data can be viewed in the computational GO annotation section (for example, see GO annotations for YCR041 W). Links to gene pages at the YeastFunc viewer are available on the GO Annotation details page in the 'Assigned By' column and in the 'Functional Analysis' pull-down on the righthand side of the Locus Summary pages. Thanks to Weidong Tian, John Beaver , and Fritz Roth for working with SGD on incorporating these data and links.

New Summary Paragraphs - July 22, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Added During the Past Week
BFR2/YDR299W BMS1/YPL217C BUD21/YOR078W DBP8/YHR169W DIM1/YPL266W
DIP2/YLR129W ECM16/YMR128W EMG1/YLR186W ENP1/YBR247C ENP2/YGR145W
FCF1/YDR339C HAS1/YMR290C IMP3/YHR148W IMP4/YNL075W KRE33/YNL132W
KRR1/YCL059C MPP10/YJR002W MRD1/YPR112C NAN1/YPL126W NOC4/YPR144C
NOP14/YDL148C NOP9/YJL010C PNO1/YOR145C PWP2/YCR057C RCL1/YOL010W
ROK1/YGL171W RRP12/YPL012W RRP5/YMR229C SAS10/YDL153C SCL1/YGL011C
SLX9/YGR081C SNR17A/snR17a SNR17B/snR17b SNU13/YEL026W SOF1/YLL011W
TSR1/YDL060W UTP10/YJL109C UTP11/YKL099C UTP13/YLR222C UTP14/YML093W
UTP15/YMR093W UTP18/YJL069C UTP20/YBL004W UTP21/YLR409C UTP22/YGR090W
UTP23/YOR004W UTP30/YKR060W UTP4/YDR324C UTP5/YDR398W UTP6/YDR449C
UTP7/YER082C UTP8/YGR128C UTP9/YHR196W YLR003C

GO Annotation Information - July 22, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
AHA1/YDR214W AHC2/YCR082W AIP1/YMR092C ARP7/YPR034W ARP9/YMR033W
ARR1/YPR199C ASE1/YOR058C ATG15/YCR068W ATG3/YNR007C ATG4/YNL223W
ATG8/YBL078C BBC1/YJL020C BSP1/YPR171W COQ4/YDR204W CRN1/YLR429W
DCN1/YLR128W EAP1/YKL204W ECO1/YFR027W ENA1/YDR040C ERG6/YML008C
EST3/YIL009C-A FYV4/YHR059W GAR1/YHR089C GCN2/YDR283C HIT1/YJR055W
HOC1/YJR075W HSL7/YBR133C HSP10/YOR020C HSP60/YLR259C LAS17/YOR181W
LDB19/YOR322C MAF1/YDR005C MDM20/YOL076W MGM1/YOR211C MKS1/YNL076W
MKT1/YNL085W MNN9/YPL050C MRPL32/YCR003W MYO3/YKL129C MYO5/YMR109W
NHP2/YDL208W NOB1/YOR056C NOP10/YHR072W-A PET191/YJR034W RLM1/YPL089C
RRP43/YCR035C RSC1/YGR056W RSC2/YLR357W RSC3/YDR303C RSC30/YHR056C
RSC4/YKR008W RSC6/YCR052W RSC8/YFR037C RSC9/YML127W RTC1/YOL138C
SFH1/YLR321C SHE2/YKL130C SHE3/YBR130C SMD1/YGR074W SNF3/YDL194W
SNT1/YCR033W SOR1/YJR159W STH1/YIL126W UBA1/YKL210W UFD2/YDL190C
VAN1/YML115C VTS1/YOR359W WHI2/YOR043W XDJ1/YLR090W YBR284W
YDL118W YDL124W YDR532C YEL057C YGL039W
YGR042W YGR160W YHL012W YOR008C-A YPL041C

Expanded Phenotype Data and New Curation System - July 17, 2008

  • SGD is now releasing our improved and expanded mutant phenotype pages. Over the past year, we re-curated existing mutant phenotypes and added more phenotype data, both using a new controlled-vocabulary system. The implementation of this system greatly increases the amount of detailed information that can be captured for each phenotype, and facilitates searching and comparison of mutant phenotypes. Each phenotype annotation contains a term representing the entity or process that is observed (e.g., sporulation efficiency, carbon source utilization, cell size) and a qualifier that describes the effect on that entity or process in the mutant (e.g., decreased, increased, abnormal). Additional fields display information such as strain background, allele name, conditions under which the phenotype is observed, or the identity of relevant chemicals. A brief version of the phenotype is displayed on the Locus Summary page for each gene, and the complete information is accessible via the 'Phenotype' tab at the top of the page (for example, see WHI3). SGD now contains more than 25,000 phenotype annotations, nearly double the previous number, and we will continue to build upon this annotation with the aim of providing comprehensive phenotype information. All of the information is searchable and may also be downloaded in bulk using SGD's Batch Download tool or FTP site.

Functional Predictions Available as GO Annotations - July 17, 2008

  • SGD has incorporated computational GO annotations from the functional predictions based on the analysis of multiple high-throughput datasets published in Huttenhower and Troyanskaya, 2008. This method is described further in Myers et al., 2005, Myers et al., 2007, and Huttenhower et al., 2006. These data can be viewed in the computational GO annotation section (for example, see GO annotations for YDL156W). Thanks to Curtis Huttenhower and Olga Troyanskaya for working with SGD on incorporating these data.

Improvements to the SGD Search - July 17, 2008

  • The SGD Quick Search has been expanded to retrieve information from 14 major categories including: names, descriptions, functional information, phenotype data, colleagues, authors, and external IDs. Results are now organized under topic headings that group similar types of information. This basic search is accessible from the top of most SGD pages, as well as from the Search Options page.

Improved Display, Sorting and Filtering of Interaction Data - July 17, 2008

  • The Interactions page has been updated to allow physical and genetic interactions to be sorted and filtered based on an experimental method, reference, or phenotype. This table also includes notes about the interaction as well as the annotation type to facilitate the identification of high-throughput datasets. SGD now includes 121,580 curated physical and genetic interactions from the BioGRID version 2.0.42 release. New interactions are added on a monthly basis. These data are available over the web and via bulk download through both BioGRID and a new FTP file at SGD.

New Summary Paragraphs - July 15, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Added During the Past Week
AIM10/YER087W ALA1/YOR335C CDC60/YPL160W DED81/YHR019C DIA4/YHR011W
DPS1/YLL018C FRS1/YLR060W FRS2/YFL022C GLN4/YOR168W GRS1/YBR121C
GRS2/YPR081C GUS1/YGL245W HTS1/YPR033C ILS1/YBL076C ISM1/YPL040C
KRS1/YDR037W MES1/YGR264C MSD1/YPL104W MSE1/YOL033W MSF1/YPR047W
MSK1/YNL073W MSM1/YGR171C MSR1/YHR091C MST1/YKL194C MSW1/YDR268W
MSY1/YPL097W NAM2/YLR382C SES1/YDR023W SLM5/YCR024C THS1/YIL078W
TYS1/YGR185C VAS1/YGR094W WRS1/YOL097C YDR341C YHR020W
YNL247W

GO Annotation Information - July 15, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
CDC55/YGL190C FOL2/YGR267C MPS1/YDL028C MPS2/YGL075C NOP1/YDL014W
NOP58/YOR310C POL3/YDL102W RRP9/YPR137W SAL1/YNL083W SDA1/YGR245C
SIK1/YLR197W SNR17A/snR17a SNU13/YEL026W SWE1/YJL187C THS1/YIL078W
VPS74/YDR372C

New Summary Paragraphs - July 8, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: CTA1/YDR256C

GO Annotation Informations - July 8, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
CBP3/YPL215W CBP4/YGR174C CDC1/YDR182W DEG1/YFL001W ESF2/YNR054C
INP51/YIL002C INP52/YNL106C INP53/YOR109W INP54/YOL065C MDM30/YLR368W
NOP1/YDL014W PRE1/YER012W PRE2/YPR103W PUS1/YPL212C
PUS2/YGL063W PUS4/YNL292W PUS9/YDL036C QCR7/YDR529C RIB2/YOL066C
ROT1/YMR200W RPL30/YGL030W RPT6/YGL048C RRP9/YPR137W SAC3/YDR159W
SNR45/snR45 SNR63/snR63 SNU13/YEL026W SRP54/YPR088C STM1/YLR150W
TCM62/YBR044C UTP21/YLR409C UTP4/YDR324C UTP8/YGR128C UTP9/YHR196W
VPS74/YDR372C

New Summary Paragraphs - July 1, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Added During the Past Week
FIG4/YNL325C GCV3/YAL044C MSS4/YDR208W SAC1/YKL212W SOD2/YHR008C
YMR1/YJR110W

GO Annotation Information - July 1, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ATG14/YBR128C BRE5/YNR051C CMC1/YKL137W COA1/YIL157C COX12/YLR038C
COX17/YLL009C COX19/YLL018C-A COX20/YDR231C KRE33/YNL132W KRR1/YCL059C
KRS1/YDR037W MUB1/YMR100W PAP2/YOL115W PEP1/YBL017C PET100/YDR079W
PET117/YER058W PET191/YJR034W PET309/YLR067C POL30/YBR088C PRE10/YOR362C
PRE3/YJL001W PRE4/YFR050C PRE5/YMR314W PRE6/YOL038W PRE8/YML092C
PRE9/YGR135W PUP1/YOR157C PUP2/YGR253C RPN1/YHR027C RPN11/YFR004W
RPN12/YFR052W RPN13/YLR421C RPN2/YIL075C RPN5/YDL147W RPN6/YDL097C
RPN8/YOR261C RPN9/YDR427W RPP0/YLR340W RPS0A/YGR214W RPS11A/YDR025W
RPS11B/YBR048W RPS13/YDR064W RPS14A/YCR031C RPS16A/YMR143W RPS1A/YLR441C
RPS1B/YML063W RPS3/YNL178W RPS4A/YJR145C RPS4B/YHR203C RPS5/YJR123W
RPS6A/YPL090C RPS7A/YOR096W RPS8A/YBL072C RPS8B/YER102W RPS9A/YPL081W
RPS9B/YBR189W RPT6/YGL048C RTT109/YLL002W SCL1/YGL011C SEM1/YDR363W-A
SHY1/YGR112W SNR128/snR128 SNR17A/snR17a SNR17B/snR17b SOD2/YHR008C
SSE1/YPL106C UBP3/YER151C UBR2/YLR024C VPS30/YPL120W VPS38/YLR360W
VPS75/YNL246W VTS1/YOR359W YOL057W

New Summary Paragraphs - June 24, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:MDJ1/YFL016C and VPS34/YLR240W.

GO Annotation Information - June 17, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations
BFR2/YDR299W CTA1/YDR256C PUS7/YOR243C REX2/YLR059C REX3/YLR107W
REX4/YOL080C RFM1/YOR279C RMD5/YDR255C RNH70/YGR276C RRP6/YOR001W
SNR43/snR43 SNU13/YEL026W SUM1/YDR310C TRZ1/YKR079C

New Summary Paragraphs - June 10, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Added During the Week
INP51/YIL002C INP52/YNL106C INP53/YOR109W INP54/YOL065C LSB6/YJL100W
NFU1/YKL040C PIK1/YNL267W STT4/YLR305C

GO Annotation Information - June 10, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations
ACM1/YPL267W AIM1/YAL046C AIM33/YML087C ATG11/YPR049C ATG15/YCR068W
ATG20/YDL113C ATG21/YPL100W ATG23/YLR431C ATG27/YJL178C CAF20/YOR276W
CKA1/YIL035C CKA2/YOR061W CKB1/YGL019W CKB2/YOR039W DCD1/YHR144C
DEM1/YBR163W DGK1/YOR311C DIP2/YLR129W DRE2/YKR071C EAR1/YMR171C
ESF2/YNR054C FAB1/YFR019W FIG4/YNL325C FMP37/YGL080W FYV10/YIL097W
GCV3/YAL044C GEM1/YAL048C GID7/YCL039W GID8/YMR135C GTR1/YML121W
GTR2/YGR163W HGH1/YGR187C HSF1/YGL073W HUL5/YGL141W IMP3/YHR148W
IMP4/YNL075W INH1/YDL181W INP51/YIL002C INP52/YNL106C INP53/YOR109W
INP54/YOL065C IRC21/YMR073C LRC3/YKL207W LSB6/YJL100W LTV1/YKL143W
MAL22 MAL42 MDJ1/YFL016C MEH1/YKR007W MGE1/YOR232W
MMR1/YLR190W MPP10/YJR002W MSS4/YDR208W NAN1/YPL126W PGA3/YML125C
PGC1/YPL206C PIK1/YNL267W PUF3/YLL013C PWP2/YCR057C REX2/YLR059C
REX3/YLR107W RMD5/YDR255C RNH70/YGR276C RRP7/YCL031C SAC1/YKL212W
SEC3/YER008C SIR3/YLR442C SLM4/YBR077C SNO1/YMR095C SNX3/YOR357C
SNX4/YJL036W SPO14/YKR031C SSC1/YJR045C SSH4/YKL124W STF1/YDL130W-A
STF2/YGR008C STT4/YLR305C SWC4/YGR002C UBC8/YEL012W UBP14/YBR058C
UFD2/YDL190C UTP10/YJL109C UTP13/YLR222C UTP15/YMR093W UTP18/YJL069C
UTP21/YLR409C UTP22/YGR090W UTP4/YDR324C UTP5/YDR398W UTP6/YDR449C
UTP8/YGR128C UTP9/YHR196W VPS34/YLR240W YMR1/YJR110W YPT11/YNL304W
YHR122W YLL023C YLR064W YOR164C YOR262W

Sequence and Annotation Updates - June 6, 2008

GO Annotation Information - June 3, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ATG16/YMR159C ATG17/YLR423C ATG18/YFR021W ATG19/YOL082W ATG20/YDL113C
ATG21/YPL100W ATG22/YCL038C ATG23/YLR431C ATG27/YJL178C ATG29/YPL166W
CIS1/YDR022C GRX1/YCL035C GRX2/YDR513W GRX3/YDR098C GRX4/YER174C
GRX5/YPL059W GVP36/YIL041W PRP8/YHR165C RNH1/YMR234W RNH201/YNL072W
SMY2/YBR172C SNU114/YKL173W SNX4/YJL036W SPT20/YOL148C TRX1/YLR043C
TRX2/YGR209C TRX3/YCR083W VPS15/YBR097W VPS30/YPL120W VPS34/YLR240W
YBP2/YGL060W

GO Annotation Information - May 27, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ATG13/YPR185W ATG14/YBR128C CDC5/YMR001C MATALPHA2/YCR039C MBP1/YDL056W
MPP10/YJR002W MRD1/YPR112C NFU1/YKL040C PGC1/YPL206C RCL1/YOL010W
REX2/YLR059C REX3/YLR107W REX4/YOL080C RNH70/YGR276C RPN13/YLR421C
RRP5/YMR229C RTR1/YER139C SSQ1/YLR369W SWI4/YER111C SWI6/YLR182W
VPS15/YBR097W VPS30/YPL120W VPS34/YLR240W VPS38/YLR360W

GO Annotation Information - May 20, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ARP7/YPR034W ARP9/YMR033W ATG1/YGL180W ATG10/YLL042C ATG11/YPR049C
ATG12/YBR217W ATG13/YPR185W ATG16/YMR159C ATG17/YLR423C ATG2/YNL242W
ATG3/YNR007C ATG4/YNL223W ATG5/YPL149W ATG7/YHR171W ATG8/YBL078C
ATG9/YDL149W DBP8/YHR169W ERG2/YMR202W ESF2/YNR054C PNO1/YOR145C
RNR1/YER070W RRD1/YIL153W SLX9/YGR081C SNF12/YNR023W SNF2/YOR290C
SNF5/YBR289W SNF6/YHL025W SWI1/YPL016W SWI3/YJL176C SWP82/YFL049W
URA10/YMR271C URA3/YEL021W URA5/YML106W URC2/YDR520C VMA22/YHR060W

New Summary Paragraphs - May 13, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Added During the Past Week
FAB1/YFR019W FIG4/YNL325C INP51/YIL002C INP52/YNL106C INP53/YOR109W
INP54/YOL065C LSB6/YJL100W MSS4/YDR208W PIK1/YNL267W SAC1/YKL212W
SOD1/YJR104C STT4/YLR305C VPS34/YLR240W YMR1/YJR110W

GO Annotation Information - May 13, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ATP1/YBL099W ATP15/YPL271W ATP16/YDL004W ATP2/YJR121W ATP3/YBR039W
BRR2/YER172C CAF20/YOR276W CTF18/YMR078C CTF4/YPR135W DDP1/YOR163W
DHH1/YDL160C ECO1/YFR027W EMP70/YLR083C HSD1/YOR311C HUL5/YGL141W
LSR1 MCD1/YDL003W MER1/YNL210W MUD2/YKL074C NAG1/YGR031C-A
NAM8/YHR086W NTR2/YKR022C PHS1/YJL097W PLC1/YPL268W PPM2/YOL141W
PRP16/YKR086W PRP2/YNR011C PRP22/YER013W PRP28/YDR243C PRP38/YGR075C
PRP43/YGL120C PRP5/YBR237W PUG1/YER185W SFA1/YDL168W SNF2/YOR290C
SNF5/YBR289W SNF6/YHL025W SNR19/snR19 SNR7-L/snR7-L SNR7-S/snR7-S
SPP382/YLR424W SQS1/YNL224C SUB2/YDL084W SWI1/YPL016W SWI3/YJL176C
THS1/YIL078W TMN2/YDR107C TMN3/YER113C TPI1/YDR050C TRM12/YML005W
TYW3/YGL050W UBP6/YFR010W

New Summary Paragraphs - May 6, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: DDP1/YOR163W and PLC1/YPL268W

GO Annotation Information - May 6, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
BTT1/YDR252W CMC1/YKL137W GAL1/YBR020W GAL10/YBR019C GAL7/YBR018C
GCY1/YOR120W GET3/YDL100C GRE3/YHR104W PAU5/YFL020C PET127/YOR017W
PRS1/YKL181W PRS2/YER099C PRS3/YHL011C PRS4/YBL068W PRS5/YOL061W
RRP15/YPR143W SAE2/YGL175C SNR7-L/snR7-L SNR7-S/snR7-S SPT6/YGR116W
VPS55/YJR044C VPS68/YOL129W YPR1/YDR368W YDL124W YJR096W

SGD Quarterly Newsletter - April 30, 2008

  • SGD sends out its quarterly newsletter to colleagues designated as contacts in SGD. An HTML version of the newsletter is available. If you would like to receive this letter in the future please use the Colleague Submission/Update form to let us know.

New Gene Ontology (GO) Evidence Codes - April 29, 2008

  • The Gene Ontology Consortium (GOC) has added three new subcodes for the ISS (Inferred from Sequence or Structural Similarity) evidence code in order to distinguish the types of sequence-based methods used as evidence in making annotations: Inferred from Sequence Alignment (ISA), Inferred from Sequence Orthology (ISO), and Inferred from Sequence Model (ISM). Full documentation on these evidence codes is available at the GOC website.SGD has started using these new subcodes to annotate S. cerevisiae gene products as of April 16th, and these evidence codes are included on the Locus Summary pages, the GO Annotation details and references pages, the downloadable gene_association.sgd file and the GO Term Finder tool.

New Summary Paragraphs - April 29, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Added During the Past Week
ATG1/YGL180W ATG10/YLL042C ATG11/YPR049C ATG12/YBR217W ATG13/YPR185W
ATG14/YBR128C ATG15/YCR068W ATG16/YMR159C ATG17/YLR423C ATG18/YFR021W
ATG19/YOL082W ATG2/YNL242W ATG20/YDL113C ATG21/YPL100W ATG22/YCL038C
ATG23/YLR431C ATG26/YLR189C ATG27/YJL178C ATG29/YPL166W ATG3/YNR007C
ATG4/YNL223W ATG5/YPL149W ATG7/YHR171W ATG8/YBL078C ATG9/YDL149W
CIS1/YDR022C SNX4/YJL036W VPS30/YPL120W

GO Annotation Information - April 29, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
CWH43/YCR017C IST1/YNL265C MBA1/YBR185C MRS6/YOR370C NTH2/YBR001C
OXA1/YER154W ROM1/YGR070W ROM2/YLR371W SLC1/YDL052C TRM3/YDL112W
TRM44/YPL030W TRM9/YML014W

GO Annotation Information - April 22, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
AAC3/YBR085W AAH1/YNL141W AFI1/YOR129C ARF3/YOR094W BIO7/YHR214W-G
BIO8/YHR214W-F CDC28/YBR160W DHH1/YDL160C ERP3/YDL018C ERP4/YOR016C
ERP5/YHR110W ERP6/YGL002W GSF2/YML048W GTR1/YML121W GTR2/YGR163W
HUB1/YNR032C-A INO80/YGL150C IRS4/YKR019C IVY1/YDR229W KHS1
MAL62 NAT5/YOR253W NUS1/YDL193W PGA1/YNL158W PGA2/YNL149C
PGA3/YML125C PHO86/YJL117W PHS1/YJL097W PMR1/YGL167C SEC39/YLR440C
SNR13/snR13 SNR35/snR35 SNR39B/snR39B SNR40/snR40 SNR41/snR41
SNR47/snR47 SNR48/snR48 SNR50/snR50 SNR51/snR51 SNR52/snR52
SNR53/snR53 SNR54/snR54 SNR55/snR55 SNR56/snR56 SNR57/snR57
SNR58/snR58 SNR59/snR59 SNR6/snR6 SNR60/snR60 SNR61/snR61
SNR62/snR62 SNR63/snR63 SNR64/snR64 SNR65/snR65 SNR66/snR66
SNR67/snR67 SNR68/snR68 SNR69/snR69 SNR70/snR70 SNR71/snR71
SNR72/snR72 SNR73/snR73 SNR74/snR74 SNR75/snR75 SNR76/snR76
SNR77/snR77 SNR78/snR78 SNR79/snR79 SNR80/snR80 SNR81/snR81
SNR82/snR82 SNR83/snR83 SNR84/snR84 SNR85/snR85 SYT1/YPR095C
TAH1/YCR060W TAX4/YJL083W TRM44/YPL030W XDJ1/YLR090W YEL1/YBL060W

New Wiki Tab - April 18, 2008

  • In order to increase accessibility to SGD's Community Wiki, a new Wiki tab has been added to the set of navigation tabs found at the top of the following pages: Locus Summary, Locus History, Literature Guide, Gene Ontology evidence and references, Phenotype details and references, Interaction details and references, Expression Summary, and Protein Info. These Wiki tabs point to the locus-specific pages in the SGD Wiki. We invite researchers to edit the wiki pages for their favorite gene(s).

GO Annotation Information - April 15, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ARC15/YIL062C ARP2/YDL029W CDC31/YOR257W CSR1/YLR380W DIP2/YLR129W
EDC3/YEL015W EMG1/YLR186W FAS1/YKL182W FLD1/YLR404W FRA1/YLL029W
FRA2/YGL220W GRX6/YDL010W >GRX7/YBR014C GTR1/YML121W GTS1/YGL181W
HCS1/YKL017C LSM4/YER112W MPS3/YJL019W PET54/YGR222W PKP1/YIL042C
PKP2/YGL059W PRP18/YGR006W PRP8/YHR165C PWP2/YCR057C RPB4/YJL140W
RTM1 SNR7-L/snR7-L SNR7-S/snR7-S UTP13/YLR222C UTP18/YJL069C
UTP21/YLR409C UTP6/YDR449C VPS4/YPR173C

New Summary Paragraphs - April 8, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: LPD1/YFL018C.

GO Annotation Information - April 8, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ATP25/YMR098C BFR2/YDR299W BMS1/YPL217C BUD21/YOR078W CBF5/YLR175W
CIN2/YPL241C DBP8/YHR169W DIM1/YPL266W DIP2/YLR129W ECM16/YMR128W
EMG1/YLR186W ENP1/YBR247C ENP2/YGR145W ENS2 FRA1/YLL029W
FRA2/YGL220W GIC2/YDR309C GRX3/YDR098C HAS1/YMR290C IMP3/YHR148W
IMP4/YNL075W KRE33/YNL132W KRR1/YCL059C LSR1 MAL11/YGR289C
MAL41 MAL61 MPP10/YJR002W MPR1 MRD1/YPR112C
NAN1/YPL126W NHP6A/YPR052C NHP6B/YBR089C-A NOC4/YPR144C NOP1/YDL014W
NOP14/YDL148C NOP58/YOR310C NRK1/YNL129W PNO1/YOR145C PNP1/YLR209C
POB3/YML069W PRP43/YGL120C PRS1/YKL181W RCL1/YOL010W RDN37-1
RDN37-2 RNR1/YER070W RNR2/YJL026W RNR3/YIL066C RNR4/YGR180C
ROK1/YGL171W RRP12/YPL012W RRP5/YMR229C RRP9/YPR137W SCL1/YGL011C
SIK1/YLR197W SMI1/YGR229C SNR19/snR19 SNR7-L/snR7-L SNR7-S/snR7-S
SOF1/YLL011W SPP382/YLR424W SPT16/YGL207W SSC1/YJR045C TFB5/YDR079C-A
TSA1/YML028W TSA2/YDR453C TSR1/YDL060W UBP8/YMR223W UTP10/YJL109C
UTP13/YLR222C UTP15/YMR093W UTP18/YJL069C UTP20/YBL004W UTP21/YLR409C
UTP22/YGR090W UTP30/YKR060W UTP4/YDR324C UTP6/YDR449C UTP7/YER082C
UTP8/YGR128C UTP9/YHR196W YLR003C

Post job opportunities through SGD - April 2, 2008

  • Periodically SGD is asked to advertise job opportunities. In response, we have created a page in the Community Wiki to allow researchers to post positions available in their labs. This page is linked from the Career Resources page listed in the navigation menu. These pages can be edited by clicking the "edit" tab at the top of the page.

GO Annotation Information - April 1, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ARO10/YDR380W BNA1/YJR025C BNA2/YJR078W BNA4/YBL098W BNA5/YLR231C
BNA6/YFR047C BNI1/YNL271C BSC2/YDR275W DDI2/YFL061W FLD1/YLR404W
FMP48/YGR052W FMP52/YER004W HSP31/YDR533C LPD1/YFL018C LRC4/YMR098C
MYO4/YAL029C NAT2/YGR147C NRK1/YNL129W PDH1/YPR002W PHM8/YER037W
PHO12/YHR215W RNR4/YGR180C ROG3/YFR022W RPB7/YDR404C SHE2/YKL130C
SHE3/YBR130C SHE4/YOR035C SIT4/YDL047W STP4/YDL048C TMN3/YER113C
UBC12/YLR306W UBC9/YDL064W VPS4/YPR173C YRO2/YBR054W YBL112C
YCL049C YDR222W YEL075C YER130C YER158C
YFL065C YFL066C YFL067W YFL068W YFR026C
YGL242C YGR146C YHL044W YJL016W YKR075C
YLR297W YML002W YML119W YMR144W YNR068C
YPR157W

New Summary Paragraphs - March 25, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: CYC1/YJR048W and CYC7/YEL039C.

GO Annotation Information - March 25, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ATG22/YCL038C BUD23/YCR047C CBR1/YIL043C CCR4/YAL021C CRN1/YLR429W
CYB2/YML054C CYC1/YJR048W CYC7/YEL039C DID2/YKR035W-A DUN1/YDL101C
EEB1/YPL095C EHT1/YBR177C FBP1/YLR377C INN1/YNL152W KRR1/YCL059C
LPD1/YFL018C MOT3/YMR070W NAT2/YGR147C PKP1/YIL042C PKP2/YGL059W
PTC5/YOR090C PTC6/YCR079W PTC7/YHR076W RAD54/YGL163C RDH54/YBR073W
RFX1/YLR176C ROX1/YPR065W RPS14A/YCR031C RPS14B/YJL191W RPS2/YGL123W
RPS6A/YPL090C RPS6B/YBR181C RPS7A/YOR096W RPS7B/YNL096C RPS9A/YPL081W
RPS9B/YBR189W SNR35/snR35 UTP21/YLR409C UTP22/YGR090W VPS4/YPR173C
WTM1/YOR230W WTM2/YOR229W YMR210W

New Summary Paragraphs - March 18, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Added During the Past Week
ADH1/YOL086C ADH2/YMR303C ADH3/YMR083W ADH4/YGL256W ADH5/YBR145W
ALG7/YBR243C SFA1/YDL168W

GO Annotation Information - March 18, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ADH1/YOL086C ADH2/YMR303C ADH3/YMR083W ADH4/YGL256W ADH5/YBR145W
ARO10/YDR380W BNA1/YJR025C BNA2/YJR078W BNA6/YFR047C EAF3/YPR023C
IRC11/YOR013W IRC14/YOR135C IRC15/YPL017C IRC16/YPR038W IRC19/YLL033W
IRC4/YDR540C IRC5/YFR038W IRC7/YFR055W IRC8/YJL051W IRC9/YJL142C
PDC1/YLR044C PDC5/YLR134W PDC6/YGR087C RAD54/YGL163C RDH54/YBR073W
RNR4/YGR180C SFA1/YDL168W SKY1/YMR216C SPT6/YGR116W THI3/YDL080C
TPO1/YLL028W TRS120/YDR407C TRS130/YMR218C

New Summary Paragraphs - March 11, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Added During the Past Week
BNA1/YJR025C BNA2/YJR078W BNA4/YBL098W BNA5/YLR231C BNA6/YFR047C
BNA7/YDR428C CRN1/YLR429W NMA1/YLR328W NMA2/YGR010W NPT1/YOR209C
NRK1/YNL129W PNC1/YGL037C PNP1/YLR209C QNS1/YHR074W SIR2/YDL042C
URH1/YDR400W

GO Annotation Information - March 11, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ADH1/YOL086C BNA3/YJL060W DMA1/YHR115C DMA2/YNL116W DPB2/YPR175W
DPB3/YBR278W DPB4/YDR121W GRE2/YOL151W IRC25/YLR021W IST2/YBR086C
LPD1/YFL018C MIP1/YOR330C MST27/YGL051W MST28/YAR033W NAR1/YNL240C
NRK1/YNL129W POC4/YPL144W POL1/YNL102W POL12/YBL035C POL2/YNL262W
POL3/YDL102W POL31/YJR006W POL32/YJR043C POL4/YCR014C PRM8/YGL053W
PRM9/YAR031W RAD28/YDR030C RAD30/YDR419W REV3/YPL167C REV7/YIL139C
RPB7/YDR404C SLK19/YOR195W SLX5/YDL013W SOD1/YJR104C SOD2/YHR008C
TPO1/YLL028W ULS1/YOR191W YAR029W YGR031W YHL044W
YMR210W

GO annotations with IEAs now in SGD's gene_association file - March 10, 2008

  • SGD has changed the contents of our file that contains GO annotations. This is a major change as it now includes annotations that are associated with computationally predicted methods. These annotations include computationally predicted annotations to the Gene Ontology created by the Gene Ontology Annotation (GOA) project at EBI, Hinxton UK. The file available from the GO Consortium is called gene_association.sgd

Sequence and Annotation Updates - March 7, 2008

  • SGD curators periodically update the systematic sequence and its annotation. Information regarding changes can be found via the Summary of Chromosome Sequence and Annotation Updates and in the "Locus History" pages of affected features. Files on the SGD FTP site are updated weekly. Between 2008-3-3 and 2008-3-7, the sequence of Chromosome I was updated, affecting GCV3/YAL044C; and the annotation of the LTR YCRCtau1 on Chromosome III was updated.

New Summary Paragraphs - March 4, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features: HNM1/YGL077C, PHO85/YPL031C, PMR1/YGL167C, and STE14/YDR410C.

GO Annotation Information - March 4, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ADH1/YOL086C CRN1/YLR429W DLD3/YEL071W GRE2/YOL151W GUP1/YGL084C
IRC15/YPL017C LAS17/YOR181W LGE1/YPL055C LIA1/YJR070C MMS22/YLR320W
MYO3/YKL129C MYO5/YMR109W NBA1/YOL070C PAN1/YIR006C PCL1/YNL289W
PCL10/YGL134W PCL2/YDL127W PCL5/YHR071W PCL7/YIL050W PCL8/YPL219W
PCL9/YDL179W PHO80/YOL001W PHO85/YPL031C RMD11/YHL023C RMR1/YGL250W
RPC25/YKL144C SEC27/YGL137W SEC28/YIL076W SOH1/YGL127C STE14/YDR410C

Potential downtime at SGD - February 28, 2008

  • SGD may be temporarily unavailable without notice due to an air conditioning problem in our machine room. We will try to keep SGD online. However, it is likely that some SGD pages may be unavailable until this is repaired. You can also view basic yeast data at the SGD Lite database. We apologize in advance for any inconvenience this may cause.

GO Annotation Information - February 26, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ACF2/YLR144C ADH4/YGL256W ECM7/YLR443W ENT3/YJR125C ENT5/YDR153C
HNM1/YGL077C ICP55/YER078C KEG1/YFR042W KRE6/YPR159W MPT5/YGL178W
NUD1/YOR373W OLA1/YBR025C RAD54/YGL163C RDH54/YBR073W SCS2/YER120W
SIM1/YIL123W STE14/YDR410C TPO1/YLL028W TPO2/YGR138C TPO3/YPR156C
TPO4/YOR273C YCR023C YGR031W

New Summary Paragraphs - February 19, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Added During the Past Week
SOL1/YNR034W SOL2/YCR073W-A SOL3/YHR163W SOL4/YGR248W UGA4/YDL210W

GO Annotation Information - February 19, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
ATE1/YGL017W BNA3/YJL060W BNA6/YFR047C DBP1/YPL119C GCV2/YMR189W
HIR1/YBL008W HIR2/YOR038C HIR3/YJR140C HPC2/YBR215W HXK1/YFR053C
ICT1/YLR099C MTD1/YKR080W MTF1/YMR228W NAM7/YMR080C NFS1/YCL017C
NIF3/YGL221C NRT1/YOR071C PDS1/YDR113C RAD3/YER171W RAD54/YGL163C
RDH54/YBR073W RFX1/YLR176C RPO41/YFL036W SIM1/YIL123W SLY1/YDR189W
SSL2/YIL143C THI7/YLR237W THI72/YOR192C UGA4/YDL210W

Coming Soon: GO annotations with IEAs to be added to SGD's gene_association file on March 8th - February 14, 2008

  • On March 8, 2008, SGD will change the contents of our files that contains GO annotations. This is a major change as we will add annotations that are associated with computationally predicted methods. The SGD file currently does not include annotations that are made using the IEA evidence code. These annotations include computationally predicted annotations to the Gene Ontology created by the Gene Ontology Annotation (GOA) project at EBI, Hinxton UK. The file available from the GO Consortium is called gene_association.sgd.

New Summary Paragraphs - February 12, 2008

  • Summary Paragraphs summarize published biological information for a gene/feature, and are designed to familiarize both yeast and non-yeast researchers with the general facts and important subtleties regarding a locus. During the past week, new summary paragraphs have been added to their respective Locus Summary pages for the following features:
List of Summary Paragraphs Added During the Past Week
AQR1/YNL065W ATG1/YGL180W ATG12/YBR217W ATG18/YFR021W ATG21/YPL100W
ATG3/YNR007C ATG5/YPL149W ATG7/YHR171W ATG8/YBL078C DTR1/YBR180W
FLR1/YBR008C HOL1/YNR055C HRD1/YOL013C QDR1/YIL120W QDR2/YIL121W
QDR3/YBR043C SSM4/YIL030C TPO1/YLL028W TPO2/YGR138C TPO3/YPR156C
TPO4/YOR273C VPS30/YPL120W YHK8/YHR048W

GO Annotation Information - February 12, 2008

  • During the past week, the GO annotations have been updated for the following features:
List of Features with GO Annotations Updated During the Past Week
AGP3/YFL055W ALR2/YFL050C ARG82/YDR173C ASC1/YMR116C ASF1/YJL115W
ASN1/YPR145W ASN2/YGR124W BEM4/YPL161C BNA3/YJL060W BNA7/YDR428C
BRE1/YDL074C BUD27/YFL023W CDC48/YDL126C CDC73/YLR418C CKB2/YOR039W
CLN2/YPL256C CSE2/YNR010W CUE1/YMR264W CWC24/YLR323C DER1/YBR201W
EAF3/YPR023C ELF1/YKL160W ELG1/YOR144C HHT1/YBR010W HNM1/YGL077C
HRD1/YOL013C HRD3/YLR207W IPK1/YDR315C KAR2/YJL034W KCS1/YDR017C
LEO1/YOR123C MMS1/YPR164W MMS22/YLR320W NPL4/YBR170C PAF1/YBR279W
PBS2/YJL128C RPD3/YNL330C RTF1/YGL244W RTT10/YPL183C RTT101/YJL047C
RTT103/YDR289C RTT105/YER104W RTT106/YNL206C RTT107/YHR154W RTT109/YLL002W
SCS7/YMR272C SIC1/YLR079W SIN3/YOL004W SNR128/snR128 SNR13/snR13
SNR18/snR18 SNR24/snR24 SNR35/snR35 SNR38/snR38 SNR39/snR39
SNR39B/snR39B SNR40/snR40 SNR41/snR41 SNR47/snR47 SNR48/snR48
SNR50/snR50 SNR51/snR51 SNR52/snR52 SNR53/snR53 SNR54/snR54
SNR55/snR55 SNR56/snR56 SNR57/snR57 SNR58/snR58 SNR59/snR59
SNR60/snR60 SNR61/snR61 SNR62/snR62 SNR63/snR63 SNR64/snR64
SNR65/snR65 SNR66/snR66 SNR67/snR67 SNR68/snR68 SNR69/snR69
SNR70/snR70 SNR71/snR71 SNR72/snR72 SNR73/snR73 SNR74/snR74
SNR75/snR75 SNR76/snR76 SNR77/snR77 SNR78/snR78 SNR79/snR79
SNR80/snR80 SNR81/snR81 SNR82/snR82 SNR83/snR83 SNR84/snR84
SNR85/snR85 SNR87/snR87 SNR9/snR9 SOH1/YGL127C SPT21/YMR179W
SPT5/YML010W SRB5/YGR104C SSK2/YNR031C SSK22/YCR073C SSM4/YIL030C
THI71/YOR071C UBX2/YML013W UFD1/YGR048W USA1/YML029W YFH7/YFR007W
YOS9/YDR057W

SGD RSS Feed - February 12, 2008

  • Updates and announcements from SGD are now available via our RSS feed. To read it, you will need to subscribe to our RSS feed using an RSS news reader. Applications that can read our RSS feed include FeedDemon, Firefox, Safari, Mac Mail version 3.1, and Google Reader.

SGD Quarterly Newsletter - January 31, 2008

  • SGD sends out its quarterly newsletter to colleagues designated as contacts in SGD. An HTML version of the newsletter is available. If you would like to receive this letter in the future please use the Colleague Submission/Update form to let us know.

Update on Yeast Biochemical Pathways - January 29, 2008

  • All 133 pathways available from the Yeast Biochemical

Pathways have been manually reviewed and referenced. In addition, pathways that have not been documented to occur in yeast have been removed. Curation of pathways unique to S. cerevisiae is ongoing, and we welcome feedback from the research community. The yeast biochemical pathways data are available from SGD's FTP site in two files: the biochemical_pathways.tab file and yeastcyc11.0.tar.200801.gz. These files are updated monthly. In addition, for easy download and accessibility, the yeastcyc11.0 data files are also available for download through the Pathways PGDB Registry for use with the Pathway Tools software.

NAR Database Article - January 8, 2008

  • The 2008 Nucleic Acids Research Database issue is now available. This issue includes a paper HTML and PDF by the SGD staff describing the annotation methods used to assign GO annotations at SGD.
Personal tools
Namespaces

Variants
Actions
SGD Wiki
Laboratory
Resources
Explore More
Reference Library
SGD Archives
Toolbox