Difference between revisions of "YNL299W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005243 YNL299W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''TRF5 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''TRF5 '' | ||
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|nowrap| Chr XIV:66517..68445 | |nowrap| Chr XIV:66517..68445 | ||
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005243 |
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| − | '''Description of | + | '''Description of YNL299W:''' Non-canonical poly(A) polymerase, involved in nuclear RNA degradation as a component of the TRAMP complex; catalyzes polyadenylation of hypomodified tRNAs, and snoRNA and rRNA precursors; overlapping but non-redundant functions with Pap2p<ref name='S000114117'>Egecioglu DE, et al. (2006) Contributions of Trf4p- and Trf5p-dependent polyadenylation to the processing and degradative functions of the yeast nuclear exosome. RNA 12(1):26-32 {{SGDpaper|S000114117}} PMID 16373491</ref><ref name='S000087060'>Haracska L, et al. (2005) Trf4 and Trf5 proteins of Saccharomyces cerevisiae exhibit poly(A) RNA polymerase activity but no DNA polymerase activity. Mol Cell Biol 25(22):10183-9 {{SGDpaper|S000087060}} PMID 16260630</ref><ref name='S000114120'>Houseley J and Tollervey D (2006) Yeast Trf5p is a nuclear poly(A) polymerase. EMBO Rep 7(2):205-11 {{SGDpaper|S000114120}} PMID 16374505</ref><ref name='S000081843'>LaCava J, et al. (2005) RNA degradation by the exosome is promoted by a nuclear polyadenylation complex. Cell 121(5):713-24 {{SGDpaper|S000081843}} PMID 15935758</ref><ref name='S000081438'>Vanacova S, et al. (2005) A new yeast poly(A) polymerase complex involved in RNA quality control. PLoS Biol 3(6):e189 |
| − | + | {{SGDpaper|S000081438}} PMID 15828860</ref> | |
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==Community Commentary== | ==Community Commentary== | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YNL299W |
| Gene name | TRF5 |
| Aliases | |
| Feature type | ORF, Verified |
| Coordinates | Chr XIV:66517..68445 |
| Primary SGDID | S000005243 |
Description of YNL299W: Non-canonical poly(A) polymerase, involved in nuclear RNA degradation as a component of the TRAMP complex; catalyzes polyadenylation of hypomodified tRNAs, and snoRNA and rRNA precursors; overlapping but non-redundant functions with Pap2p[1][2][3][4][5]
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Contents
Community Commentary
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References
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- ↑ Egecioglu DE, et al. (2006) Contributions of Trf4p- and Trf5p-dependent polyadenylation to the processing and degradative functions of the yeast nuclear exosome. RNA 12(1):26-32 SGD PMID 16373491
- ↑ Haracska L, et al. (2005) Trf4 and Trf5 proteins of Saccharomyces cerevisiae exhibit poly(A) RNA polymerase activity but no DNA polymerase activity. Mol Cell Biol 25(22):10183-9 SGD PMID 16260630
- ↑ Houseley J and Tollervey D (2006) Yeast Trf5p is a nuclear poly(A) polymerase. EMBO Rep 7(2):205-11 SGD PMID 16374505
- ↑ LaCava J, et al. (2005) RNA degradation by the exosome is promoted by a nuclear polyadenylation complex. Cell 121(5):713-24 SGD PMID 15935758
- ↑ Vanacova S, et al. (2005) A new yeast poly(A) polymerase complex involved in RNA quality control. PLoS Biol 3(6):e189 SGD PMID 15828860
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