Difference between revisions of "YML046W"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YML046W YML046W]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000004509 YML046W]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''PRP39 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''PRP39 ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|nowrap| Chr XIII:181474..183363
 
|nowrap| Chr XIII:181474..183363
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000004509
 
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'''Description of {{PAGENAME}}:''' U1 snRNP protein involved in splicing, contains multiple tetriatricopeptide repeats<ref name='S000064189'>Zhang D and Rosbash M (1999) Identification of eight proteins that cross-link to pre-mRNA in the yeast commitment complex. Genes Dev 13(5):581-92 {{SGDpaper|S000064189}} PMID 10072386</ref><ref name='S000044485'>Gottschalk A, et al. (1998) A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins. RNA 4(4):374-93
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'''Description of YML046W:''' U1 snRNP protein involved in splicing, contains multiple tetriatricopeptide repeats<ref name='S000044485'>Gottschalk A, et al. (1998) A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins. RNA 4(4):374-93 {{SGDpaper|S000044485}} PMID 9630245</ref><ref name='S000040958'>Lockhart SR and Rymond BC (1994) Commitment of yeast pre-mRNA to the splicing pathway requires a novel U1 small nuclear ribonucleoprotein polypeptide, Prp39p. Mol Cell Biol 14(6):3623-33 {{SGDpaper|S000040958}} PMID 8196608</ref><ref name='S000064189'>Zhang D and Rosbash M (1999) Identification of eight proteins that cross-link to pre-mRNA in the yeast commitment complex. Genes Dev 13(5):581-92
  {{SGDpaper|S000044485}} PMID 9630245</ref>
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  {{SGDpaper|S000064189}} PMID 10072386</ref>
 
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J Biol Chem 278(5):3265-74</ref>
 
J Biol Chem 278(5):3265-74</ref>
 
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Latest revision as of 07:45, 23 January 2012

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Systematic name YML046W
Gene name PRP39
Aliases
Feature type ORF, Verified
Coordinates Chr XIII:181474..183363
Primary SGDID S000004509


Description of YML046W: U1 snRNP protein involved in splicing, contains multiple tetriatricopeptide repeats[1][2][3]




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Community Commentary

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Interactions

Two Hybrid

Two Hybrid interaction with Prp8
N-terminal region of Prp8 interacts with Prp39 [4] [5]





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References

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  1. Gottschalk A, et al. (1998) A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins. RNA 4(4):374-93 SGD PMID 9630245
  2. Lockhart SR and Rymond BC (1994) Commitment of yeast pre-mRNA to the splicing pathway requires a novel U1 small nuclear ribonucleoprotein polypeptide, Prp39p. Mol Cell Biol 14(6):3623-33 SGD PMID 8196608
  3. Zhang D and Rosbash M (1999) Identification of eight proteins that cross-link to pre-mRNA in the yeast commitment complex. Genes Dev 13(5):581-92 SGD PMID 10072386
  4. van Nues RW and Beggs JD (2001) Functional contacts with a range of splicing proteins suggest a central role for Brr2p in the dynamic control of the order of events in spliceosomes of Saccharomyces cerevisiae. Genetics 157(4):1451-67 SGD PMID 11290703
  5. submitted by Richard Grainger on 2003-04-11

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