Difference between revisions of "YKL012W"

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{|{{Prettytable}} align = 'right' width = '200px'
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YKL012W YKL012W]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001495 YKL012W]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''PRP40 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''PRP40 ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr XI:417953..419704
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|nowrap| Chr XI:418310..420061
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000001495
 
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'''Description of {{PAGENAME}}:''' U1 snRNP protein involved in splicing, interacts with the branchpoint-binding protein during the formation of the second commitment complex<ref name='S000040368'>Abovich N and Rosbash M (1997) Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals. Cell 89(3):403-12
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'''Description of YKL012W:''' U1 snRNP protein involved in splicing, interacts with the branchpoint-binding protein during the formation of the second commitment complex<ref name='S000040368'>Abovich N and Rosbash M (1997) Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals. Cell 89(3):403-12
 
  {{SGDpaper|S000040368}} PMID 9150140</ref>
 
  {{SGDpaper|S000040368}} PMID 9150140</ref>
 
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=== Interactions ===
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[[Category:Topic:Interactions]]
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==== Two Hybrid ====
 
[[Category:Topic:Interactions:Two Hybrid]]
 
Two Hybrid interaction with Prp8 [[Category:Two Hybrid Interactions with Prp8]]<br>
 
Prp8 interacts with the U1snRNP protein Prp40 <ref name='S000040368'>Abovich N and Rosbash M (1997) Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals. Cell 89(3):403-12 {{SGDpaper|S000040368}} PMID 9150140</ref> <ref name = 'CAset9267-2003-04-11'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9267 Richard Grainger] on 2003-04-11</ref>
 
 
 
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==Community Commentary==
 
==Community Commentary==
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Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
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<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
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J Biol Chem 278(5):3265-74</ref>
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==References==
 
==References==
 
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Latest revision as of 07:45, 23 January 2012

Share your knowledge...Edit this entry! <protect>

Systematic name YKL012W
Gene name PRP40
Aliases
Feature type ORF, Verified
Coordinates Chr XI:418310..420061
Primary SGDID S000001495


Description of YKL012W: U1 snRNP protein involved in splicing, interacts with the branchpoint-binding protein during the formation of the second commitment complex[1]




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Community Commentary

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Interactions

Two Hybrid

Two Hybrid interaction with Prp8
Prp8 interacts with the U1snRNP protein Prp40 [1] [2]





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References

See Help:References on how to add references

  1. 1.0 1.1 Abovich N and Rosbash M (1997) Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals. Cell 89(3):403-12 SGD PMID 9150140 Cite error: Invalid <ref> tag; name "S000040368" defined multiple times with different content
  2. submitted by Richard Grainger on 2003-04-11

See Help:Categories on how to add the wiki page for this gene to a Category </protect>