Difference between revisions of "YMR019W"

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'''Description of YMR019W:''' Protein that binds Sin3p in a two-hybrid assay; contains a Zn(II)2Cys6 zinc finger domain characteristic of DNA-binding proteins; computational analysis suggests a role in regulation of expression of genes encoding transporters<ref name='S000054148'>Kasten MM and Stillman DJ (1997) Identification of the Saccharomyces cerevisiae genes STB1-STB5 encoding Sin3p binding proteins. Mol Gen Genet 256(4):376-86 {{SGDpaper|S000054148}} PMID 9393435</ref><ref name='S000126853'>Ward LD and Bussemaker HJ (2008) Predicting functional transcription factor binding through alignment-free and affinity-based analysis of orthologous promoter sequences. Bioinformatics 24(13):i165-71
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'''Description of YMR019W:''' Putative transcription factor; contains a Zn(II)2Cys6 zinc finger domain characteristic of DNA-binding proteins; computational analysis suggests a role in regulation of expression of genes encoding transporters; binds Sin3p in a two-hybrid assay;<ref name='S000054148'>Kasten MM and Stillman DJ (1997) Identification of the Saccharomyces cerevisiae genes STB1-STB5 encoding Sin3p binding proteins. Mol Gen Genet 256(4):376-86 {{SGDpaper|S000054148}} PMID 9393435</ref><ref name='S000126853'>Ward LD and Bussemaker HJ (2008) Predicting functional transcription factor binding through alignment-free and affinity-based analysis of orthologous promoter sequences. Bioinformatics 24(13):i165-71 {{SGDpaper|S000126853}} PMID 18586710</ref><ref name='S000144437'>Yang Y, et al. (2010) Identifying cooperative transcription factors by combining ChIP-chip data and knockout data. Cell Res 20(11):1276-8
  {{SGDpaper|S000126853}} PMID 18586710</ref>
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  {{SGDpaper|S000144437}} PMID 20975739</ref>
 
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Latest revision as of 14:05, 21 February 2012

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Systematic name YMR019W
Gene name STB4
Aliases
Feature type ORF, Verified
Coordinates Chr XIII:312156..315005
Primary SGDID S000004621


Description of YMR019W: Putative transcription factor; contains a Zn(II)2Cys6 zinc finger domain characteristic of DNA-binding proteins; computational analysis suggests a role in regulation of expression of genes encoding transporters; binds Sin3p in a two-hybrid assay;[1][2][3]




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References

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  1. Kasten MM and Stillman DJ (1997) Identification of the Saccharomyces cerevisiae genes STB1-STB5 encoding Sin3p binding proteins. Mol Gen Genet 256(4):376-86 SGD PMID 9393435
  2. Ward LD and Bussemaker HJ (2008) Predicting functional transcription factor binding through alignment-free and affinity-based analysis of orthologous promoter sequences. Bioinformatics 24(13):i165-71 SGD PMID 18586710
  3. Yang Y, et al. (2010) Identifying cooperative transcription factors by combining ChIP-chip data and knockout data. Cell Res 20(11):1276-8 SGD PMID 20975739

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