Difference between revisions of "YKL208W"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YKL208W YKL208W]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001691 YKL208W]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''CBT1 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''CBT1 ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr XI:47158..47973
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|nowrap| Chr XI:47157..47972
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000001691
 
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'''Description of {{PAGENAME}}:''' Protein involved in 5' end processing of mitochondrial COB, 15S_rRNA, and RPM1 transcripts; may also have a role in 3' end processing of the COB pre-mRNA; displays genetic interaction with cell cycle-regulated kinase Dbf2p<ref name='S000086295'>Ellis TP, et al. (2005) CBT1 interacts genetically with CBP1 and the mitochondrially encoded cytochrome b gene and is required to stabilize the mature cytochrome b mRNA of Saccharomyces cerevisiae. Genetics 171(3):949-57 {{SGDpaper|S000086295}} PMID 16118200</ref><ref name='S000058221'>Rieger KJ, et al. (1997) A novel nuclear gene, CBT1, essential for mitochondrial cytochrome b formation: terminal processing of mRNA and intron dependence. Curr Genet 32(3):163-74 {{SGDpaper|S000058221}} PMID 9339340</ref><ref name='S000049547'>Grandin N and Charbonneau M (1999) Dbf2 is implicated in a Cbt1-dependent pathway following a shift from glucose to galactose or non-fermentable carbon sources in Saccharomyces cerevisiae. Mol Gen Genet 261(2):402-7
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'''Description of YKL208W:''' Protein involved in 5' end processing of mitochondrial COB, 15S_rRNA, and RPM1 transcripts; may also have a role in 3' end processing of the COB pre-mRNA; displays genetic interaction with cell cycle-regulated kinase Dbf2p<ref name='S000086295'>Ellis TP, et al. (2005) CBT1 interacts genetically with CBP1 and the mitochondrially encoded cytochrome b gene and is required to stabilize the mature cytochrome b mRNA of Saccharomyces cerevisiae. Genetics 171(3):949-57 {{SGDpaper|S000086295}} PMID 16118200</ref><ref name='S000049547'>Grandin N and Charbonneau M (1999) Dbf2 is implicated in a Cbt1-dependent pathway following a shift from glucose to galactose or non-fermentable carbon sources in Saccharomyces cerevisiae. Mol Gen Genet 261(2):402-7 {{SGDpaper|S000049547}} PMID 10102376</ref><ref name='S000058221'>Rieger KJ, et al. (1997) A novel nuclear gene, CBT1, essential for mitochondrial cytochrome b formation: terminal processing of mRNA and intron dependence. Curr Genet 32(3):163-74
  {{SGDpaper|S000049547}} PMID 10102376</ref>
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  {{SGDpaper|S000058221}} PMID 9339340</ref>
 
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==Community Commentary==
 
==Community Commentary==
 
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Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
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<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
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J Biol Chem 278(5):3265-74</ref>
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==References==
 
==References==
 
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Latest revision as of 07:45, 23 January 2012

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Systematic name YKL208W
Gene name CBT1
Aliases SOC1
Feature type ORF, Verified
Coordinates Chr XI:47157..47972
Primary SGDID S000001691


Description of YKL208W: Protein involved in 5' end processing of mitochondrial COB, 15S_rRNA, and RPM1 transcripts; may also have a role in 3' end processing of the COB pre-mRNA; displays genetic interaction with cell cycle-regulated kinase Dbf2p[1][2][3]




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Community Commentary

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References

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  1. Ellis TP, et al. (2005) CBT1 interacts genetically with CBP1 and the mitochondrially encoded cytochrome b gene and is required to stabilize the mature cytochrome b mRNA of Saccharomyces cerevisiae. Genetics 171(3):949-57 SGD PMID 16118200
  2. Grandin N and Charbonneau M (1999) Dbf2 is implicated in a Cbt1-dependent pathway following a shift from glucose to galactose or non-fermentable carbon sources in Saccharomyces cerevisiae. Mol Gen Genet 261(2):402-7 SGD PMID 10102376
  3. Rieger KJ, et al. (1997) A novel nuclear gene, CBT1, essential for mitochondrial cytochrome b formation: terminal processing of mRNA and intron dependence. Curr Genet 32(3):163-74 SGD PMID 9339340

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