Difference between revisions of "YKL173W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001656 YKL173W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SNU114 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SNU114 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XI: | + | |nowrap| Chr XI:122517..125543 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000001656 |
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| − | '''Description of | + | '''Description of YKL173W:''' GTPase component of U5 snRNP involved in mRNA splicing via spliceosome; binds directly to U5 snRNA; proposed to be involved in conformational changes of the spliceosome; similarity to ribosomal translocation factor EF-2<ref name='S000081766'>Brenner TJ and Guthrie C (2005) Genetic analysis reveals a role for the C terminus of the Saccharomyces cerevisiae GTPase Snu114 during spliceosome activation. Genetics 170(3):1063-80 {{SGDpaper|S000081766}} PMID 15911574</ref><ref name='S000039943'>Dix I, et al. (1998) Protein-RNA interactions in the U5 snRNP of Saccharomyces cerevisiae. RNA 4(12):1675-86 {{SGDpaper|S000039943}} PMID 9848662</ref><ref name='S000048254'>Fabrizio P, et al. (1997) An evolutionarily conserved U5 snRNP-specific protein is a GTP-binding factor closely related to the ribosomal translocase EF-2. EMBO J 16(13):4092-106 {{SGDpaper|S000048254}} PMID 9233818</ref><ref name='S000056376'>Stevens SW and Abelson J (1999) Purification of the yeast U4/U6.U5 small nuclear ribonucleoprotein particle and identification of its proteins. Proc Natl Acad Sci U S A 96(13):7226-31 |
| − | {{SGDpaper| | + | {{SGDpaper|S000056376}} PMID 10377396</ref> |
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==Community Commentary== | ==Community Commentary== | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YKL173W |
| Gene name | SNU114 |
| Aliases | GIN10 |
| Feature type | ORF, Verified |
| Coordinates | Chr XI:122517..125543 |
| Primary SGDID | S000001656 |
Description of YKL173W: GTPase component of U5 snRNP involved in mRNA splicing via spliceosome; binds directly to U5 snRNA; proposed to be involved in conformational changes of the spliceosome; similarity to ribosomal translocation factor EF-2[1][2][3][4]
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Contents
Community Commentary
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References
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- ↑ Brenner TJ and Guthrie C (2005) Genetic analysis reveals a role for the C terminus of the Saccharomyces cerevisiae GTPase Snu114 during spliceosome activation. Genetics 170(3):1063-80 SGD PMID 15911574
- ↑ Dix I, et al. (1998) Protein-RNA interactions in the U5 snRNP of Saccharomyces cerevisiae. RNA 4(12):1675-86 SGD PMID 9848662
- ↑ Fabrizio P, et al. (1997) An evolutionarily conserved U5 snRNP-specific protein is a GTP-binding factor closely related to the ribosomal translocase EF-2. EMBO J 16(13):4092-106 SGD PMID 9233818
- ↑ Stevens SW and Abelson J (1999) Purification of the yeast U4/U6.U5 small nuclear ribonucleoprotein particle and identification of its proteins. Proc Natl Acad Sci U S A 96(13):7226-31 SGD PMID 10377396
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