Difference between revisions of "YPL085W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000006006 YPL085W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SEC16 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SEC16 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XVI: | + | |nowrap| Chr XVI:387067..393654 |
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| + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000006006 | ||
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| − | '''Description of | + | '''Description of YPL085W:''' COPII vesicle coat protein required for ER transport vesicle budding; Sec16p is bound to the periphery of ER membranes and may act to stabilize initial COPII complexes; interacts with Sec23p, Sec24p and Sec31p<ref name='S000075054'>Gimeno RE, et al. (1996) COPII coat subunit interactions: Sec24p and Sec23p bind to adjacent regions of Sec16p. Mol Biol Cell 7(11):1815-23 {{SGDpaper|S000075054}} PMID 8930902</ref><ref name='S000075391'>Huijbregts RP, et al. (2000) Lipid metabolism and regulation of membrane trafficking. Traffic 1(3):195-202 {{SGDpaper|S000075391}} PMID 11208102</ref><ref name='S000066273'>Ishihara N, et al. (2001) Autophagosome requires specific early Sec proteins for its formation and NSF/SNARE for vacuolar fusion. Mol Biol Cell 12(11):3690-702 {{SGDpaper|S000066273}} PMID 11694599</ref><ref name='S000050429'>Shaywitz DA, et al. (1997) COPII subunit interactions in the assembly of the vesicle coat. J Biol Chem 272(41):25413-6 {{SGDpaper|S000050429}} PMID 9325247</ref><ref name='S000071166'>Supek F, et al. (2002) Sec16p potentiates the action of COPII proteins to bud transport vesicles. J Cell Biol 158(6):1029-38 {{SGDpaper|S000071166}} PMID 12235121</ref><ref name='S000043706'>Swigart P, et al. (2000) Purification and cloning of phosphatidylinositol transfer proteins from Dictyostelium discoideum: homologues of both mammalian PITPs and Saccharomyces cerevisiae sec14p are found in the same cell. Biochem J 347 Pt 3():837-43 |
{{SGDpaper|S000043706}} PMID 10769190</ref> | {{SGDpaper|S000043706}} PMID 10769190</ref> | ||
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==Community Commentary== | ==Community Commentary== | ||
{{CommentaryHelp}} | {{CommentaryHelp}} | ||
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| + | <!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --> | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YPL085W |
| Gene name | SEC16 |
| Aliases | LPF1 |
| Feature type | ORF, Verified |
| Coordinates | Chr XVI:387067..393654 |
| Primary SGDID | S000006006 |
Description of YPL085W: COPII vesicle coat protein required for ER transport vesicle budding; Sec16p is bound to the periphery of ER membranes and may act to stabilize initial COPII complexes; interacts with Sec23p, Sec24p and Sec31p[1][2][3][4][5][6]
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References
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- ↑ Gimeno RE, et al. (1996) COPII coat subunit interactions: Sec24p and Sec23p bind to adjacent regions of Sec16p. Mol Biol Cell 7(11):1815-23 SGD PMID 8930902
- ↑ Huijbregts RP, et al. (2000) Lipid metabolism and regulation of membrane trafficking. Traffic 1(3):195-202 SGD PMID 11208102
- ↑ Ishihara N, et al. (2001) Autophagosome requires specific early Sec proteins for its formation and NSF/SNARE for vacuolar fusion. Mol Biol Cell 12(11):3690-702 SGD PMID 11694599
- ↑ Shaywitz DA, et al. (1997) COPII subunit interactions in the assembly of the vesicle coat. J Biol Chem 272(41):25413-6 SGD PMID 9325247
- ↑ Supek F, et al. (2002) Sec16p potentiates the action of COPII proteins to bud transport vesicles. J Cell Biol 158(6):1029-38 SGD PMID 12235121
- ↑ Swigart P, et al. (2000) Purification and cloning of phosphatidylinositol transfer proteins from Dictyostelium discoideum: homologues of both mammalian PITPs and Saccharomyces cerevisiae sec14p are found in the same cell. Biochem J 347 Pt 3():837-43 SGD PMID 10769190
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