Difference between revisions of "YNL216W"

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{|{{Prettytable}} align = 'right' width = '200px'
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YNL216W YNL216W]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005160 YNL216W]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''RAP1 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''RAP1 ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr XIV:241690..244173
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|nowrap| Chr XIV:241689..244172
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000005160
 
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'''Description of {{PAGENAME}}:''' DNA-binding protein involved in either activation or repression of transcription, depending on binding site context; also binds telomere sequences and plays a role in telomeric position effect (silencing) and telomere structure<ref name='S000073219'>Pina B, et al. (2003) The different (sur)faces of Rap1p. Mol Genet Genomics 268(6):791-8
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'''Description of YNL216W:''' Essential DNA-binding transcription regulator that binds at many loci; involved in either transcription activation or repression, chromatin silencing, and telomere length maintenance; conserved protein with an N-terminal BRCT domain, a central region with homology to the Myb DNA binding domain, and a C-terminal Rap1-specific protein-interaction domain (RCT domain)<ref name='S000143073'>Chen Y, et al. (2011) A conserved motif within RAP1 has diversified roles in telomere protection and regulation in different organisms. Nat Struct Mol Biol 18(2):213-21 {{SGDpaper|S000143073}} PMID 21217703</ref><ref name='S000066410'>Konig P, et al. (1996) The crystal structure of the DNA-binding domain of yeast RAP1 in complex with telomeric DNA. Cell 85(1):125-36 {{SGDpaper|S000066410}} PMID 8620531</ref><ref name='S000061169'>Lieb JD, et al. (2001) Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association. Nat Genet 28(4):327-34 {{SGDpaper|S000061169}} PMID 11455386</ref><ref name='S000073219'>Pina B, et al. (2003) The different (sur)faces of Rap1p. Mol Genet Genomics 268(6):791-8 {{SGDpaper|S000073219}} PMID 12655405</ref><ref name='S000142168'>Zhang W, et al. (2011) Solution structure of Rap1 BRCT domain from Saccharomyces cerevisiae reveals a novel fold. Biochem Biophys Res Commun 404(4):1055-9
  {{SGDpaper|S000073219}} PMID 12655405</ref>
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  {{SGDpaper|S000142168}} PMID 21187076</ref>
 
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J Biol Chem 278(5):3265-74</ref>
 
J Biol Chem 278(5):3265-74</ref>
 
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Latest revision as of 14:05, 2 May 2012

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Systematic name YNL216W
Gene name RAP1
Aliases GRF1, TBA1, TUF1
Feature type ORF, Verified
Coordinates Chr XIV:241689..244172
Primary SGDID S000005160


Description of YNL216W: Essential DNA-binding transcription regulator that binds at many loci; involved in either transcription activation or repression, chromatin silencing, and telomere length maintenance; conserved protein with an N-terminal BRCT domain, a central region with homology to the Myb DNA binding domain, and a C-terminal Rap1-specific protein-interaction domain (RCT domain)[1][2][3][4][5]




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References

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  1. Chen Y, et al. (2011) A conserved motif within RAP1 has diversified roles in telomere protection and regulation in different organisms. Nat Struct Mol Biol 18(2):213-21 SGD PMID 21217703
  2. Konig P, et al. (1996) The crystal structure of the DNA-binding domain of yeast RAP1 in complex with telomeric DNA. Cell 85(1):125-36 SGD PMID 8620531
  3. Lieb JD, et al. (2001) Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association. Nat Genet 28(4):327-34 SGD PMID 11455386
  4. Pina B, et al. (2003) The different (sur)faces of Rap1p. Mol Genet Genomics 268(6):791-8 SGD PMID 12655405
  5. Zhang W, et al. (2011) Solution structure of Rap1 BRCT domain from Saccharomyces cerevisiae reveals a novel fold. Biochem Biophys Res Commun 404(4):1055-9 SGD PMID 21187076

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