Difference between revisions of "YMR239C"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000004852 YMR239C] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''RNT1 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''RNT1 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XIII: | + | |nowrap| Chr XIII:749677..748262 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000004852 |
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| − | '''Description of | + | '''Description of YMR239C:''' RNAase III; involved in rDNA transcription and rRNA processing; also cleaves a stem-loop structure at the 3' end of U2 snRNA to ensure formation of the correct U2 3' end; involved in polyadenylation-independent transcription termination<ref name='S000046699'>Abou Elela S and Ares M Jr (1998) Depletion of yeast RNase III blocks correct U2 3' end formation and results in polyadenylated but functional U2 snRNA. EMBO J 17(13):3738-46 {{SGDpaper|S000046699}} PMID 9649443</ref><ref name='S000124630'>Catala M, et al. (2008) Deletion of Rnt1p alters the proportion of open versus closed rRNA gene repeats in yeast. Mol Cell Biol 28(2):619-29 {{SGDpaper|S000124630}} PMID 17991894</ref><ref name='S000057838'>Elela SA, et al. (1996) RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site. Cell 85(1):115-24 {{SGDpaper|S000057838}} PMID 8620530</ref><ref name='S000131998'>Ghazal G, et al. (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109 |
| − | {{SGDpaper| | + | {{SGDpaper|S000131998}} PMID 19818713</ref> |
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==Community Commentary== | ==Community Commentary== | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YMR239C |
| Gene name | RNT1 |
| Aliases | |
| Feature type | ORF, Verified |
| Coordinates | Chr XIII:749677..748262 |
| Primary SGDID | S000004852 |
Description of YMR239C: RNAase III; involved in rDNA transcription and rRNA processing; also cleaves a stem-loop structure at the 3' end of U2 snRNA to ensure formation of the correct U2 3' end; involved in polyadenylation-independent transcription termination[1][2][3][4]
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Community Commentary
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References
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- ↑ Abou Elela S and Ares M Jr (1998) Depletion of yeast RNase III blocks correct U2 3' end formation and results in polyadenylated but functional U2 snRNA. EMBO J 17(13):3738-46 SGD PMID 9649443
- ↑ Catala M, et al. (2008) Deletion of Rnt1p alters the proportion of open versus closed rRNA gene repeats in yeast. Mol Cell Biol 28(2):619-29 SGD PMID 17991894
- ↑ Elela SA, et al. (1996) RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site. Cell 85(1):115-24 SGD PMID 8620530
- ↑ Ghazal G, et al. (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109 SGD PMID 19818713
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