Difference between revisions of "YLL016W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003939 YLL016W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SDC25 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SDC25 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XII: | + | |nowrap| Chr XII:112847..115993 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000003939 |
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| − | '''Description of | + | '''Description of YLL016W:''' Non-essential Ras guanine nucleotide exchange factor (GEF); localized to the membrane; expressed in poor nutrient conditions and on nonfermentable carbon sources; contains a stop codon in S288C, full-length gene includes YLL017W; SDC25 has a paralog, CDC25, that arose from the whole genome duplication<ref name='S000046797'>Boy-Marcotte E, et al. (1989) The C-terminal part of a gene partially homologous to CDC 25 gene suppresses the cdc25-5 mutation in Saccharomyces cerevisiae. Gene 77(1):21-30 {{SGDpaper|S000046797}} PMID 2545538</ref><ref name='S000040678'>Boy-Marcotte E, et al. (1996) SDC25, a dispensable Ras guanine nucleotide exchange factor of Saccharomyces cerevisiae differs from CDC25 by its regulation. Mol Biol Cell 7(4):529-39 {{SGDpaper|S000040678}} PMID 8730097</ref><ref name='S000113653'>Byrne KP and Wolfe KH (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61 {{SGDpaper|S000113653}} PMID 16169922</ref><ref name='S000055581'>Crechet JB, et al. (2000) Analysis of the role of the hypervariable region of yeast Ras2p and its farnesylation in the interaction with exchange factors and adenylyl cyclase. J Biol Chem 275(23):17754-61 {{SGDpaper|S000055581}} PMID 10747953</ref><ref name='S000039839'>Damak F, et al. (1991) SDC25, a CDC25-like gene which contains a RAS-activating domain and is a dispensable gene of Saccharomyces cerevisiae. Mol Cell Biol 11(1):202-12 |
{{SGDpaper|S000039839}} PMID 1986220</ref> | {{SGDpaper|S000039839}} PMID 1986220</ref> | ||
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==Community Commentary== | ==Community Commentary== | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 14:05, 12 September 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YLL016W |
| Gene name | SDC25 |
| Aliases | |
| Feature type | pseudogene |
| Coordinates | Chr XII:112847..115993 |
| Primary SGDID | S000003939 |
Description of YLL016W: Non-essential Ras guanine nucleotide exchange factor (GEF); localized to the membrane; expressed in poor nutrient conditions and on nonfermentable carbon sources; contains a stop codon in S288C, full-length gene includes YLL017W; SDC25 has a paralog, CDC25, that arose from the whole genome duplication[1][2][3][4][5]
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Contents
Community Commentary
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References
See Help:References on how to add references
- ↑ Boy-Marcotte E, et al. (1989) The C-terminal part of a gene partially homologous to CDC 25 gene suppresses the cdc25-5 mutation in Saccharomyces cerevisiae. Gene 77(1):21-30 SGD PMID 2545538
- ↑ Boy-Marcotte E, et al. (1996) SDC25, a dispensable Ras guanine nucleotide exchange factor of Saccharomyces cerevisiae differs from CDC25 by its regulation. Mol Biol Cell 7(4):529-39 SGD PMID 8730097
- ↑ Byrne KP and Wolfe KH (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61 SGD PMID 16169922
- ↑ Crechet JB, et al. (2000) Analysis of the role of the hypervariable region of yeast Ras2p and its farnesylation in the interaction with exchange factors and adenylyl cyclase. J Biol Chem 275(23):17754-61 SGD PMID 10747953
- ↑ Damak F, et al. (1991) SDC25, a CDC25-like gene which contains a RAS-activating domain and is a dispensable gene of Saccharomyces cerevisiae. Mol Cell Biol 11(1):202-12 SGD PMID 1986220
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