Difference between revisions of "YHL043W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001035 YHL043W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''ECM34 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''ECM34 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr VIII: | + | |nowrap| Chr VIII:14901..15413 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000001035 |
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| − | '''Description of | + | '''Description of YHL043W:''' Putative protein of unknown function; member of the DUP380 subfamily of conserved, often subtelomerically-encoded proteins<ref name='S000113644'>Despons L, et al. (2006) An evolutionary scenario for one of the largest yeast gene families. Trends Genet 22(1):10-5 |
| − | + | {{SGDpaper|S000113644}} PMID 16269202</ref> | |
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__TOC__ | __TOC__ | ||
==Community Commentary== | ==Community Commentary== | ||
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| + | === DNA and RNA Details === | ||
| + | [[Category:Topic:DNA and RNA Details]] | ||
| + | ==== Other DNA and RNA Details ==== | ||
| + | [[Category:Topic:DNA and RNA Details:Other DNA and RNA Details]] | ||
| + | '''Other Topic''': evolution [[Category:Topic:evolution]] | ||
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| + | The SSU1-R allele, which confers sulfite resistance to yeast cells, is the product of a reciprocal translocation between chromosomes VIII and XVI due to unequal crossing-over mediated by microhomology between very short sequences on the 5' upstream regions of the SSU1 and ECM34 genes. We show that this translocation is only present in wine yeast strains, suggesting that the use for millennia of sulfite as a preservative in wine production could have favoured its selection. <ref name='S000071569'>Perez-Ortin JE, et al. (2002) Molecular characterization of a chromosomal rearrangement involved in the adaptive evolution of yeast strains. Genome Res 12(10):1533-9 {{SGDpaper|S000071569}} PMID 12368245</ref> <ref name = 'CAset4569-2004-06-04'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=4569 Jose E. Perez-Ortin] on 2004-06-04</ref> | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YHL043W |
| Gene name | ECM34 |
| Aliases | |
| Feature type | ORF, Verified |
| Coordinates | Chr VIII:14901..15413 |
| Primary SGDID | S000001035 |
Description of YHL043W: Putative protein of unknown function; member of the DUP380 subfamily of conserved, often subtelomerically-encoded proteins[1]
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Contents
Community Commentary
About Community Commentary. Please share your knowledge!
DNA and RNA Details
Other DNA and RNA Details
Other Topic: evolution
The SSU1-R allele, which confers sulfite resistance to yeast cells, is the product of a reciprocal translocation between chromosomes VIII and XVI due to unequal crossing-over mediated by microhomology between very short sequences on the 5' upstream regions of the SSU1 and ECM34 genes. We show that this translocation is only present in wine yeast strains, suggesting that the use for millennia of sulfite as a preservative in wine production could have favoured its selection. [2] [3]
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References
See Help:References on how to add references
- ↑ Despons L, et al. (2006) An evolutionary scenario for one of the largest yeast gene families. Trends Genet 22(1):10-5 SGD PMID 16269202
- ↑ Perez-Ortin JE, et al. (2002) Molecular characterization of a chromosomal rearrangement involved in the adaptive evolution of yeast strains. Genome Res 12(10):1533-9 SGD PMID 12368245
- ↑ submitted by Jose E. Perez-Ortin on 2004-06-04
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