Difference between revisions of "YGL213C"
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| − | '''Description of YGL213C:''' | + | '''Description of YGL213C:''' Ski complex component and WD-repeat protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome; also required for meiotic double-strand break recombination; null mutants have superkiller phenotype<ref name='S000080394'>Madrona AY and Wilson DK (2004) The structure of Ski8p, a protein regulating mRNA degradation: Implications for WD protein structure. Protein Sci 13(6):1557-65 {{SGDpaper|S000080394}} PMID 15152089</ref><ref name='S000077536'>Cheng Z, et al. (2004) Crystal structure of Ski8p, a WD-repeat protein with dual roles in mRNA metabolism and meiotic recombination. Protein Sci 13(10):2673-84 {{SGDpaper|S000077536}} PMID 15340168</ref><ref name='S000075846'>Arora C, et al. (2004) Antiviral protein Ski8 is a direct partner of Spo11 in meiotic DNA break formation, independent of its cytoplasmic role in RNA metabolism. Mol Cell 13(4):549-59 {{SGDpaper|S000075846}} PMID 14992724</ref><ref name='S000058465'>Anderson JS and Parker RP (1998) The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex. EMBO J 17(5):1497-506 {{SGDpaper|S000058465}} PMID 9482746</ref><ref name='S000054260'>Ridley SP, et al. (1984) Superkiller mutations in Saccharomyces cerevisiae suppress exclusion of M2 double-stranded RNA by L-A-HN and confer cold sensitivity in the presence of M and L-A-HN. Mol Cell Biol 4(4):761-70 {{SGDpaper|S000054260}} PMID 6371496</ref><ref name='S000045264'>Brown JT, et al. (2000) The yeast antiviral proteins Ski2p, Ski3p, and Ski8p exist as a complex in vivo. RNA 6(3):449-57 |
{{SGDpaper|S000045264}} PMID 10744028</ref> | {{SGDpaper|S000045264}} PMID 10744028</ref> | ||
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Revision as of 14:05, 19 March 2009
Share your knowledge...Edit this entry! <protect>
| Systematic name | YGL213C |
| Gene name | SKI8 |
| Aliases | REC103 |
| Feature type | ORF, Verified |
| Coordinates | Chr VII:91251..90058 |
| Primary SGDID | S000003181 |
Description of YGL213C: Ski complex component and WD-repeat protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome; also required for meiotic double-strand break recombination; null mutants have superkiller phenotype[1][2][3][4][5][6]
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Contents
Community Commentary
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Interactions
Two Hybrid
Two Hybrid interaction with spo11
[3] [7]
Protein Details
Protein Localization
cytoplasmic localization during vegetative growth, relocalizes to nucleus and onto chromosomes during meiosis [3] [7]
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References
See Help:References on how to add references
- ↑ Madrona AY and Wilson DK (2004) The structure of Ski8p, a protein regulating mRNA degradation: Implications for WD protein structure. Protein Sci 13(6):1557-65 SGD PMID 15152089
- ↑ Cheng Z, et al. (2004) Crystal structure of Ski8p, a WD-repeat protein with dual roles in mRNA metabolism and meiotic recombination. Protein Sci 13(10):2673-84 SGD PMID 15340168
- ↑ 3.0 3.1 3.2 Arora C, et al. (2004) Antiviral protein Ski8 is a direct partner of Spo11 in meiotic DNA break formation, independent of its cytoplasmic role in RNA metabolism. Mol Cell 13(4):549-59 SGD PMID 14992724
- ↑ Anderson JS and Parker RP (1998) The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex. EMBO J 17(5):1497-506 SGD PMID 9482746
- ↑ Ridley SP, et al. (1984) Superkiller mutations in Saccharomyces cerevisiae suppress exclusion of M2 double-stranded RNA by L-A-HN and confer cold sensitivity in the presence of M and L-A-HN. Mol Cell Biol 4(4):761-70 SGD PMID 6371496
- ↑ Brown JT, et al. (2000) The yeast antiviral proteins Ski2p, Ski3p, and Ski8p exist as a complex in vivo. RNA 6(3):449-57 SGD PMID 10744028
- ↑ 7.0 7.1 submitted by Scott Keeney on 2004-05-02
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