Difference between revisions of "YDL126C"

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'''Description of YDL126C:''' ATPase involved in ubiquitin-mediated protein degradation; Cdc48p-Npl4p-Ufd1p complex participates in ER-associated degradation (ERAD) while Cdc48p-Npl4p-Vms1p complex participates in mitochondria-associated degradation (MAD); along with Npl4-Ufd1 complex, important for maintaining the cell wall integrity during heat stress to allow G1 progression; controls the proteasome-mediated degradation of Sec23p; mediates UV-induced degradation of ubiquitinated chromatin-bound Rpb1p<ref name='S000140158'>Heo JM, et al. (2010) A stress-responsive system for mitochondrial protein degradation. Mol Cell 40(3):465-80 {{SGDpaper|S000140158}} PMID 21070972</ref><ref name='S000145187'>Hsieh MT and Chen RH (2011) Cdc48 and Cofactors Npl4-Ufd1 Are Important for G1 Progression during Heat Stress by Maintaining Cell Wall Integrity in Saccharomyces cerevisiae. PLoS One 6(4):e18988 {{SGDpaper|S000145187}} PMID 21526151</ref><ref name='S000143769'>Ossareh-Nazari B, et al. (2010) The Rsp5 ubiquitin ligase and the AAA-ATPase Cdc48 control the ubiquitin-mediated degradation of the COPII component Sec23. Exp Cell Res 316(20):3351-7 {{SGDpaper|S000143769}} PMID 20846524</ref><ref name='S000144434'>Verma R, et al. (2011) Cdc48/p97 mediates UV-dependent turnover of RNA Pol II. Mol Cell 41(1):82-92 {{SGDpaper|S000144434}} PMID 21211725</ref><ref name='S000073828'>Ye Y, et al. (2003) Function of the p97-Ufd1-Npl4 complex in retrotranslocation from the ER to the cytosol: dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains. J Cell Biol 162(1):71-84
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'''Description of YDL126C:''' AAA ATPase involved in multiple processes; subunit of a polyubiquitin-selective segregase complex involved in ERAD, cell wall integrity during heat stress and mitotic spindle disassembly; subunit of a complex involved in mitochondria-associated degradation; role in mobilizing membrane bound transcription factors by regulated ubiquitin/proteasome-dependent processing; roles in macroautophagy, PMN, ribophagy, and homotypic ER membrane fusion; functional ortholog of p97/VCP<ref name='S000075012'>Cao K, et al. (2003) The AAA-ATPase Cdc48/p97 regulates spindle disassembly at the end of mitosis. Cell 115(3):355-67 {{SGDpaper|S000075012}} PMID 14636562</ref><ref name='S000140158'>Heo JM, et al. (2010) A stress-responsive system for mitochondrial protein degradation. Mol Cell 40(3):465-80 {{SGDpaper|S000140158}} PMID 21070972</ref><ref name='S000145187'>Hsieh MT and Chen RH (2011) Cdc48 and Cofactors Npl4-Ufd1 Are Important for G1 Progression during Heat Stress by Maintaining Cell Wall Integrity in Saccharomyces cerevisiae. PLoS One 6(4):e18988 {{SGDpaper|S000145187}} PMID 21526151</ref><ref name='S000134208'>Ossareh-Nazari B, et al. (2010) Cdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy. EMBO Rep 11(7):548-54 {{SGDpaper|S000134208}} PMID 20508643</ref><ref name='S000074009'>Rape M, et al. (2001) Mobilization of processed, membrane-tethered SPT23 transcription factor by CDC48(UFD1/NPL4), a ubiquitin-selective chaperone. Cell 107(5):667-77 {{SGDpaper|S000074009}} PMID 11733065</ref><ref name='S000123640'>Shcherbik N and Haines DS (2007) Cdc48p(Npl4p/Ufd1p) binds and segregates membrane-anchored/tethered complexes via a polyubiquitin signal present on the anchors. Mol Cell 25(3):385-97 {{SGDpaper|S000123640}} PMID 17289586</ref><ref name='S000150023'>Stolz A, et al. (2011) Cdc48: a power machine in protein degradation. Trends Biochem Sci 36(10):515-23 {{SGDpaper|S000150023}} PMID 21741246</ref><ref name='S000073828'>Ye Y, et al. (2003) Function of the p97-Ufd1-Npl4 complex in retrotranslocation from the ER to the cytosol: dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains. J Cell Biol 162(1):71-84
 
  {{SGDpaper|S000073828}} PMID 12847084</ref>
 
  {{SGDpaper|S000073828}} PMID 12847084</ref>
 
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Latest revision as of 14:05, 3 July 2012

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Systematic name YDL126C
Gene name CDC48
Aliases
Feature type ORF, Verified
Coordinates Chr IV:238664..236157
Primary SGDID S000002284


Description of YDL126C: AAA ATPase involved in multiple processes; subunit of a polyubiquitin-selective segregase complex involved in ERAD, cell wall integrity during heat stress and mitotic spindle disassembly; subunit of a complex involved in mitochondria-associated degradation; role in mobilizing membrane bound transcription factors by regulated ubiquitin/proteasome-dependent processing; roles in macroautophagy, PMN, ribophagy, and homotypic ER membrane fusion; functional ortholog of p97/VCP[1][2][3][4][5][6][7][8]




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References

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  1. Cao K, et al. (2003) The AAA-ATPase Cdc48/p97 regulates spindle disassembly at the end of mitosis. Cell 115(3):355-67 SGD PMID 14636562
  2. Heo JM, et al. (2010) A stress-responsive system for mitochondrial protein degradation. Mol Cell 40(3):465-80 SGD PMID 21070972
  3. Hsieh MT and Chen RH (2011) Cdc48 and Cofactors Npl4-Ufd1 Are Important for G1 Progression during Heat Stress by Maintaining Cell Wall Integrity in Saccharomyces cerevisiae. PLoS One 6(4):e18988 SGD PMID 21526151
  4. Ossareh-Nazari B, et al. (2010) Cdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy. EMBO Rep 11(7):548-54 SGD PMID 20508643
  5. Rape M, et al. (2001) Mobilization of processed, membrane-tethered SPT23 transcription factor by CDC48(UFD1/NPL4), a ubiquitin-selective chaperone. Cell 107(5):667-77 SGD PMID 11733065
  6. Shcherbik N and Haines DS (2007) Cdc48p(Npl4p/Ufd1p) binds and segregates membrane-anchored/tethered complexes via a polyubiquitin signal present on the anchors. Mol Cell 25(3):385-97 SGD PMID 17289586
  7. Stolz A, et al. (2011) Cdc48: a power machine in protein degradation. Trends Biochem Sci 36(10):515-23 SGD PMID 21741246
  8. Ye Y, et al. (2003) Function of the p97-Ufd1-Npl4 complex in retrotranslocation from the ER to the cytosol: dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains. J Cell Biol 162(1):71-84 SGD PMID 12847084

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