Difference between revisions of "UW-Stout/Voltage SP23"

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(Final Protocol (Knockout Experiment))
(Final Protocol (Knockout Experiment))
Line 42: Line 42:
 
*0.1 Lithium Acetate
 
*0.1 Lithium Acetate
 
*Room Temperature Electroporation Buffer (1M D-Sorbitol)
 
*Room Temperature Electroporation Buffer (1M D-Sorbitol)
*Wild Type Yeast Culture
+
*Knockout yeast strains
  
 
'''Equipment'''  
 
'''Equipment'''  

Revision as of 12:31, 2 May 2023

Pilot Experiment

Materials

  • Ice Cold Water
  • Ice-Cold Electroporation Buffer (1M D-Sorbitol)
  • 0.1 Lithium Acetate
  • Room Temperature Electroporation Buffer (1M D-Sorbitol)
  • Wild Type Yeast Culture

Equipment

  • Electroporator
  • Electroporation Cuvettes (Pre-Chilled)
  • Centrifuge
  • Incubator (30 Degrees Celsius)
  • T200 Micropipettor
  • Microcentrifuge Tubes
  • Biosafety Cabinet
  • YPD Plates

Protocol

  1. Item 1 Pipette 110 microliters of wild type yeast culture into microcentrifuge tube.
  2. Item 2 Wash the cell pellet twice with 200 microliters of ice-cold water at 4500 rpm for 5 min. Discard supernatant.
  3. Item 3 Wash the cell pellet once with 200 microliters of ice-cold electroporation buffer (1M D-sorbitol) at 4500 rpm for 5 min. Discard supernatant.
  4. Item 4 Wash the cell pellet with 200 microliters 0.1 M Lithium Acetate at 4500 rpm for 5 min. Discard supernatant.
  5. Item 5 Wash the cell pellet once with 200 microliters of ice-cold electroporation buffer at 4500 rpm for 5 min. Discard supernatant.
  6. Item 6 Suspend the pellet in 200 microliters of electroporation buffer. (Keep cells on ice until electroporation).
  7. Item 7 Insert 100 microliters of the mixture into pre-chilled electroporation cuvette. Keep cuvette on ice for 5 minutes before electroporation.
  8. Item 8 Electroporate the cells at wanted voltage.
  9. Item 9 Insert 100 microliters of YPD into cuvette and place 50 microliters of the mixture on YPD plates to be examined. Place 50 microliters of the non-electroporated mixture onto negative control plates.

Data

Interpretation Based on the results of the pilot experiment, we decided on 2.5kV electroporation. This voltage showed the greatest amount of cell stress/death. This was the highest voltage tested.

Final Protocol (Knockout Experiment)

Materials

  • Ice Cold Water
  • Ice-Cold Electroporation Buffer (1M D-Sorbitol)
  • 0.1 Lithium Acetate
  • Room Temperature Electroporation Buffer (1M D-Sorbitol)
  • Knockout yeast strains

Equipment

  • Electroporator
  • Electroporation Cuvettes (Pre-Chilled)
  • Centrifuge
  • Incubator (30 Degrees Celsius)
  • T200 Micropipettor
  • Microcentrifuge Tubes
  • Biosafety Cabinet
  • YPD Plates


  1. Item 1 Pipette 110 microliters of each knockout strain into microcentrifuge tubes.
  2. Item 2 Wash the cell pellets twice with 200 microliters of ice-cold water at 4500 rpm for 5 min. Discard supernatant.
  3. Item 3 Wash the cell pellets once with 200 microliters of ice-cold electroporation buffer (1M D-sorbitol) at 4500 rpm for 5 min. Discard supernatant.
  4. Item 4 Wash the cell pellets with 200 microliters 0.1 M Lithium Acetate at 4500 rpm for 5 min. Discard supernatant.
  5. Item 5 Wash the cell pellets once with 200 microliters of ice-cold electroporation buffer at 4500 rpm for 5 min. Discard supernatant.
  6. Item 6 Suspend the pellets in 200 microliters of electroporation buffer. (Keep cells on ice until electroporation).
  7. Item 7 Insert 100 microliters of each mixture into pre-chilled electroporation cuvettes. Keep cuvettes on ice for 5 minutes before electroporation.
  8. Item 8 Electroporate the cells at 2.5kV.
  9. Item 9 Insert 100 microliters of YPD into each cuvette and place 50 microliters of each mixture on YPD plates to be examined. Place 50 microliters of the non-electroporated mixture onto negative control plates.