Difference between revisions of "RDN5-1"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000006479 RDN5-1] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''RDN5-1 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''RDN5-1 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XII: | + | |nowrap| Chr XII:459676..459796 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000006479 |
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| − | '''Description of | + | '''Description of RDN5-1:''' 5S ribosomal RNA (5S rRNA); only complete sequence of 6 repeated RDN5 alleles; able to support viability when provided as sole form of 5S rRNA; component of the large (60S) ribosomal subunit; localized to the nucleolus via interaction with Rpl5p; may play a role in translational frame fidelity; transcription is mediated by PolIII and activated by TFIIIA and TFIIIE<ref name='S000045219'>Camier S, et al. (1995) The only essential function of TFIIIA in yeast is the transcription of 5S rRNA genes. Proc Natl Acad Sci U S A 92(20):9338-42 {{SGDpaper|S000045219}} PMID 7568129</ref><ref name='S000128766'>Dieci G, et al. (2009) Positive modulation of RNA polymerase III transcription by ribosomal proteins. Biochem Biophys Res Commun 379(2):489-93 {{SGDpaper|S000128766}} PMID 19116144</ref><ref name='S000044861'>Dinman JD and Wickner RB (1995) 5 S rRNA is involved in fidelity of translational reading frame. Genetics 141(1):95-105 {{SGDpaper|S000044861}} PMID 8536994</ref><ref name='S000086205'>Kiparisov S, et al. (2005) Structural and functional analysis of 5S rRNA in Saccharomyces cerevisiae. Mol Genet Genomics 274(3):235-47 {{SGDpaper|S000086205}} PMID 16047201</ref><ref name='S000075498'>Michael WM and Dreyfuss G (1996) Distinct domains in ribosomal protein L5 mediate 5 S rRNA binding and nucleolar localization. J Biol Chem 271(19):11571-4 |
| − | {{SGDpaper| | + | {{SGDpaper|S000075498}} PMID 8626719</ref> |
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==Community Commentary== | ==Community Commentary== | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | RDN5-1 |
| Gene name | RDN5-1 |
| Aliases | RDN5 |
| Feature type | rRNA |
| Coordinates | Chr XII:459676..459796 |
| Primary SGDID | S000006479 |
Description of RDN5-1: 5S ribosomal RNA (5S rRNA); only complete sequence of 6 repeated RDN5 alleles; able to support viability when provided as sole form of 5S rRNA; component of the large (60S) ribosomal subunit; localized to the nucleolus via interaction with Rpl5p; may play a role in translational frame fidelity; transcription is mediated by PolIII and activated by TFIIIA and TFIIIE[1][2][3][4][5]
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Contents
Community Commentary
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References
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- ↑ Camier S, et al. (1995) The only essential function of TFIIIA in yeast is the transcription of 5S rRNA genes. Proc Natl Acad Sci U S A 92(20):9338-42 SGD PMID 7568129
- ↑ Dieci G, et al. (2009) Positive modulation of RNA polymerase III transcription by ribosomal proteins. Biochem Biophys Res Commun 379(2):489-93 SGD PMID 19116144
- ↑ Dinman JD and Wickner RB (1995) 5 S rRNA is involved in fidelity of translational reading frame. Genetics 141(1):95-105 SGD PMID 8536994
- ↑ Kiparisov S, et al. (2005) Structural and functional analysis of 5S rRNA in Saccharomyces cerevisiae. Mol Genet Genomics 274(3):235-47 SGD PMID 16047201
- ↑ Michael WM and Dreyfuss G (1996) Distinct domains in ribosomal protein L5 mediate 5 S rRNA binding and nucleolar localization. J Biol Chem 271(19):11571-4 SGD PMID 8626719
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