Difference between revisions of "FTP Sequence"
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| − | = FTP: data_download/sequence = | + | = FTP: [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence Sequence] = |
Contains all S. cerivisiae DNA and protein sequence data | Contains all S. cerivisiae DNA and protein sequence data | ||
| − | == data_download/sequence/GenBank == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/GenBank GenBank ]== |
FASTA files of all publicly available S. cerevisiae sequences, both | FASTA files of all publicly available S. cerevisiae sequences, both | ||
DNA and protein from NCBI. | DNA and protein from NCBI. | ||
| − | == data_download/sequence/NCBI_genome_source == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/NCBI_genome_source NCBI Genome Source ]== |
FASTA, NCBI Sequin and ASN.1 format files that are the source of the | FASTA, NCBI Sequin and ASN.1 format files that are the source of the | ||
information at NCBI on the S. cerevisiae genome (NCBI genome section). | information at NCBI on the S. cerevisiae genome (NCBI genome section). | ||
| − | == data_download/sequence/cDNA == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/cDNA cDNA ]== |
Collection of cDNA (EST) sequences from budding yeast. | Collection of cDNA (EST) sequences from budding yeast. | ||
| − | == data_download/sequence/genomic_sequence | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence Genomic Sequence] == |
Root for directories providing a variety of sequence datasets derived | Root for directories providing a variety of sequence datasets derived | ||
from the systematic S. cerevisiae genome sequence. | from the systematic S. cerevisiae genome sequence. | ||
| − | == data_download/sequence/genomic_sequence/chromosomes | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/chromosomes Chromosomes ] == |
Genomic sequence as GCG or FASTA files for each chromosome. | Genomic sequence as GCG or FASTA files for each chromosome. | ||
| − | == data_download/sequence/genomic_sequence/intergenic | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/intergenic Intergenic Regions ] == |
Intergenic Sequences | Intergenic Sequences | ||
| − | == data_download/sequence/genomic_sequence/orf_dna | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/orf_dna ORF DNA] == |
ORF DNA sequences and UTR sequences | ORF DNA sequences and UTR sequences | ||
| − | == data_download/sequence/genomic_sequence/orf_protein | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/orf_protein ORF Protein] == |
ORF translations | ORF translations | ||
| − | == data_download/sequence/genomic_sequence/other_features == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/other_features Other Features ]== |
Non-ORF datasets | Non-ORF datasets | ||
| − | == data_download/sequence/genomic_sequence/rna | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/rna RNA features and sequences ] == |
RNA gene sequences | RNA gene sequences | ||
| − | == data_download/sequence/vector | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/vector Vector ] == |
Yeast vector sequences | Yeast vector sequences | ||
Revision as of 11:57, 22 June 2007
Contents
FTP: Sequence
Contains all S. cerivisiae DNA and protein sequence data
GenBank
FASTA files of all publicly available S. cerevisiae sequences, both DNA and protein from NCBI.
NCBI Genome Source
FASTA, NCBI Sequin and ASN.1 format files that are the source of the information at NCBI on the S. cerevisiae genome (NCBI genome section).
cDNA
Collection of cDNA (EST) sequences from budding yeast.
Genomic Sequence
Root for directories providing a variety of sequence datasets derived from the systematic S. cerevisiae genome sequence.
Chromosomes
Genomic sequence as GCG or FASTA files for each chromosome.
Intergenic Regions
Intergenic Sequences
ORF DNA
ORF DNA sequences and UTR sequences
ORF Protein
ORF translations
Other Features
Non-ORF datasets
RNA features and sequences
RNA gene sequences
Vector
Yeast vector sequences
