Difference between revisions of "FTP Sequence"
| Line 1: | Line 1: | ||
| − | = FTP: [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence | + | = FTP Site [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence Sequence] | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/README README] = |
Contains all S. cerivisiae DNA and protein sequence data | Contains all S. cerivisiae DNA and protein sequence data | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/GenBank GenBank ]== | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/GenBank GenBank ] | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/GenBank/README README]== |
FASTA files of all publicly available S. cerevisiae sequences, both | FASTA files of all publicly available S. cerevisiae sequences, both | ||
DNA and protein from NCBI. | DNA and protein from NCBI. | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/NCBI_genome_source NCBI Genome Source ]== | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/NCBI_genome_source NCBI Genome Source ] | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/NCBI_genome_source/README README]== |
FASTA, NCBI Sequin and ASN.1 format files that are the source of the | FASTA, NCBI Sequin and ASN.1 format files that are the source of the | ||
information at NCBI on the S. cerevisiae genome (NCBI genome section). | information at NCBI on the S. cerevisiae genome (NCBI genome section). | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/cDNA cDNA ]== | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/cDNA cDNA | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence//README README]== |
Collection of cDNA (EST) sequences from budding yeast. | Collection of cDNA (EST) sequences from budding yeast. | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence Genomic Sequence] == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence Genomic Sequence] | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/README README] == |
Root for directories providing a variety of sequence datasets derived | Root for directories providing a variety of sequence datasets derived | ||
from the systematic S. cerevisiae genome sequence. | from the systematic S. cerevisiae genome sequence. | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/chromosomes Chromosomes ] == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/chromosomes Chromosomes ] | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/chromosomes/README README] == |
Genomic sequence as GCG or FASTA files for each chromosome. | Genomic sequence as GCG or FASTA files for each chromosome. | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/intergenic Intergenic Regions ] == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/intergenic Intergenic Regions ] | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/intergenic/README README] == |
Intergenic Sequences | Intergenic Sequences | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/orf_dna ORF DNA] == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/orf_dna ORF DNA] | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/orf_dna/README README] == |
ORF DNA sequences and UTR sequences | ORF DNA sequences and UTR sequences | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/orf_protein ORF Protein] == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/orf_protein ORF Protein] | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/orf_protein/README README]== |
ORF translations | ORF translations | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/other_features Other Features ]== | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/other_features Other Features ] | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/other_features/README README]== |
Non-ORF datasets | Non-ORF datasets | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/rna RNA features and sequences ] == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/rna RNA features and sequences ] |[ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/genomic_sequence/rna/README README ]== |
RNA gene sequences | RNA gene sequences | ||
| − | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/vector Vector ] == | + | == [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/vector Vector ] |[ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence/vector/README README] == |
Yeast vector sequences | Yeast vector sequences | ||
Revision as of 12:46, 22 June 2007
Contents
- 1 FTP Site Sequence | README
- 1.1 GenBank | README
- 1.2 NCBI Genome Source | README
- 1.3 cDNA | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence//README README
- 1.4 Genomic Sequence | README
- 1.5 Chromosomes | README
- 1.6 Intergenic Regions | README
- 1.7 ORF DNA | README
- 1.8 ORF Protein | README
- 1.9 Other Features | README
- 1.10 RNA features and sequences |README
- 1.11 Vector |README
FTP Site Sequence | README
Contains all S. cerivisiae DNA and protein sequence data
GenBank | README
FASTA files of all publicly available S. cerevisiae sequences, both DNA and protein from NCBI.
NCBI Genome Source | README
FASTA, NCBI Sequin and ASN.1 format files that are the source of the information at NCBI on the S. cerevisiae genome (NCBI genome section).
cDNA | [ftp://ftp.yeastgenome.org/pub/yeast/data_download/sequence//README README
Collection of cDNA (EST) sequences from budding yeast.
Genomic Sequence | README
Root for directories providing a variety of sequence datasets derived from the systematic S. cerevisiae genome sequence.
Chromosomes | README
Genomic sequence as GCG or FASTA files for each chromosome.
Intergenic Regions | README
Intergenic Sequences
ORF DNA | README
ORF DNA sequences and UTR sequences
ORF Protein | README
ORF translations
Other Features | README
Non-ORF datasets
RNA features and sequences |README
RNA gene sequences
Vector |README
Yeast vector sequences
