Difference between revisions of "Chromosome VII History"
(Created page with "=Sequence Changes= {| border="1" class="wikitable" style="border-spacing: 2px; border: 1px solid darkgray;" ! Date !! Affected Features !! Start Coordinate of Change !! End...") |
|||
| Line 3: | Line 3: | ||
{| border="1" class="wikitable" style="border-spacing: 2px; border: 1px solid darkgray;" | {| border="1" class="wikitable" style="border-spacing: 2px; border: 1px solid darkgray;" | ||
! Date !! Affected Features !! Start Coordinate of Change !! End Coordinate of Change !! Type of Change !! Old Sequence !! New Sequence | ! Date !! Affected Features !! Start Coordinate of Change !! End Coordinate of Change !! Type of Change !! Old Sequence !! New Sequence | ||
| − | |- | + | |- style="height:30px; width:30px; text-align:center;" |
| 2011-02-03|| YGR067C|| 622408|| 622408|| Substitution|| A|| T | | 2011-02-03|| YGR067C|| 622408|| 622408|| Substitution|| A|| T | ||
|- | |- | ||
| Line 10: | Line 10: | ||
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||
Old 622366 TCTTTGGCCATTATTTTATTTGGCTAAAAATTTCAATGTTTTAACTTTGTTTATTGTCAG 622425</pre> | Old 622366 TCTTTGGCCATTATTTTATTTGGCTAAAAATTTCAATGTTTTAACTTTGTTTATTGTCAG 622425</pre> | ||
| + | Engel SR, et al. (2014) The reference genome sequence of Saccharomyces cerevisiae: then and now. G3 (Bethesda) 4(3):389-98 | ||
| + | |||
| + | |- style="height:30px; width:30px; text-align:center;" | ||
| + | | 2011-02-03|| YGL197W|| 125909|| 125910|| Substitution|| CG|| GC | ||
| + | |- style="height:30px; width:30px; text-align:center;" | ||
| + | | || || 125487|| 125487|| Insertion|| || A | ||
| + | |- style="height:30px; width:30px; text-align:center;" | ||
| + | | || || 125495|| 125495|| Deletion|| A|| | ||
| + | |- | ||
| + | | || colspan="6" | Nucleotide changes within the coding region of MDS3/YGL197W resulted in an altered protein sequence. The start, stop, and reading frame remain the same, but protein residues 262-264 are now QSE rather than HPK, and residue 403 is now Alanine rather than Arginine. | ||
| + | <pre>New 125449 TAGACATCTATAACATCTCACAGAATTGCTGGCAATCCGAAA-CCATACCCAAACAACCG 125507 | ||
| + | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||
| + | Old 125454 TAGACATCTATAACATCTCACAGAATTGCTGGCA-TCCGAAAACCATACCCAAACAACCG 125512 | ||
| + | |||
| + | New 125868 ATATACGATATTAACTCCGGAAAGTGGTCACGAGTCGCTACCGCCTGCCCTGACTGCGAT 125927 | ||
| + | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||
| + | Old 125873 ATATACGATATTAACTCCGGAAAGTGGTCACGAGTCCGTACCGCCTGCCCTGACTGCGAT 125932</pre> | ||
Engel SR, et al. (2014) The reference genome sequence of Saccharomyces cerevisiae: then and now. G3 (Bethesda) 4(3):389-98 | Engel SR, et al. (2014) The reference genome sequence of Saccharomyces cerevisiae: then and now. G3 (Bethesda) 4(3):389-98 | ||
Revision as of 08:36, 27 September 2019
Sequence Changes
| Date | Affected Features | Start Coordinate of Change | End Coordinate of Change | Type of Change | Old Sequence | New Sequence |
|---|---|---|---|---|---|---|
| 2011-02-03 | YGR067C | 622408 | 622408 | Substitution | A | T |
A single nucleotide substitution was made in the stop codon of ORF YGR067C, destroying it and increasing the length of the annotated protein by 10 amino acids.
New 622362 TCTTTGGCCATTATTTTATTTGGCTAAAAATTTCAATGTTTTTACTTTGTTTATTGTCAG 622421
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Old 622366 TCTTTGGCCATTATTTTATTTGGCTAAAAATTTCAATGTTTTAACTTTGTTTATTGTCAG 622425
Engel SR, et al. (2014) The reference genome sequence of Saccharomyces cerevisiae: then and now. G3 (Bethesda) 4(3):389-98 | ||||||
| 2011-02-03 | YGL197W | 125909 | 125910 | Substitution | CG | GC |
| 125487 | 125487 | Insertion | A | |||
| 125495 | 125495 | Deletion | A | |||
Nucleotide changes within the coding region of MDS3/YGL197W resulted in an altered protein sequence. The start, stop, and reading frame remain the same, but protein residues 262-264 are now QSE rather than HPK, and residue 403 is now Alanine rather than Arginine.
New 125449 TAGACATCTATAACATCTCACAGAATTGCTGGCAATCCGAAA-CCATACCCAAACAACCG 125507
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Old 125454 TAGACATCTATAACATCTCACAGAATTGCTGGCA-TCCGAAAACCATACCCAAACAACCG 125512
New 125868 ATATACGATATTAACTCCGGAAAGTGGTCACGAGTCGCTACCGCCTGCCCTGACTGCGAT 125927
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Old 125873 ATATACGATATTAACTCCGGAAAGTGGTCACGAGTCCGTACCGCCTGCCCTGACTGCGAT 125932
Engel SR, et al. (2014) The reference genome sequence of Saccharomyces cerevisiae: then and now. G3 (Bethesda) 4(3):389-98 |
||||||
