Difference between revisions of "YOL007C"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005367 YOL007C] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''CSI2 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''CSI2 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XV: | + | |nowrap| Chr XV:312367..311342 |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005367 | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005367 | ||
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| − | '''Description of YOL007C:''' Protein of unknown function; green fluorescent protein (GFP)- fusion protein localizes to the mother side of the bud neck and the vacuole; YOL007C is not an essential gene<ref name=' | + | '''Description of YOL007C:''' Protein of unknown function; green fluorescent protein (GFP)- fusion protein localizes to the mother side of the bud neck and the vacuole; YOL007C is not an essential gene<ref name='S000071347'>Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 {{SGDpaper|S000071347}} PMID 12140549</ref><ref name='S000077144'>Sundin BA, et al. (2004) Localization of proteins that are coordinately expressed with Cln2 during the cell cycle. Yeast 21(9):793-800 |
| − | {{SGDpaper| | + | {{SGDpaper|S000077144}} PMID 15282802</ref> |
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| + | ==Transmembrane Domain GxxxG like motif == | ||
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| + | The transmembrane domain of Csi2p shows homology with the SKG6/AXL2 alpha-helix transmembrane domain (IPR014805). In particular, this domain contains AGclGA. The presence of a GxxxG like motif <ref name='PMID 15313242'> Senes A, Engel DE and DeGrado WF (2004) Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs. Curr Opin Struct Biol. 2004 14(4):465-79. PMID 15313242</ref> strongly indicates that Csi2p dimerises. | ||
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<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --> | <!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --> | ||
Latest revision as of 08:40, 21 March 2013
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| Systematic name | YOL007C |
| Gene name | CSI2 |
| Aliases | |
| Feature type | ORF, Verified |
| Coordinates | Chr XV:312367..311342 |
| Primary SGDID | S000005367 |
Description of YOL007C: Protein of unknown function; green fluorescent protein (GFP)- fusion protein localizes to the mother side of the bud neck and the vacuole; YOL007C is not an essential gene[1][2]
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Community Commentary
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Transmembrane Domain GxxxG like motif
The transmembrane domain of Csi2p shows homology with the SKG6/AXL2 alpha-helix transmembrane domain (IPR014805). In particular, this domain contains AGclGA. The presence of a GxxxG like motif [3] strongly indicates that Csi2p dimerises.
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References
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- ↑ Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 SGD PMID 12140549
- ↑ Sundin BA, et al. (2004) Localization of proteins that are coordinately expressed with Cln2 during the cell cycle. Yeast 21(9):793-800 SGD PMID 15282802
- ↑ Senes A, Engel DE and DeGrado WF (2004) Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs. Curr Opin Struct Biol. 2004 14(4):465-79. PMID 15313242
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