Difference between revisions of "YER164W"
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− | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000000966 YER164W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''CHD1 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''CHD1 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
− | |nowrap| Chr V: | + | |nowrap| Chr V:505392..509798 |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000000966 | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000000966 | ||
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− | '''Description of YER164W:''' | + | '''Description of YER164W:''' Chromatin remodeler that regulates various aspects of transcription; acts in in conjunction with Isw1b to regulate chromatin structure and maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes<ref name='S000080442'>Pray-Grant MG, et al. (2005) Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation. Nature 433(7024):434-8 {{SGDpaper|S000080442}} PMID 15647753</ref><ref name='S000073040'>Simic R, et al. (2003) Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes. EMBO J 22(8):1846-56 {{SGDpaper|S000073040}} PMID 12682017</ref><ref name='S000150705'>Smolle M, et al. (2012) Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange.LID - 10.1038/nsmb.2312 [doi] Nat Struct Mol Biol () {{SGDpaper|S000150705}} PMID 22922743</ref><ref name='S000039644'>Tran HG, et al. (2000) The chromo domain protein chd1p from budding yeast is an ATP-dependent chromatin-modifying factor. EMBO J 19(10):2323-31 {{SGDpaper|S000039644}} PMID 10811623</ref><ref name='S000058212'>Woodage T, et al. (1997) Characterization of the CHD family of proteins. Proc Natl Acad Sci U S A 94(21):11472-7 |
− | {{SGDpaper| | + | {{SGDpaper|S000058212}} PMID 9326634</ref> |
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Latest revision as of 14:05, 18 September 2012
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Systematic name | YER164W |
Gene name | CHD1 |
Aliases | |
Feature type | ORF, Verified |
Coordinates | Chr V:505392..509798 |
Primary SGDID | S000000966 |
Description of YER164W: Chromatin remodeler that regulates various aspects of transcription; acts in in conjunction with Isw1b to regulate chromatin structure and maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes[1][2][3][4][5]
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References
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- ↑ Pray-Grant MG, et al. (2005) Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation. Nature 433(7024):434-8 SGD PMID 15647753
- ↑ Simic R, et al. (2003) Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes. EMBO J 22(8):1846-56 SGD PMID 12682017
- ↑ Smolle M, et al. (2012) Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange.LID - 10.1038/nsmb.2312 [doi] Nat Struct Mol Biol () SGD PMID 22922743
- ↑ Tran HG, et al. (2000) The chromo domain protein chd1p from budding yeast is an ATP-dependent chromatin-modifying factor. EMBO J 19(10):2323-31 SGD PMID 10811623
- ↑ Woodage T, et al. (1997) Characterization of the CHD family of proteins. Proc Natl Acad Sci U S A 94(21):11472-7 SGD PMID 9326634
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