Difference between revisions of "YOR359W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl? | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005886 YOR359W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''VTS1 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''VTS1 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
|nowrap| Chr XV:1011187..1012758 | |nowrap| Chr XV:1011187..1012758 | ||
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| + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005886 | ||
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| − | '''Description of | + | '''Description of YOR359W:''' Post-transcriptional gene regulator, RNA-binding protein containing a SAM domain; shows genetic interactions with Vti1p, which is a v-SNARE involved in cis-Golgi membrane traffic<ref name='S000114214'>Oberstrass FC, et al. (2006) Shape-specific recognition in the structure of the Vts1p SAM domain with RNA. Nat Struct Mol Biol 13(2):160-7 {{SGDpaper|S000114214}} PMID 16429156</ref><ref name='S000066006'>Dilcher M, et al. (2001) Genetic interactions with the yeast Q-SNARE VTI1 reveal novel functions for the R-SNARE YKT6. J Biol Chem 276(37):34537-44 |
{{SGDpaper|S000066006}} PMID 11445562</ref> | {{SGDpaper|S000066006}} PMID 11445562</ref> | ||
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J Biol Chem 278(5):3265-74</ref> | J Biol Chem 278(5):3265-74</ref> | ||
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Revision as of 07:46, 27 February 2007
Share your knowledge...Edit this entry! <protect>
| Systematic name | YOR359W |
| Gene name | VTS1 |
| Aliases | |
| Feature type | ORF, Verified |
| Coordinates | Chr XV:1011187..1012758 |
| Primary SGDID | S000005886 |
Description of YOR359W: Post-transcriptional gene regulator, RNA-binding protein containing a SAM domain; shows genetic interactions with Vti1p, which is a v-SNARE involved in cis-Golgi membrane traffic[1][2]
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Protein Details
Nucleic Acid Binding
YOR359W binds RNA Specific binding to an RNA stem-loop of CNGGN motif. Involved in CCR4 mediated deadnylation and degradation of targets. [3] [4]
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References
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- ↑ Oberstrass FC, et al. (2006) Shape-specific recognition in the structure of the Vts1p SAM domain with RNA. Nat Struct Mol Biol 13(2):160-7 SGD PMID 16429156
- ↑ Dilcher M, et al. (2001) Genetic interactions with the yeast Q-SNARE VTI1 reveal novel functions for the R-SNARE YKT6. J Biol Chem 276(37):34537-44 SGD PMID 11445562
- ↑ Aviv T, et al. (2003) The RNA-binding SAM domain of Smaug defines a new family of post-transcriptional regulators. Nat Struct Biol 10(8):614-21 SGD PMID 12858164
- ↑ submitted by Tzvi Aviv on 2003-10-10
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