Difference between revisions of "YPL016W"
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{|{{Prettytable}} align = 'right' width = '200px' | {|{{Prettytable}} align = 'right' width = '200px' | ||
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005937 YPL016W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SWI1 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SWI1 '' | ||
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||''ADR6, GAM3, LPA1'' | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||''ADR6, GAM3, LPA1, [SWI(+)], [SWI+]'' |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]] | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]] | ||
|- | |- | ||
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XVI: | + | |nowrap| Chr XVI:521014..524958 |
| + | |- | ||
| + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005937 | ||
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<br> | <br> | ||
| − | '''Description of | + | '''Description of YPL016W:''' Subunit of the SWI/SNF chromatin remodeling complex; regulates transcription by remodeling chromatin; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; can form the prion [SWI+]; human homolog ARID1A is a candidate tumor suppressor gene in breast cancer<ref name='S000058455'>Burns LG and Peterson CL (1997) Protein complexes for remodeling chromatin. Biochim Biophys Acta 1350(2):159-68 {{SGDpaper|S000058455}} PMID 9048886</ref><ref name='S000125915'>Du Z, et al. (2008) Newly identified prion linked to the chromatin-remodeling factor Swi1 in Saccharomyces cerevisiae. Nat Genet 40(4):460-5 {{SGDpaper|S000125915}} PMID 18362884</ref><ref name='S000146653'>Mamo A, et al. (2011) An integrated genomic approach identifies ARID1A as a candidate tumor-suppressor gene in breast cancer.LID - 10.1038/onc.2011.386 [doi] Oncogene () {{SGDpaper|S000146653}} PMID 21892209</ref><ref name='S000047108'>Peterson CL and Herskowitz I (1992) Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcription. Cell 68(3):573-83 {{SGDpaper|S000047108}} PMID 1339306</ref><ref name='S000043500'>Peterson CL, et al. (1998) Subunits of the yeast SWI/SNF complex are members of the actin-related protein (ARP) family. J Biol Chem 273(37):23641-4 {{SGDpaper|S000043500}} PMID 9726966</ref><ref name='S000053887'>Taguchi AK and Young ET (1987) The cloning and mapping of ADR6, a gene required for sporulation and for expression of the alcohol dehydrogenase II isozyme from Saccharomyces cerevisiae. Genetics 116(4):531-40 |
| − | {{SGDpaper| | + | {{SGDpaper|S000053887}} PMID 3040523</ref> |
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<br> | <br> | ||
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==Community Commentary== | ==Community Commentary== | ||
{{CommentaryHelp}} | {{CommentaryHelp}} | ||
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| + | <!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --> | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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Latest revision as of 13:05, 13 February 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YPL016W |
| Gene name | SWI1 |
| Aliases | ADR6, GAM3, LPA1, [SWI(+)], [SWI+] |
| Feature type | ORF, Verified |
| Coordinates | Chr XVI:521014..524958 |
| Primary SGDID | S000005937 |
Description of YPL016W: Subunit of the SWI/SNF chromatin remodeling complex; regulates transcription by remodeling chromatin; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; can form the prion [SWI+]; human homolog ARID1A is a candidate tumor suppressor gene in breast cancer[1][2][3][4][5][6]
</protect>
Contents
Community Commentary
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References
See Help:References on how to add references
- ↑ Burns LG and Peterson CL (1997) Protein complexes for remodeling chromatin. Biochim Biophys Acta 1350(2):159-68 SGD PMID 9048886
- ↑ Du Z, et al. (2008) Newly identified prion linked to the chromatin-remodeling factor Swi1 in Saccharomyces cerevisiae. Nat Genet 40(4):460-5 SGD PMID 18362884
- ↑ Mamo A, et al. (2011) An integrated genomic approach identifies ARID1A as a candidate tumor-suppressor gene in breast cancer.LID - 10.1038/onc.2011.386 [doi] Oncogene () SGD PMID 21892209
- ↑ Peterson CL and Herskowitz I (1992) Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcription. Cell 68(3):573-83 SGD PMID 1339306
- ↑ Peterson CL, et al. (1998) Subunits of the yeast SWI/SNF complex are members of the actin-related protein (ARP) family. J Biol Chem 273(37):23641-4 SGD PMID 9726966
- ↑ Taguchi AK and Young ET (1987) The cloning and mapping of ADR6, a gene required for sporulation and for expression of the alcohol dehydrogenase II isozyme from Saccharomyces cerevisiae. Genetics 116(4):531-40 SGD PMID 3040523
See Help:Categories on how to add the wiki page for this gene to a Category </protect>
