Difference between revisions of "YDR422C"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000002830 YDR422C]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000002830 YDR422C]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''SIP1 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''SIP1 ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr IV:1317766..1315319
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|nowrap| Chr IV:1317773..1315326
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000002830
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000002830

Latest revision as of 06:45, 23 January 2012

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Systematic name YDR422C
Gene name SIP1
Aliases
Feature type ORF, Verified
Coordinates Chr IV:1317773..1315326
Primary SGDID S000002830


Description of YDR422C: Alternate beta-subunit of the Snf1p kinase complex, may confer substrate specificity; vacuolar protein containing KIS (Kinase-Interacting Sequence) and ASC (Association with Snf1 kinase Complex) domains involved in protein interactions[1][2][3]




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Community Commentary

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Alleles, Strains, and Phenotypes

Multiple Knockout Strains

Strain Background: Sigma1278b (Sigma2000 series)
Genotype: MCY4581
Together with: NRG2, NRG1, GAL83, SIP2
Phenotype(s): Loss of function (Null)

Deletion of SIP1 suppresses gal83's defect in invasive growth in response to glucose limitation. [4] [5]


Strain Background: Sigma1278b (Sigma2000 series)
Genotype: MCY4600
Together with: REG1, GAL83, SIP2, MUC1
Phenotype(s): Loss of function (Null)

Deletion of SIP1 in a gal83 sip2 double mutant causes an increase in invasion, suggesting Sip1 negatively regulates invasive growth. [4] [5]


Strain Background: Sigma1278b (Sigma2000 series)
Genotype: MCY4600
Together with: REG1, GAL83, SIP2, MUC1
Phenotype(s): Loss of function (Null)

Deletion of SIP1 in a gal83 sip2 double mutant causes an increase in invasion, suggesting Sip1 negatively regulates invasive growth. [4] [5]


Strain Background: Sigma1278b (Sigma2000 series)
Genotype: MCY4581
Together with: NRG2, NRG1, GAL83, SIP2
Phenotype(s): Loss of function (Null)

Deletion of SIP1 suppresses gal83's defect in invasive growth in response to glucose limitation. [4] [5]


Protein Details

Protein Function/Process

One of three alternative beta subunits of the Snf1 kinase complex [1] [6]





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References

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  1. 1.0 1.1 Schmidt MC and McCartney RR (2000) beta-subunits of Snf1 kinase are required for kinase function and substrate definition. EMBO J 19(18):4936-43 SGD PMID 10990457
  2. Schuller HJ (2003) Transcriptional control of nonfermentative metabolism in the yeast Saccharomyces cerevisiae. Curr Genet 43(3):139-60 SGD PMID 12715202
  3. Vincent O, et al. (2001) Subcellular localization of the Snf1 kinase is regulated by specific beta subunits and a novel glucose signaling mechanism. Genes Dev 15(9):1104-14 SGD PMID 11331606
  4. 4.0 4.1 4.2 4.3 Vyas VK, et al. (2003) Snf1 kinases with different beta-subunit isoforms play distinct roles in regulating haploid invasive growth. Mol Cell Biol 23(4):1341-8 SGD PMID 12556493
  5. 5.0 5.1 5.2 5.3 submitted by Valmik K. Vyas on 2003-03-27
  6. submitted by Martin C. Schmidt on 2003-02-17

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