Difference between revisions of "snR75"

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{|{{Prettytable}} align = 'right' width = '200px'
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000007309 snR75]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000007309 snR75]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''SNR75 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''SNR75 ''
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''          ||'' ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''          ||''Z5''
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''          || snoRNA[[Category:snoRNA]]
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''          || snoRNA[[Category:snoRNA]]
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr XIII:297917..298005
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|nowrap| Chr XIII:297918..298006
 
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|-
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000007309
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000007309
 
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<br>
'''Description of snR75:''' C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of large subunit (LSU) rRNA at position G2288<ref name='S000120772'>Piekna-Przybylska D, et al. (2007) New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA. RNA 13(3):305-12 {{SGDpaper|S000120772}} PMID 17283215</ref><ref name='S000058471'>Samarsky DA and Fournier MJ (1999) A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae. Nucleic Acids Res 27(1):161-4 {{SGDpaper|S000058471}} PMID 9847166</ref><ref name='S000053492'>Lowe TM and Eddy SR (1999) A computational screen for methylation guide snoRNAs in yeast. Science 283(5405):1168-71 {{SGDpaper|S000053492}} PMID 10024243</ref><ref name='S000041297'>Qu LH, et al. (1999) Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast. Mol Cell Biol 19(2):1144-58
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'''Description of snR75:''' C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of large subunit (LSU) rRNA at position G2288<ref name='S000053492'>Lowe TM and Eddy SR (1999) A computational screen for methylation guide snoRNAs in yeast. Science 283(5405):1168-71 {{SGDpaper|S000053492}} PMID 10024243</ref><ref name='S000120772'>Piekna-Przybylska D, et al. (2007) New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA. RNA 13(3):305-12 {{SGDpaper|S000120772}} PMID 17283215</ref><ref name='S000041297'>Qu LH, et al. (1999) Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast. Mol Cell Biol 19(2):1144-58 {{SGDpaper|S000041297}} PMID 9891049</ref><ref name='S000058471'>Samarsky DA and Fournier MJ (1999) A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae. Nucleic Acids Res 27(1):161-4
  {{SGDpaper|S000041297}} PMID 9891049</ref>
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  {{SGDpaper|S000058471}} PMID 9847166</ref>
 
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{{CommentaryHelp}}
 
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<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
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<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
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J Biol Chem 278(5):3265-74</ref>
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Latest revision as of 07:45, 23 January 2012

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Systematic name snR75
Gene name SNR75
Aliases Z5
Feature type snoRNA
Coordinates Chr XIII:297918..298006
Primary SGDID S000007309


Description of snR75: C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of large subunit (LSU) rRNA at position G2288[1][2][3][4]




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References

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  1. Lowe TM and Eddy SR (1999) A computational screen for methylation guide snoRNAs in yeast. Science 283(5405):1168-71 SGD PMID 10024243
  2. Piekna-Przybylska D, et al. (2007) New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA. RNA 13(3):305-12 SGD PMID 17283215
  3. Qu LH, et al. (1999) Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast. Mol Cell Biol 19(2):1144-58 SGD PMID 9891049
  4. Samarsky DA and Fournier MJ (1999) A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae. Nucleic Acids Res 27(1):161-4 SGD PMID 9847166

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