Difference between revisions of "snR30"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000007497 snR30] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SNR30 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SNR30 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XII: | + | |nowrap| Chr XII:198784..199389 |
|- | |- | ||
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000007497 | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000007497 | ||
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| − | '''Description of snR30:''' H/ACA box small nucleolar RNA (snoRNA); essential gene required for cleavage of 35S primary rRNA transcript to release the precursor to the 18S rRNA<ref name=' | + | '''Description of snR30:''' H/ACA box small nucleolar RNA (snoRNA); essential gene required for cleavage of 35S primary rRNA transcript to release the precursor to the 18S rRNA<ref name='S000074534'>Atzorn V, et al. (2004) U17/snR30 is a ubiquitous snoRNA with two conserved sequence motifs essential for 18S rRNA production. Mol Cell Biol 24(4):1769-78 {{SGDpaper|S000074534}} PMID 14749391</ref><ref name='S000051526'>Bally M, et al. (1988) SnR30: a new, essential small nuclear RNA from Saccharomyces cerevisiae. Nucleic Acids Res 16(12):5291-303 {{SGDpaper|S000051526}} PMID 2898766</ref><ref name='S000042548'>Morrissey JP and Tollervey D (1993) Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis. Mol Cell Biol 13(4):2469-77 {{SGDpaper|S000042548}} PMID 8455623</ref><ref name='S000120772'>Piekna-Przybylska D, et al. (2007) New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA. RNA 13(3):305-12 {{SGDpaper|S000120772}} PMID 17283215</ref><ref name='S000058471'>Samarsky DA and Fournier MJ (1999) A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae. Nucleic Acids Res 27(1):161-4 {{SGDpaper|S000058471}} PMID 9847166</ref><ref name='S000081218'>Schattner P, et al. (2004) Genome-wide searching for pseudouridylation guide snoRNAs: analysis of the Saccharomyces cerevisiae genome. Nucleic Acids Res 32(14):4281-96 {{SGDpaper|S000081218}} PMID 15306656</ref><ref name='S000071743'>Torchet C and Hermann-Le Denmat S (2002) High dosage of the small nucleolar RNA snR10 specifically suppresses defects of a yeast rrp5 mutant. Mol Genet Genomics 268(1):70-80 |
| − | {{SGDpaper| | + | {{SGDpaper|S000071743}} PMID 12242501</ref> |
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| + | <!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --> | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | snR30 |
| Gene name | SNR30 |
| Aliases | |
| Feature type | snoRNA |
| Coordinates | Chr XII:198784..199389 |
| Primary SGDID | S000007497 |
Description of snR30: H/ACA box small nucleolar RNA (snoRNA); essential gene required for cleavage of 35S primary rRNA transcript to release the precursor to the 18S rRNA[1][2][3][4][5][6][7]
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Contents
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References
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- ↑ Atzorn V, et al. (2004) U17/snR30 is a ubiquitous snoRNA with two conserved sequence motifs essential for 18S rRNA production. Mol Cell Biol 24(4):1769-78 SGD PMID 14749391
- ↑ Bally M, et al. (1988) SnR30: a new, essential small nuclear RNA from Saccharomyces cerevisiae. Nucleic Acids Res 16(12):5291-303 SGD PMID 2898766
- ↑ Morrissey JP and Tollervey D (1993) Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis. Mol Cell Biol 13(4):2469-77 SGD PMID 8455623
- ↑ Piekna-Przybylska D, et al. (2007) New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA. RNA 13(3):305-12 SGD PMID 17283215
- ↑ Samarsky DA and Fournier MJ (1999) A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae. Nucleic Acids Res 27(1):161-4 SGD PMID 9847166
- ↑ Schattner P, et al. (2004) Genome-wide searching for pseudouridylation guide snoRNAs: analysis of the Saccharomyces cerevisiae genome. Nucleic Acids Res 32(14):4281-96 SGD PMID 15306656
- ↑ Torchet C and Hermann-Le Denmat S (2002) High dosage of the small nucleolar RNA snR10 specifically suppresses defects of a yeast rrp5 mutant. Mol Genet Genomics 268(1):70-80 SGD PMID 12242501
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