Difference between revisions of "YOR291W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005817 YOR291W] |
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||'' '' | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''YPK9 '' |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||'' '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||'' '' | ||
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || ORF, | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]] |
|- | |- | ||
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XV: | + | |nowrap| Chr XV:861175..865593 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005817 |
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| − | '''Description of {{ | + | '''Description of YOR291W:''' Vacuolar protein with a possible role in sequestering heavy metals; has similarity to the type V P-type ATPase Spf1p; homolog of human ATP13A2 (PARK9), mutations in which are associated with Parkinson disease and Kufor-Rakeb syndrome<ref name='S000119132'>Catty P, et al. (1997) The complete inventory of the yeast Saccharomyces cerevisiae P-type transport ATPases. FEBS Lett 409(3):325-32 {{SGDpaper|S000119132}} PMID 9224683</ref><ref name='S000070157'>Cronin SR, et al. (2002) Cod1p/Spf1p is a P-type ATPase involved in ER function and Ca2+ homeostasis. J Cell Biol 157(6):1017-28 {{SGDpaper|S000070157}} PMID 12058017</ref><ref name='S000129215'>Gitler AD, et al. (2009) Alpha-synuclein is part of a diverse and highly conserved interaction network that includes PARK9 and manganese toxicity. Nat Genet 41(3):308-15 {{SGDpaper|S000129215}} PMID 19182805</ref><ref name='S000129869'>Schmidt K, et al. (2009) Cd2+, Mn2+, Ni2+ and Se2+ toxicity to Saccharomyces cerevisiae lacking YPK9p the orthologue of human ATP13A2. Biochem Biophys Res Commun 383(2):198-202 |
| + | {{SGDpaper|S000129869}} PMID 19345671</ref> | ||
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==Community Commentary== | ==Community Commentary== | ||
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| + | === Alleles, Strains, and Phenotypes === | ||
| + | [[Category:Topic:Alleles, Strains, and Phenotypes]] | ||
| + | ==== Complete Deletion ==== | ||
| + | [[Category:Topic:Alleles, Strains, and Phenotypes:Complete Deletion]] | ||
| + | '''Phenotype(s)''': No Phenotype [[Category:Phenotype:No Phenotype]], Viable [[Category:Phenotype:Viable]] | ||
| + | |||
| + | No obvious phenotypes were detected upon deletion of YOR291w with a KanMX deletion cassette. The deletion was confirmed by PCR. <ref name='S000051798'>Cronin SR, et al. (2000) Regulation of HMG-CoA reductase degradation requires the P-type ATPase Cod1p/Spf1p. J Cell Biol 148(5):915-24 {{SGDpaper|S000051798}} PMID 10704442</ref> <ref name = 'CAset1165-2003-06-13'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=1165 Stephen R. Cronin] on 2003-06-13</ref> | ||
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| + | {{ShortCenteredHR}} | ||
| + | '''Phenotype(s)''': No Phenotype [[Category:Phenotype:No Phenotype]], Viable [[Category:Phenotype:Viable]] | ||
| + | |||
| + | No obvious phenotypes were detected upon deletion of YOR291w with a KanMX deletion cassette. The deletion was confirmed by PCR. <ref name='S000051798'>Cronin SR, et al. (2000) Regulation of HMG-CoA reductase degradation requires the P-type ATPase Cod1p/Spf1p. J Cell Biol 148(5):915-24 {{SGDpaper|S000051798}} PMID 10704442</ref> <ref name = 'CAset1165-2003-06-13'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=1165 Stephen R. Cronin] on 2003-06-13</ref> | ||
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| + | {{ShortCenteredHR}} | ||
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| + | <!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --> | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YOR291W |
| Gene name | YPK9 |
| Aliases | |
| Feature type | ORF, Verified |
| Coordinates | Chr XV:861175..865593 |
| Primary SGDID | S000005817 |
Description of YOR291W: Vacuolar protein with a possible role in sequestering heavy metals; has similarity to the type V P-type ATPase Spf1p; homolog of human ATP13A2 (PARK9), mutations in which are associated with Parkinson disease and Kufor-Rakeb syndrome[1][2][3][4]
</protect>
Contents
Community Commentary
About Community Commentary. Please share your knowledge!
Alleles, Strains, and Phenotypes
Complete Deletion
Phenotype(s): No Phenotype, Viable
No obvious phenotypes were detected upon deletion of YOR291w with a KanMX deletion cassette. The deletion was confirmed by PCR. [5] [6]
Phenotype(s): No Phenotype, Viable
No obvious phenotypes were detected upon deletion of YOR291w with a KanMX deletion cassette. The deletion was confirmed by PCR. [5] [6]
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References
See Help:References on how to add references
- ↑ Catty P, et al. (1997) The complete inventory of the yeast Saccharomyces cerevisiae P-type transport ATPases. FEBS Lett 409(3):325-32 SGD PMID 9224683
- ↑ Cronin SR, et al. (2002) Cod1p/Spf1p is a P-type ATPase involved in ER function and Ca2+ homeostasis. J Cell Biol 157(6):1017-28 SGD PMID 12058017
- ↑ Gitler AD, et al. (2009) Alpha-synuclein is part of a diverse and highly conserved interaction network that includes PARK9 and manganese toxicity. Nat Genet 41(3):308-15 SGD PMID 19182805
- ↑ Schmidt K, et al. (2009) Cd2+, Mn2+, Ni2+ and Se2+ toxicity to Saccharomyces cerevisiae lacking YPK9p the orthologue of human ATP13A2. Biochem Biophys Res Commun 383(2):198-202 SGD PMID 19345671
- ↑ 5.0 5.1 Cronin SR, et al. (2000) Regulation of HMG-CoA reductase degradation requires the P-type ATPase Cod1p/Spf1p. J Cell Biol 148(5):915-24 SGD PMID 10704442
- ↑ 6.0 6.1 submitted by Stephen R. Cronin on 2003-06-13
See Help:Categories on how to add the wiki page for this gene to a Category </protect>
