Difference between revisions of "YMR090W"

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==Community Commentary==
 
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===[[UW-Stout/Growth_Curve|Growth Curve]]===
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[[File:ymr090w_growth.png]]
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In a BY4735 background, knocking out YMR090W seems to have a moderate effect on growth rate in log-phase.  In this assay, the BY4735 strain's doubling time was 124 minutes, while the YMR090W knock-out strain's doubling time was 208 minutes.
  
 
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Revision as of 20:19, 29 April 2019

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Systematic name YMR090W
Gene name
Aliases
Feature type ORF, Uncharacterized
Coordinates Chr XIII:449245..449928
Primary SGDID S000004696


Description of YMR090W: Putative protein of unknown function with similarity to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability[1][2][3]




Community Commentary

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DNA and RNA Details

Other DNA and RNA Details

Other Topic: expression

Specifically higher expression in nitrogen limited chemostat cultures versus nitrogen excess. [4] [5]


This gene is part of the UW-Stout Orphan Gene Project. Learn more here.

Growth Curve

ymr090w growth.png

In a BY4735 background, knocking out YMR090W seems to have a moderate effect on growth rate in log-phase. In this assay, the BY4735 strain's doubling time was 124 minutes, while the YMR090W knock-out strain's doubling time was 208 minutes.



References

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  1. Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 SGD PMID 12140549
  2. Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 SGD PMID 14562095
  3. Santos PM, et al. (2009) Insights into yeast adaptive response to the agricultural fungicide mancozeb: a toxicoproteomics approach. Proteomics 9(3):657-70 SGD PMID 19137554
  4. Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J Biol Chem 278(5):3265-74 SGD PMID 12414795
  5. submitted by Viktor Boer on 2003-07-25

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