Difference between revisions of "YMR090W"

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(Community Commentary)
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===[[UW-Stout/Ultraviolet Light|Ultraviolet Sensitivity]]===
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[[File:YMR090W uv light.jpeg|300 px]]
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[[File:BY4735(wild) uv light.jpg|300 px]]
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YPL068C is more sensitive than YMR090W given that there is less colonizes present when under the same stress.
  
 
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Revision as of 07:03, 2 May 2019

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Systematic name YMR090W
Gene name
Aliases
Feature type ORF, Uncharacterized
Coordinates Chr XIII:449245..449928
Primary SGDID S000004696


Description of YMR090W: Putative protein of unknown function with similarity to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability[1][2][3]




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DNA and RNA Details

Other DNA and RNA Details

Other Topic: expression

Specifically higher expression in nitrogen limited chemostat cultures versus nitrogen excess. [4] [5]


This gene is part of the UW-Stout Orphan Gene Project. Learn more here.

Growth Curve

ymr090w growth.png

In a BY4735 background, knocking out YMR090W seems to have a moderate effect on growth rate in log-phase. In this assay, the BY4735 strain's doubling time was 124 minutes, while the YMR090W knock-out strain's doubling time was 208 minutes.

image002.png


Ultraviolet Sensitivity

300 px BY4735(wild) uv light.jpg

YPL068C is more sensitive than YMR090W given that there is less colonizes present when under the same stress.


References

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  1. Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 SGD PMID 12140549
  2. Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91 SGD PMID 14562095
  3. Santos PM, et al. (2009) Insights into yeast adaptive response to the agricultural fungicide mancozeb: a toxicoproteomics approach. Proteomics 9(3):657-70 SGD PMID 19137554
  4. Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J Biol Chem 278(5):3265-74 SGD PMID 12414795
  5. submitted by Viktor Boer on 2003-07-25

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