Difference between revisions of "YGR058W"

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{|{{Prettytable}} align = 'right' width = '200px'
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YGR058W YGR058W]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000003290 YGR058W]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||'' ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''PEF1 ''
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''          ||'' ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''          ||'' ''
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''          || ORF, Uncharacterized[[Category:ORF]][[Category:ORF, Uncharacterized]]
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''          || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr VII:606140..607147
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|nowrap| Chr VII:606136..607143
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000003290
 
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'''Description of {{PAGENAME}}:''' Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus<ref name='S000074185'>Huh WK, et al. (2003) Global analysis of protein localization in budding yeast. Nature 425(6959):686-91
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'''Description of YGR058W:''' Penta-EF-hand protein required for polar bud growth and cell wall abscission; binds calcium and zinc with different affinity; localizes to bud site in G1, bud neck in G2; binds to Sec31p and modulates COPII coat assembly<ref name='S000123507'>Vernarecci S, et al. (2007) The yeast penta-EF protein Pef1p is involved in cation-dependent budding and cell polarization. Mol Microbiol 65(4):1122-38 {{SGDpaper|S000123507}} PMID 17640275</ref><ref name='S000150241'>Yoshibori M, et al. (2012) Involvement of the Penta-EF-Hand Protein Pef1p in the Ca(2+)-Dependent Regulation of COPII Subunit Assembly in Saccharomyces cerevisiae. PLoS One 7(7):e40765
  {{SGDpaper|S000074185}} PMID 14562095</ref>
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  {{SGDpaper|S000150241}} PMID 22792405</ref>
 
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==Community Commentary==
 
==Community Commentary==
 
{{CommentaryHelp}}
 
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<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
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<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
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J Biol Chem 278(5):3265-74</ref>
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<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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<!--
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Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
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<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
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J Biol Chem 278(5):3265-74</ref>
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-->
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Latest revision as of 14:05, 16 August 2012

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Systematic name YGR058W
Gene name PEF1
Aliases
Feature type ORF, Verified
Coordinates Chr VII:606136..607143
Primary SGDID S000003290


Description of YGR058W: Penta-EF-hand protein required for polar bud growth and cell wall abscission; binds calcium and zinc with different affinity; localizes to bud site in G1, bud neck in G2; binds to Sec31p and modulates COPII coat assembly[1][2]




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Community Commentary

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References

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  1. Vernarecci S, et al. (2007) The yeast penta-EF protein Pef1p is involved in cation-dependent budding and cell polarization. Mol Microbiol 65(4):1122-38 SGD PMID 17640275
  2. Yoshibori M, et al. (2012) Involvement of the Penta-EF-Hand Protein Pef1p in the Ca(2+)-Dependent Regulation of COPII Subunit Assembly in Saccharomyces cerevisiae. PLoS One 7(7):e40765 SGD PMID 22792405

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