Difference between revisions of "YFL001W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000001895 YFL001W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''DEG1 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''DEG1 '' | ||
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||''PUS3'' | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||''HRM3, PUS3'' |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]] | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]] | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr VI: | + | |nowrap| Chr VI:147131..148459 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000001895 |
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| − | '''Description of | + | '''Description of YFL001W:''' tRNA:pseudouridine synthase, introduces pseudouridines at position 38 or 39 in tRNA, important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm; non-essential for viability<ref name='S000053112'>Carbone ML, et al. (1991) A gene tightly linked to CEN6 is important for growth of Saccharomyces cerevisiae. Curr Genet 19(1):1-8 {{SGDpaper|S000053112}} PMID 2036682</ref><ref name='S000053287'>Lecointe F, et al. (1998) Characterization of yeast protein Deg1 as pseudouridine synthase (Pus3) catalyzing the formation of psi 38 and psi 39 in tRNA anticodon loop. J Biol Chem 273(3):1316-23 {{SGDpaper|S000053287}} PMID 9430663</ref><ref name='S000071367'>Lecointe F, et al. (2002) Lack of pseudouridine 38/39 in the anticodon arm of yeast cytoplasmic tRNA decreases in vivo recoding efficiency. J Biol Chem 277(34):30445-53 |
| − | {{SGDpaper| | + | {{SGDpaper|S000071367}} PMID 12058040</ref> |
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==Community Commentary== | ==Community Commentary== | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YFL001W |
| Gene name | DEG1 |
| Aliases | HRM3, PUS3 |
| Feature type | ORF, Verified |
| Coordinates | Chr VI:147131..148459 |
| Primary SGDID | S000001895 |
Description of YFL001W: tRNA:pseudouridine synthase, introduces pseudouridines at position 38 or 39 in tRNA, important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm; non-essential for viability[1][2][3]
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Contents
Community Commentary
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References
See Help:References on how to add references
- ↑ Carbone ML, et al. (1991) A gene tightly linked to CEN6 is important for growth of Saccharomyces cerevisiae. Curr Genet 19(1):1-8 SGD PMID 2036682
- ↑ Lecointe F, et al. (1998) Characterization of yeast protein Deg1 as pseudouridine synthase (Pus3) catalyzing the formation of psi 38 and psi 39 in tRNA anticodon loop. J Biol Chem 273(3):1316-23 SGD PMID 9430663
- ↑ Lecointe F, et al. (2002) Lack of pseudouridine 38/39 in the anticodon arm of yeast cytoplasmic tRNA decreases in vivo recoding efficiency. J Biol Chem 277(34):30445-53 SGD PMID 12058040
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