Difference between revisions of "YDR293C"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000002701 YDR293C]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000002701 YDR293C]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''SSD1 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''SSD1 ''

Latest revision as of 07:45, 23 January 2012

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Systematic name YDR293C
Gene name SSD1
Aliases CLA1, MCS1, RLT1, SRK1
Feature type ORF, Verified
Coordinates Chr IV:1049392..1045640
Primary SGDID S000002701


Description of YDR293C: Translational repressor with a role in polar growth and wall integrity; regulated by Cbk1p phosphorylation to effect bud-specific translational control and localization of specific mRNAs; interacts with TOR pathway components; contains a functional N-terminal nuclear localization sequence and nucleocytoplasmic shuttling appears to be critical to Ssd1p function[1][2][3][4][5][6]




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Community Commentary

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Strain W303 has ssd1-d2 allele[7] in which the 2094th nucleotide C is substituted with G, resulting in a premature stop codon[8], whereas S288C and BY4741 strains have dominant SSD1-V[9], which encodes a full-length Ssd1 protein. --S.hiraga 16:19, 29 April 2010 (UTC)




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References

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  1. Jansen JM, et al. (2009) Cbk1 regulation of the RNA-binding protein Ssd1 integrates cell fate with translational control. Curr Biol 19(24):2114-20 SGD PMID 19962308
  2. Kaeberlein M and Guarente L (2002) Saccharomyces cerevisiae MPT5 and SSD1 function in parallel pathways to promote cell wall integrity. Genetics 160(1):83-95 SGD PMID 11805047
  3. Kurischko C, et al. (2011) Nucleocytoplasmic shuttling of Ssd1 defines the destiny of its bound mRNAs.LID - 10.1111/j.1365-2958.2011.07731.x [doi] Mol Microbiol () SGD PMID 21762218
  4. Kurischko C, et al. (2011) The yeast Cbk1 kinase regulates mRNA localization via the mRNA-binding protein Ssd1. J Cell Biol 192(4):583-98 SGD PMID 21339329
  5. Ohyama Y, et al. (2010) Saccharomyces cerevisiae Ssd1p promotes CLN2 expression by binding to the 5'-untranslated region of CLN2 mRNA. Genes Cells 15(12):1169-88 SGD PMID 20977549
  6. Reinke A, et al. (2004) TOR complex 1 includes a novel component, Tco89p (YPL180w), and cooperates with Ssd1p to maintain cellular integrity in Saccharomyces cerevisiae. J Biol Chem 279(15):14752-62 SGD PMID 14736892
  7. Sutton et al. (1991) The SIT4 protein phosphatase functions in late G1 for progression into S phase. Mol Cell Biol 11(4):2133-48
  8. Jorgensen et al. (2002) High-Resolution Genetic Mapping With Ordered Arrays of Saccharomyces cerevisiae Deletion Mutants. Genetics 162(3):1091-9
  9. Sutton et al. (1991) The SIT4 protein phosphatase functions in late G1 for progression into S phase. Mol Cell Biol 11(4):2133-48

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References

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See Help:Categories on how to add the wiki page for this gene to a Category </protect>