Difference between revisions of "YDR228C"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000002636 YDR228C] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''PCF11 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''PCF11 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr IV: | + | |nowrap| Chr IV:923806..921926 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000002636 |
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| − | '''Description of | + | '''Description of YDR228C:''' mRNA 3' end processing factor, essential component of cleavage and polyadenylation factor IA (CF IA), involved in pre-mRNA 3' end processing and in transcription termination; binds C-terminal domain of largest subunit of RNA pol II (Rpo21p); required for gene looping<ref name='S000058038'>Amrani N, et al. (1997) PCF11 encodes a third protein component of yeast cleavage and polyadenylation factor I. Mol Cell Biol 17(3):1102-9 {{SGDpaper|S000058038}} PMID 9032237</ref><ref name='S000059527'>Barilla D, et al. (2001) Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 98(2):445-50 {{SGDpaper|S000059527}} PMID 11149954</ref><ref name='S000049768'>Birse CE, et al. (1998) Coupling termination of transcription to messenger RNA maturation in yeast. Science 280(5361):298-301 {{SGDpaper|S000049768}} PMID 9535662</ref><ref name='S000146442'>Medler S, et al. (2011) Evidence for a complex of TFIIB with poly(A) polymerase and cleavage factor 1 subunits required for gene looping. J Biol Chem () {{SGDpaper|S000146442}} PMID 21835917</ref><ref name='S000073340'>Sadowski M, et al. (2003) Independent functions of yeast Pcf11p in pre-mRNA 3' end processing and in transcription termination. EMBO J 22(9):2167-77 {{SGDpaper|S000073340}} PMID 12727883</ref><ref name='S000059665'>de Vries H, et al. (2000) Human pre-mRNA cleavage factor II(m) contains homologs of yeast proteins and bridges two other cleavage factors. EMBO J 19(21):5895-904 |
| − | {{SGDpaper| | + | {{SGDpaper|S000059665}} PMID 11060040</ref> |
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==Community Commentary== | ==Community Commentary== | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YDR228C |
| Gene name | PCF11 |
| Aliases | |
| Feature type | ORF, Verified |
| Coordinates | Chr IV:923806..921926 |
| Primary SGDID | S000002636 |
Description of YDR228C: mRNA 3' end processing factor, essential component of cleavage and polyadenylation factor IA (CF IA), involved in pre-mRNA 3' end processing and in transcription termination; binds C-terminal domain of largest subunit of RNA pol II (Rpo21p); required for gene looping[1][2][3][4][5][6]
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Contents
Community Commentary
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References
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- ↑ Amrani N, et al. (1997) PCF11 encodes a third protein component of yeast cleavage and polyadenylation factor I. Mol Cell Biol 17(3):1102-9 SGD PMID 9032237
- ↑ Barilla D, et al. (2001) Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 98(2):445-50 SGD PMID 11149954
- ↑ Birse CE, et al. (1998) Coupling termination of transcription to messenger RNA maturation in yeast. Science 280(5361):298-301 SGD PMID 9535662
- ↑ Medler S, et al. (2011) Evidence for a complex of TFIIB with poly(A) polymerase and cleavage factor 1 subunits required for gene looping. J Biol Chem () SGD PMID 21835917
- ↑ Sadowski M, et al. (2003) Independent functions of yeast Pcf11p in pre-mRNA 3' end processing and in transcription termination. EMBO J 22(9):2167-77 SGD PMID 12727883
- ↑ de Vries H, et al. (2000) Human pre-mRNA cleavage factor II(m) contains homologs of yeast proteins and bridges two other cleavage factors. EMBO J 19(21):5895-904 SGD PMID 11060040
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