Difference between revisions of "YCR063W"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YCR063W YCR063W]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000000659 YCR063W]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''BUD31 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''BUD31 ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr III:228314..228787
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|nowrap| Chr III:228318..228791
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000000659
 
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'''Description of {{PAGENAME}}:''' Protein involved in bud-site selection; analysis of integrated high-throughput datasets predicts an involvement in RNA splicing; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern<ref name='S000080161'>Troyanskaya OG, et al. (2003) A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae). Proc Natl Acad Sci U S A 100(14):8348-53 {{SGDpaper|S000080161}} PMID 12826619</ref><ref name='S000061390'>Ni L and Snyder M (2001) A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Mol Biol Cell 12(7):2147-70
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'''Description of YCR063W:''' Component of the SF3b subcomplex of the U2 snRNP; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; facilitates passage through G1/S Start, but is not required for G2/M transition or exit from mitosis<ref name='S000061390'>Ni L and Snyder M (2001) A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Mol Biol Cell 12(7):2147-70 {{SGDpaper|S000061390}} PMID 11452010</ref><ref name='S000150254'>Saha D, et al. (2012) Context dependent splicing functions of Bud31/Ycr063w define its role in budding and cell cycle progression. Biochem Biophys Res Commun () {{SGDpaper|S000150254}} PMID 22789856</ref><ref name='S000080161'>Troyanskaya OG, et al. (2003) A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae). Proc Natl Acad Sci U S A 100(14):8348-53 {{SGDpaper|S000080161}} PMID 12826619</ref><ref name='S000113686'>Wang Q, et al. (2005) Interactions of the yeast SF3b splicing factor. Mol Cell Biol 25(24):10745-54
  {{SGDpaper|S000061390}} PMID 11452010</ref>
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  {{SGDpaper|S000113686}} PMID 16314500</ref>
 
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==Community Commentary==
 
==Community Commentary==
 
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<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
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Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
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<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
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J Biol Chem 278(5):3265-74</ref>
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Latest revision as of 14:05, 7 August 2012

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Systematic name YCR063W
Gene name BUD31
Aliases CWC14
Feature type ORF, Verified
Coordinates Chr III:228318..228791
Primary SGDID S000000659


Description of YCR063W: Component of the SF3b subcomplex of the U2 snRNP; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; facilitates passage through G1/S Start, but is not required for G2/M transition or exit from mitosis[1][2][3][4]




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References

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  1. Ni L and Snyder M (2001) A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Mol Biol Cell 12(7):2147-70 SGD PMID 11452010
  2. Saha D, et al. (2012) Context dependent splicing functions of Bud31/Ycr063w define its role in budding and cell cycle progression. Biochem Biophys Res Commun () SGD PMID 22789856
  3. Troyanskaya OG, et al. (2003) A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae). Proc Natl Acad Sci U S A 100(14):8348-53 SGD PMID 12826619
  4. Wang Q, et al. (2005) Interactions of the yeast SF3b splicing factor. Mol Cell Biol 25(24):10745-54 SGD PMID 16314500

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