Difference between revisions of "YBR025C"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YBR025C YBR025C]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000000229 YBR025C]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||'' ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''OLA1 ''
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''          ||'' ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''          ||'' ''
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''          || ORF, Uncharacterized[[Category:ORF]][[Category:ORF, Uncharacterized]]
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''          || ORF, Verified[[Category:ORF]][[Category:ORF, Verified]]
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|nowrap| Chr II:291865..290681
 
|nowrap| Chr II:291865..290681
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000000229
 
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'''Description of {{PAGENAME}}:''' Hypothetical protein
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'''Description of YBR025C:''' P-loop ATPase with similarity to human OLA1 and bacterial YchF; identified as specifically interacting with the proteasome; protein abundance increases in response to hydrogen peroxide and to DNA replication stress<ref name='S000058363'>Godon C, et al. (1998) The H2O2 stimulon in Saccharomyces cerevisiae. J Biol Chem 273(35):22480-9 {{SGDpaper|S000058363}} PMID 9712873</ref><ref name='S000113730'>Guerrero C, et al. (2006) An integrated mass spectrometry-based proteomic approach: quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasome-interacting network. Mol Cell Proteomics 5(2):366-78 {{SGDpaper|S000113730}} PMID 16284124</ref><ref name='S000122199'>Koller-Eichhorn R, et al. (2007) Human OLA1 Defines an ATPase Subfamily in the Obg Family of GTP-binding Proteins. J Biol Chem 282(27):19928-37 {{SGDpaper|S000122199}} PMID 17430889</ref><ref name='S000150401'>Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress.LID - 10.1038/ncb2549 [doi] Nat Cell Biol ()
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{{SGDpaper|S000150401}} PMID 22842922</ref>
 
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=== Protein Details ===
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[[Category:Topic:Protein Details]]
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==== Protein Localization ====
 
[[Category:Topic:Protein Details:Protein Localization]]
 
 
 
Protein identified in a purified mitochondrial extract. <ref name='S000074509'>Ohlmeier S, et al. (2004) The yeast mitochondrial proteome, a study of fermentative and respiratory growth. J Biol Chem 279(6):3956-79 {{SGDpaper|S000074509}} PMID 14597615</ref> <ref name = 'CAset9949-2004-04-08'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9949 Steffen Ohlmeier] on 2004-04-08</ref>
 
 
 
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==Community Commentary==
 
==Community Commentary==
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Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
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<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
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J Biol Chem 278(5):3265-74</ref>
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==References==
 
==References==
 
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Latest revision as of 14:05, 22 October 2012

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Systematic name YBR025C
Gene name OLA1
Aliases
Feature type ORF, Verified
Coordinates Chr II:291865..290681
Primary SGDID S000000229


Description of YBR025C: P-loop ATPase with similarity to human OLA1 and bacterial YchF; identified as specifically interacting with the proteasome; protein abundance increases in response to hydrogen peroxide and to DNA replication stress[1][2][3][4]




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Community Commentary

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Protein Details

Protein Localization

Protein identified in a purified mitochondrial extract. [5] [6]





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References

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  1. Godon C, et al. (1998) The H2O2 stimulon in Saccharomyces cerevisiae. J Biol Chem 273(35):22480-9 SGD PMID 9712873
  2. Guerrero C, et al. (2006) An integrated mass spectrometry-based proteomic approach: quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasome-interacting network. Mol Cell Proteomics 5(2):366-78 SGD PMID 16284124
  3. Koller-Eichhorn R, et al. (2007) Human OLA1 Defines an ATPase Subfamily in the Obg Family of GTP-binding Proteins. J Biol Chem 282(27):19928-37 SGD PMID 17430889
  4. Tkach JM, et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress.LID - 10.1038/ncb2549 [doi] Nat Cell Biol () SGD PMID 22842922
  5. Ohlmeier S, et al. (2004) The yeast mitochondrial proteome, a study of fermentative and respiratory growth. J Biol Chem 279(6):3956-79 SGD PMID 14597615
  6. submitted by Steffen Ohlmeier on 2004-04-08

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