Difference between revisions of "Software"

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(Created page with '*MochiView Desktop genome browsing and motif analysis software (with easy import of S. cerevisiae genome/genes/motif libraries)')
 
 
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*[[MochiView]] Desktop genome browsing and motif analysis software (with easy import of S. cerevisiae genome/genes/motif libraries)
 
*[[MochiView]] Desktop genome browsing and motif analysis software (with easy import of S. cerevisiae genome/genes/motif libraries)
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*[[EGAN]] Downstream/pathway/gene set enrichment/visualization tool for exploring results of -omics experiments
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*[[REVIGO]] A Web server that summarizes and visualizes long lists of Gene Ontology terms
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*[[Primers-4-Yeast]] Design primers for gene targeting of PCR-based transformation cassettes into S. cerevisiae, and for validation of correct insertion.
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*[[MyLabStocks]] Manage molecular biology stocks of your lab (primers, strains, plasmids and more...)
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*[[GRSandPRIMED|GRS]]: Retrieve custom sequences from any annotated genome
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*[[Yeastriction]] A web based tool to select targets for CRISPR editing of the genome.
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*[[Genome Compiler]]  is a free all-in-one software platform for DNA design and visualization, data management, lab collaboration and seamless DNA ordering.
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*[[YeaZ]] is a Python-based graphical user interface and web application that applies a convolutional neural network, based on a training set, to aid in the visualization of yeast images by segmentation.
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*[https://github.com/irahorecka/sgd-rest sgd-rest] is a Python-based wrapper for the SGD REST API.

Latest revision as of 11:12, 31 July 2023

  • MochiView Desktop genome browsing and motif analysis software (with easy import of S. cerevisiae genome/genes/motif libraries)
  • EGAN Downstream/pathway/gene set enrichment/visualization tool for exploring results of -omics experiments
  • REVIGO A Web server that summarizes and visualizes long lists of Gene Ontology terms
  • Primers-4-Yeast Design primers for gene targeting of PCR-based transformation cassettes into S. cerevisiae, and for validation of correct insertion.
  • MyLabStocks Manage molecular biology stocks of your lab (primers, strains, plasmids and more...)
  • GRS: Retrieve custom sequences from any annotated genome
  • Yeastriction A web based tool to select targets for CRISPR editing of the genome.
  • Genome Compiler is a free all-in-one software platform for DNA design and visualization, data management, lab collaboration and seamless DNA ordering.
  • YeaZ is a Python-based graphical user interface and web application that applies a convolutional neural network, based on a training set, to aid in the visualization of yeast images by segmentation.
  • sgd-rest is a Python-based wrapper for the SGD REST API.