Difference between revisions of "Chromosome XVI History"

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(Created page with "This page lists all sequence and annotation changes that have been made to the Chromosome XVI systematic reference sequence since its intial release on 1996-07-31. <br> *The s...")
 
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{| border="1" style="border-collapse:collapse; width:90%" cellpadding="6"
 
{| border="1" style="border-collapse:collapse; width:90%" cellpadding="6"
 
! Date  !! Affected Features !! Start Coordinate of Change !! End Coordinate of Change !! Type of Change !! Old Sequence !! New Sequence
 
! Date  !! Affected Features !! Start Coordinate of Change !! End Coordinate of Change !! Type of Change !! Old Sequence !! New Sequence
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| rowspan="2"| 2011-02-03
 +
| rowspan="2"|[https://www.yeastgenome.org/locus/YPL224C YPL224C]
 +
| 128039
 +
| 128039
 +
| Substitution
 +
| T
 +
| G
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 126768
 +
| 126768
 +
| Insertion
 +
|
 +
| C
 +
|-
 +
| || colspan="6" | Two nucleotide changes were made within the ORF MMT2/YPL224C, altering its coding sequence: one single nucleotide substitution near the 5' end, and one single nucleotide insertion near the 3' end. The start and majority of the reading frame remain the same, but the C-terminus has changed, and the annotated protein is now 35 amino acids longer.
 +
<pre>New 126721 ACCTTTAGAGTCAGAGGTTACATCAACAAACTCGACGTCCACCTTCCCCACGTTTGGCAC  126780
 +
          |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
 +
Old 126721 ACCTTTAGAGTCAGAGGTTACATCAACAAACTCGACGTCCACCTTCCC-ACGTTTGGCAC  126779
 +
 +
New 127981 CAGGCTTGATGTTCTTATGGCCCTCCCGGCAGCATGGTAACTAGTGTTGTTATAACCTGGCACAAAGGAA  128050
 +
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
 +
Old 127980 CAGGCTTGATGTTCTTATGGCCCTCCCGGCAGCATGGTAACTAGTGTTGTTATAACCTGTCACAAAGGAA  128049</pre>
 +
'''Engel SR, et al.''' (2014) The Reference Genome Sequence of ''Saccharomyces cerevisiae'': Then and Now. G3 (Bethesda) Mar 20;4(3):389-98. <br>
 +
[http://www.yeastgenome.org/reference/24374639/overview SGD paper] | [https://www.ncbi.nlm.nih.gov/pubmed/24374639 PubMed] | [http://g3journal.org/content/4/3/389 Full-Text]
 +
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| rowspan="2"| 2011-02-03
 +
| rowspan="2"|[https://www.yeastgenome.org/locus/YPR035W YPR035W]
 +
| 642955
 +
| 642955
 +
| Substitution
 +
| G
 +
| A
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 642995
 +
| 642995
 +
| Substitution
 +
| C
 +
| T
 +
|-
 +
| || colspan="6" | Nucleotide change(s) in the coding region of GLN1/YPR035W resulted in an altered protein sequence. The start, stop, and reading frame remain the same, but protein residue 251 is now Threonine rather than Alanine, and residue 264 is now Methionine rather than Threonine.
 +
<pre>New  642949 GGTTGTCACACTAACGTTTCCACCAAGGAAATGAGACAACCAGGTGGTATGAAATACATCGAACAAGCCA 643018
 +
            ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
 +
Old  642946 GGTTGTCACGCTAACGTTTCCACCAAGGAAATGAGACAACCAGGTGGTACGAAATACATCGAACAAGCCA 643015</pre>
 +
'''Engel SR, et al.''' (2014) The Reference Genome Sequence of ''Saccharomyces cerevisiae'': Then and Now. G3 (Bethesda) Mar 20;4(3):389-98. <br>
 +
[http://www.yeastgenome.org/reference/24374639/overview SGD paper] | [https://www.ncbi.nlm.nih.gov/pubmed/24374639 PubMed] | [http://g3journal.org/content/4/3/389 Full-Text]
 +
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 2011-02-03
 +
| [https://www.yeastgenome.org/locus/YPR097W YPR097W]
 +
| 727933
 +
| 727933
 +
| Substitution
 +
| G
 +
| A
 +
|-
 +
| || colspan="6" | A single nucleotide substitution within the coding region of YPR097W resulted in an altered protein sequence. The start, stop, and reading frame remain the same, but protein residue 848 is now Serine rather than Glycine.
 +
<pre>New    727918  ATTTTGAGAAGTTCATGAGTGATTTGATCAGGCTTGTTGATGATGTTATCAATGGTCAGT  727977
 +
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
 +
Old    727916  ATTTTGAGAAGTTCATGGGTGATTTGATCAGGCTTGTTGATGATGTTATCAATGGTCAGT  727975</pre>
 +
'''Engel SR, et al.''' (2014) The Reference Genome Sequence of ''Saccharomyces cerevisiae'': Then and Now. G3 (Bethesda) Mar 20;4(3):389-98. <br>
 +
[http://www.yeastgenome.org/reference/24374639/overview SGD paper] | [https://www.ncbi.nlm.nih.gov/pubmed/24374639 PubMed] | [http://g3journal.org/content/4/3/389 Full-Text]
 +
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 2011-02-03
 +
| [https://www.yeastgenome.org/locus/YPR121W YPR121W]
 +
| 778863
 +
| 778863
 +
| Substitution
 +
| T
 +
| A
 +
|-
 +
| || colspan="6" | A single nucleotide substitution within the coding region of THI22/YPR121W resulted in an altered protein sequence. The start, stop, and reading frame remain the same, but protein residue 95 is now Glutamine rather than Histidine.
 +
<pre>New    778858  CGGCGCTCAAAATATACCAAAGAAAATGGTATCTCAAATATTAGACGCCAATTTACAGGA  778917
 +
              ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
 +
Old    778854  CGGCGCTCATAATATACCAAAGAAAATGGTATCTCAAATATTAGACGCCAATTTACAGGA  778913</pre>
 +
'''Engel SR, et al.''' (2014) The Reference Genome Sequence of ''Saccharomyces cerevisiae'': Then and Now. G3 (Bethesda) Mar 20;4(3):389-98. <br>
 +
[http://www.yeastgenome.org/reference/24374639/overview SGD paper] | [https://www.ncbi.nlm.nih.gov/pubmed/24374639 PubMed] | [http://g3journal.org/content/4/3/389 Full-Text]
 +
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| rowspan="2"| 2011-02-03
 +
| rowspan="2"|[https://www.yeastgenome.org/locus/YPL108W YPL108W], [https://www.yeastgenome.org/locus/YPL109C YPL109C]
 +
| 347528
 +
| 347528
 +
| Insertion
 +
|
 +
| G
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 347759
 +
| 347759
 +
| Insertion
 +
|
 +
| C
 +
|-
 +
| || colspan="6" | Two separate single nucleotides were inserted in the intergenic region between ORFs YPL109C and YPL108W.
 +
<pre>New    347521  GGTATTATTGCCCCTCATATATTCGGGGTTATTTATTTTTCGTTGCTTGAAGTAAAGCCT  347580
 +
              ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
 +
Old    347520  GGTATTATT-CCCCTCATATATTCGGGGTTATTTATTTTTCGTTGCTTGAAGTAAAGCCT  347578
 +
New    347751  CCCTTTCGCGGCACTTTTTCTCTTAGCTCTGCTTGATACATCGACTGGGAACTTCTTCTCTTTGAGCCAA  347820
 +
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 +
Old    347749  CCCTTTCGCGG-ACTTTTTCTCTTAGCTCTGCTTGATACATCGACTGGGAACTTCTTCTCTTTGAGCCAA  347817</pre>
 +
'''Engel SR, et al.''' (2014) The Reference Genome Sequence of ''Saccharomyces cerevisiae'': Then and Now. G3 (Bethesda) Mar 20;4(3):389-98. <br>
 +
[http://www.yeastgenome.org/reference/24374639/overview SGD paper] | [https://www.ncbi.nlm.nih.gov/pubmed/24374639 PubMed] | [http://g3journal.org/content/4/3/389 Full-Text]
 +
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| rowspan="2"| 2011-02-03
 +
| rowspan="2"|[https://www.yeastgenome.org/locus/YPR121W YPR121W], [https://www.yeastgenome.org/locus/YPRWdelta16 YPRWdelta16]
 +
| 778376
 +
| 778376
 +
| Insertion
 +
|
 +
| C
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 778302
 +
| 778302
 +
| Insertion
 +
|
 +
| G
 +
|-
 +
| || colspan="6" | Two single nucleotide insertions were made in the intergenic region between YPRWdelta16 and YPR121W/THI22.
 +
<pre> New    778258  TTAATGGAATAACGTGATTTTTGTACCAAATTGCCTATTTCAGATTCGGCGTGCGCTTCC  778317
 +
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
 +
Old    778256  TTAATGGAATAACGTGATTTTTGTACCAAATTGCCTATTTCAGATTC-GCGTGCGCTTCC  778314
 +
New    778368  TGCACGGAAGATCCTTGCAGGAATCAAATACTGCCTTTCACTTTGCAACCTCTTAATCACATAGTAGCAC  778437
 +
              |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 +
Old    778365  TGCACGGAAGAT-CTTGCAGGAATCAAATACTGCCTTTCACTTTGCAACCTCTTAATCACATAGTAGCAC  778433</pre>
 +
'''Engel SR, et al.''' (2014) The Reference Genome Sequence of ''Saccharomyces cerevisiae'': Then and Now. G3 (Bethesda) Mar 20;4(3):389-98. <br>
 +
[http://www.yeastgenome.org/reference/24374639/overview SGD paper] | [https://www.ncbi.nlm.nih.gov/pubmed/24374639 PubMed] | [http://g3journal.org/content/4/3/389 Full-Text]
 +
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 2011-02-03
 +
| [https://www.yeastgenome.org/locus/YPR035W YPR035W], [https://www.yeastgenome.org/locus/YPR036W YPR036W]
 +
| 643579
 +
| 643579
 +
| Substitution
 +
| T
 +
| C
 +
|-
 +
| || colspan="6" | A single nucleotide substitution was made in the intergenic region between ORFs YPR035W/GLN1 and YPR036W/VMA13.
 +
<pre> New    643559  TCGAATTTTTTCTTTTTTTTTTTCTGCAAAGCGACGCTGTGTTGTATATTGCTCTAAAAT  643618
 +
              ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
 +
Old    643556  TCGAATTTTTTCTTTTTTTTTTTTTGCAAAGCGACGCTGTGTTGTATATTGCTCTAAAAT  643615</pre>
 +
'''Engel SR, et al.''' (2014) The Reference Genome Sequence of ''Saccharomyces cerevisiae'': Then and Now. G3 (Bethesda) Mar 20;4(3):389-98. <br>
 +
[http://www.yeastgenome.org/reference/24374639/overview SGD paper] | [https://www.ncbi.nlm.nih.gov/pubmed/24374639 PubMed] | [http://g3journal.org/content/4/3/389 Full-Text]
 +
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 2011-02-03
 +
| [https://www.yeastgenome.org/locus/YPL016W YPL016W]
 +
| 523639
 +
| 523639
 +
| Substitution
 +
| C
 +
| T
 +
|-
 +
| || colspan="6" | A single nucleotide substitution was made within the ORF SWI1/YPL016W. Note that the protein sequence was not changed.
 +
<pre>New    523619  GATTCCTCCCTAACCAATTTCCTTTGAAAATTCACAGAACTCCTTATTTGACTTCTTTGA  523678
 +
              ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
 +
Old    523616  GATTCCTCCCTAACCAATTTCCTCTGAAAATTCACAGAACTCCTTATTTGACTTCTTTGA  523675</pre>
 +
'''Engel SR, et al.''' (2014) The Reference Genome Sequence of ''Saccharomyces cerevisiae'': Then and Now. G3 (Bethesda) Mar 20;4(3):389-98. <br>
 +
[http://www.yeastgenome.org/reference/24374639/overview SGD paper] | [https://www.ncbi.nlm.nih.gov/pubmed/24374639 PubMed] | [http://g3journal.org/content/4/3/389 Full-Text]
 +
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| rowspan="4"| 2011-02-03
 +
| rowspan="4"| [https://www.yeastgenome.org/locus/YPL016W YPL016W], [https://www.yeastgenome.org/locus/YPL017C YPL017C]
 +
| 520375
 +
| 520375
 +
| Insertion
 +
|
 +
| C
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 520378
 +
| 520378
 +
| Substitution
 +
| C
 +
| G
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 520646
 +
| 520646
 +
| Insertion
 +
|
 +
| C
 +
|- style="height:30px; width:30px; text-align:center;"
 +
| 520818
 +
| 520818
 +
| Deletion
 +
| T
 +
|
 +
|-
 +
| || colspan="6" | Four single nucleotide changes were made in the intergenic region between ORFs YPL016W/SWI1 and YPL017C/IRC15: two insertions, one substitution, and one deletion.
 +
<pre>New    520320  AGATGCATGCCTGCAGGTCTGGGTGTACCCCCTGCCTGAGTGTTCCACCCAGGCCTCGCCGGAGGAAAAT  520389
 +
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
 +
Old    520318  AGATGCATGCCTGCAGGTCTGGGTGTACCCCCTGCCTGAGTGTTCCACCCAGGCCTCG-CGCAGGAAAAT  520386
 +
New    520620  CATATTCACATTGCGTTTTAGTCATAACCACCTTCCGGTATTCATCATTCGTATTGAATA  520679
 +
              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
 +
Old    520617  CATATTCACATTGCGTTTTAGTCATAACCA-CTTCCGGTATTCATCATTCGTATTGAATA  520675
 +
New    520800  ATCTCTGCTTTGGCATTTCGCG-TTGTTTCCTCTCACGGATTGCAGATTATTGTTCACCA  520858
 +
              |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
 +
Old    520796  ATCTCTGCTTTGGCATTTCGCGTTTGTTTCCTCTCACGGATTGCAGATTATTGTTCACCA  520855</pre>
 +
'''Engel SR, et al.''' (2014) The Reference Genome Sequence of ''Saccharomyces cerevisiae'': Then and Now. G3 (Bethesda) Mar 20;4(3):389-98. <br>
 +
[http://www.yeastgenome.org/reference/24374639/overview SGD paper] | [https://www.ncbi.nlm.nih.gov/pubmed/24374639 PubMed] | [http://g3journal.org/content/4/3/389 Full-Text]

Revision as of 14:53, 3 October 2019

This page lists all sequence and annotation changes that have been made to the Chromosome XVI systematic reference sequence since its intial release on 1996-07-31.

  • The sequence of Chromosome XVI has been updated 23 times, affecting 16 features.
  • The annotation of Chromosome XVI has been updated 39 times, affecting 72 features.
  • Current and past versions can be obtained from SGD's Download site.


Sequence Changes

Date Affected Features Start Coordinate of Change End Coordinate of Change Type of Change Old Sequence New Sequence
2011-02-03 YPL224C 128039 128039 Substitution T G
126768 126768 Insertion C
Two nucleotide changes were made within the ORF MMT2/YPL224C, altering its coding sequence: one single nucleotide substitution near the 5' end, and one single nucleotide insertion near the 3' end. The start and majority of the reading frame remain the same, but the C-terminus has changed, and the annotated protein is now 35 amino acids longer. 
New 126721 ACCTTTAGAGTCAGAGGTTACATCAACAAACTCGACGTCCACCTTCCCCACGTTTGGCAC  126780
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Old 126721 ACCTTTAGAGTCAGAGGTTACATCAACAAACTCGACGTCCACCTTCCC-ACGTTTGGCAC  126779

New 127981 CAGGCTTGATGTTCTTATGGCCCTCCCGGCAGCATGGTAACTAGTGTTGTTATAACCTGGCACAAAGGAA  128050
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Old 127980 CAGGCTTGATGTTCTTATGGCCCTCCCGGCAGCATGGTAACTAGTGTTGTTATAACCTGTCACAAAGGAA  128049

Engel SR, et al. (2014) The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now. G3 (Bethesda) Mar 20;4(3):389-98.
SGD paper | PubMed | Full-Text

2011-02-03 YPR035W 642955 642955 Substitution G A
642995 642995 Substitution C T
Nucleotide change(s) in the coding region of GLN1/YPR035W resulted in an altered protein sequence. The start, stop, and reading frame remain the same, but protein residue 251 is now Threonine rather than Alanine, and residue 264 is now Methionine rather than Threonine. 
New  642949 GGTTGTCACACTAACGTTTCCACCAAGGAAATGAGACAACCAGGTGGTATGAAATACATCGAACAAGCCA 643018
            ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Old  642946 GGTTGTCACGCTAACGTTTCCACCAAGGAAATGAGACAACCAGGTGGTACGAAATACATCGAACAAGCCA 643015

Engel SR, et al. (2014) The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now. G3 (Bethesda) Mar 20;4(3):389-98.
SGD paper | PubMed | Full-Text

2011-02-03 YPR097W 727933 727933 Substitution G A
A single nucleotide substitution within the coding region of YPR097W resulted in an altered protein sequence. The start, stop, and reading frame remain the same, but protein residue 848 is now Serine rather than Glycine. 
New    727918  ATTTTGAGAAGTTCATGAGTGATTTGATCAGGCTTGTTGATGATGTTATCAATGGTCAGT  727977
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Old    727916  ATTTTGAGAAGTTCATGGGTGATTTGATCAGGCTTGTTGATGATGTTATCAATGGTCAGT  727975

Engel SR, et al. (2014) The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now. G3 (Bethesda) Mar 20;4(3):389-98.
SGD paper | PubMed | Full-Text

2011-02-03 YPR121W 778863 778863 Substitution T A
A single nucleotide substitution within the coding region of THI22/YPR121W resulted in an altered protein sequence. The start, stop, and reading frame remain the same, but protein residue 95 is now Glutamine rather than Histidine. 
New    778858  CGGCGCTCAAAATATACCAAAGAAAATGGTATCTCAAATATTAGACGCCAATTTACAGGA  778917
               ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Old    778854  CGGCGCTCATAATATACCAAAGAAAATGGTATCTCAAATATTAGACGCCAATTTACAGGA  778913

Engel SR, et al. (2014) The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now. G3 (Bethesda) Mar 20;4(3):389-98.
SGD paper | PubMed | Full-Text

2011-02-03 YPL108W, YPL109C 347528 347528 Insertion G
347759 347759 Insertion C
Two separate single nucleotides were inserted in the intergenic region between ORFs YPL109C and YPL108W. 
New    347521  GGTATTATTGCCCCTCATATATTCGGGGTTATTTATTTTTCGTTGCTTGAAGTAAAGCCT  347580
               ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Old    347520  GGTATTATT-CCCCTCATATATTCGGGGTTATTTATTTTTCGTTGCTTGAAGTAAAGCCT  347578
New    347751  CCCTTTCGCGGCACTTTTTCTCTTAGCTCTGCTTGATACATCGACTGGGAACTTCTTCTCTTTGAGCCAA  347820
               ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Old    347749  CCCTTTCGCGG-ACTTTTTCTCTTAGCTCTGCTTGATACATCGACTGGGAACTTCTTCTCTTTGAGCCAA  347817

Engel SR, et al. (2014) The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now. G3 (Bethesda) Mar 20;4(3):389-98.
SGD paper | PubMed | Full-Text

2011-02-03 YPR121W, YPRWdelta16 778376 778376 Insertion C
778302 778302 Insertion G
Two single nucleotide insertions were made in the intergenic region between YPRWdelta16 and YPR121W/THI22. 
 New    778258  TTAATGGAATAACGTGATTTTTGTACCAAATTGCCTATTTCAGATTCGGCGTGCGCTTCC  778317
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Old    778256  TTAATGGAATAACGTGATTTTTGTACCAAATTGCCTATTTCAGATTC-GCGTGCGCTTCC  778314
New    778368  TGCACGGAAGATCCTTGCAGGAATCAAATACTGCCTTTCACTTTGCAACCTCTTAATCACATAGTAGCAC  778437
               |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Old    778365  TGCACGGAAGAT-CTTGCAGGAATCAAATACTGCCTTTCACTTTGCAACCTCTTAATCACATAGTAGCAC  778433

Engel SR, et al. (2014) The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now. G3 (Bethesda) Mar 20;4(3):389-98.
SGD paper | PubMed | Full-Text

2011-02-03 YPR035W, YPR036W 643579 643579 Substitution T C
A single nucleotide substitution was made in the intergenic region between ORFs YPR035W/GLN1 and YPR036W/VMA13. 
 New    643559  TCGAATTTTTTCTTTTTTTTTTTCTGCAAAGCGACGCTGTGTTGTATATTGCTCTAAAAT  643618
               ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Old    643556  TCGAATTTTTTCTTTTTTTTTTTTTGCAAAGCGACGCTGTGTTGTATATTGCTCTAAAAT  643615

Engel SR, et al. (2014) The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now. G3 (Bethesda) Mar 20;4(3):389-98.
SGD paper | PubMed | Full-Text

2011-02-03 YPL016W 523639 523639 Substitution C T
A single nucleotide substitution was made within the ORF SWI1/YPL016W. Note that the protein sequence was not changed. 
New    523619  GATTCCTCCCTAACCAATTTCCTTTGAAAATTCACAGAACTCCTTATTTGACTTCTTTGA  523678
               ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Old    523616  GATTCCTCCCTAACCAATTTCCTCTGAAAATTCACAGAACTCCTTATTTGACTTCTTTGA  523675

Engel SR, et al. (2014) The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now. G3 (Bethesda) Mar 20;4(3):389-98.
SGD paper | PubMed | Full-Text

2011-02-03 YPL016W, YPL017C 520375 520375 Insertion C
520378 520378 Substitution C G
520646 520646 Insertion C
520818 520818 Deletion T
Four single nucleotide changes were made in the intergenic region between ORFs YPL016W/SWI1 and YPL017C/IRC15: two insertions, one substitution, and one deletion. 
New    520320  AGATGCATGCCTGCAGGTCTGGGTGTACCCCCTGCCTGAGTGTTCCACCCAGGCCTCGCCGGAGGAAAAT  520389
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Old    520318  AGATGCATGCCTGCAGGTCTGGGTGTACCCCCTGCCTGAGTGTTCCACCCAGGCCTCG-CGCAGGAAAAT  520386
New    520620  CATATTCACATTGCGTTTTAGTCATAACCACCTTCCGGTATTCATCATTCGTATTGAATA  520679
               |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Old    520617  CATATTCACATTGCGTTTTAGTCATAACCA-CTTCCGGTATTCATCATTCGTATTGAATA  520675
New    520800  ATCTCTGCTTTGGCATTTCGCG-TTGTTTCCTCTCACGGATTGCAGATTATTGTTCACCA  520858
               |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Old    520796  ATCTCTGCTTTGGCATTTCGCGTTTGTTTCCTCTCACGGATTGCAGATTATTGTTCACCA  520855

Engel SR, et al. (2014) The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now. G3 (Bethesda) Mar 20;4(3):389-98.
SGD paper | PubMed | Full-Text

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