Difference between revisions of "YNL329C"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005273 YNL329C] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''PEX6 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''PEX6 '' | ||
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|nowrap| Chr XIV:22633..19541 | |nowrap| Chr XIV:22633..19541 | ||
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005273 |
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| − | '''Description of | + | '''Description of YNL329C:''' AAA-peroxin that heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol<ref name='S000080317'>Birschmann I, et al. (2005) Structural and functional analysis of the interaction of the AAA-peroxins Pex1p and Pex6p. FEBS J 272(1):47-58 {{SGDpaper|S000080317}} PMID 15634331</ref><ref name='S000122542'>Platta HW, et al. (2005) Functional role of the AAA peroxins in dislocation of the cycling PTS1 receptor back to the cytosol. Nat Cell Biol 7(8):817-22 {{SGDpaper|S000122542}} PMID 16007078</ref><ref name='S000054025'>Voorn-Brouwer T, et al. (1993) Sequence of the PAS8 gene, the product of which is essential for biogenesis of peroxisomes in Saccharomyces cerevisiae. Biochim Biophys Acta 1216(2):325-8 |
{{SGDpaper|S000054025}} PMID 8241279</ref> | {{SGDpaper|S000054025}} PMID 8241279</ref> | ||
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==Community Commentary== | ==Community Commentary== | ||
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| + | === Protein Details === | ||
| + | [[Category:Topic:Protein Details]] | ||
| + | ==== Other Protein Details ==== | ||
| + | [[Category:Topic:Protein Details:Other Protein Details]] | ||
| + | '''Other Topic''': Homology [[Category:Topic:Homology]] | ||
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| + | Homology was found, at the sequence and domain-composition level, between several components of the Peroxisomal protein import machinery and components of the Endoplasmic Reticulum Associated Decay (ERAD) pathway. This suggests a common evolutionary origin for both systems and a similar mechanism of action. The homology relationships can be stablished between Pex1,Pex6 and cdc48; Pex2 and Hrd1; Pex4 and Ubc1; and Pex5 and Hrd3. <ref name='S000114809'>Gabaldon T, et al. (2006) Origin and evolution of the peroxisomal proteome. Biol Direct 1():8 {{SGDpaper|S000114809}} PMID 16556314</ref> <ref name = 'CAset11335-2006-04-12'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=11335 Toni Gabaldon] on 2006-04-12</ref> | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 06:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YNL329C |
| Gene name | PEX6 |
| Aliases | PAS8 |
| Feature type | ORF, Verified |
| Coordinates | Chr XIV:22633..19541 |
| Primary SGDID | S000005273 |
Description of YNL329C: AAA-peroxin that heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol[1][2][3]
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Community Commentary
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Protein Details
Other Protein Details
Other Topic: Homology
Homology was found, at the sequence and domain-composition level, between several components of the Peroxisomal protein import machinery and components of the Endoplasmic Reticulum Associated Decay (ERAD) pathway. This suggests a common evolutionary origin for both systems and a similar mechanism of action. The homology relationships can be stablished between Pex1,Pex6 and cdc48; Pex2 and Hrd1; Pex4 and Ubc1; and Pex5 and Hrd3. [4] [5]
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References
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- ↑ Birschmann I, et al. (2005) Structural and functional analysis of the interaction of the AAA-peroxins Pex1p and Pex6p. FEBS J 272(1):47-58 SGD PMID 15634331
- ↑ Platta HW, et al. (2005) Functional role of the AAA peroxins in dislocation of the cycling PTS1 receptor back to the cytosol. Nat Cell Biol 7(8):817-22 SGD PMID 16007078
- ↑ Voorn-Brouwer T, et al. (1993) Sequence of the PAS8 gene, the product of which is essential for biogenesis of peroxisomes in Saccharomyces cerevisiae. Biochim Biophys Acta 1216(2):325-8 SGD PMID 8241279
- ↑ Gabaldon T, et al. (2006) Origin and evolution of the peroxisomal proteome. Biol Direct 1():8 SGD PMID 16556314
- ↑ submitted by Toni Gabaldon on 2006-04-12
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