Difference between revisions of "YML046W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000004509 YML046W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''PRP39 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''PRP39 '' | ||
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|nowrap| Chr XIII:181474..183363 | |nowrap| Chr XIII:181474..183363 | ||
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000004509 |
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| − | '''Description of | + | '''Description of YML046W:''' U1 snRNP protein involved in splicing, contains multiple tetriatricopeptide repeats<ref name='S000044485'>Gottschalk A, et al. (1998) A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins. RNA 4(4):374-93 {{SGDpaper|S000044485}} PMID 9630245</ref><ref name='S000040958'>Lockhart SR and Rymond BC (1994) Commitment of yeast pre-mRNA to the splicing pathway requires a novel U1 small nuclear ribonucleoprotein polypeptide, Prp39p. Mol Cell Biol 14(6):3623-33 {{SGDpaper|S000040958}} PMID 8196608</ref><ref name='S000064189'>Zhang D and Rosbash M (1999) Identification of eight proteins that cross-link to pre-mRNA in the yeast commitment complex. Genes Dev 13(5):581-92 |
| − | {{SGDpaper| | + | {{SGDpaper|S000064189}} PMID 10072386</ref> |
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==Community Commentary== | ==Community Commentary== | ||
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| + | === Interactions === | ||
| + | [[Category:Topic:Interactions]] | ||
| + | ==== Two Hybrid ==== | ||
| + | [[Category:Topic:Interactions:Two Hybrid]] | ||
| + | Two Hybrid interaction with Prp8 [[Category:Two Hybrid Interactions with Prp8]]<br> | ||
| + | N-terminal region of Prp8 interacts with Prp39 <ref name='S000060204'>van Nues RW and Beggs JD (2001) Functional contacts with a range of splicing proteins suggest a central role for Brr2p in the dynamic control of the order of events in spliceosomes of Saccharomyces cerevisiae. Genetics 157(4):1451-67 {{SGDpaper|S000060204}} PMID 11290703</ref> <ref name = 'CAset9267-2003-04-11'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9267 Richard Grainger] on 2003-04-11</ref> | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 06:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YML046W |
| Gene name | PRP39 |
| Aliases | |
| Feature type | ORF, Verified |
| Coordinates | Chr XIII:181474..183363 |
| Primary SGDID | S000004509 |
Description of YML046W: U1 snRNP protein involved in splicing, contains multiple tetriatricopeptide repeats[1][2][3]
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Community Commentary
About Community Commentary. Please share your knowledge!
Interactions
Two Hybrid
Two Hybrid interaction with Prp8
N-terminal region of Prp8 interacts with Prp39 [4] [5]
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References
See Help:References on how to add references
- ↑ Gottschalk A, et al. (1998) A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins. RNA 4(4):374-93 SGD PMID 9630245
- ↑ Lockhart SR and Rymond BC (1994) Commitment of yeast pre-mRNA to the splicing pathway requires a novel U1 small nuclear ribonucleoprotein polypeptide, Prp39p. Mol Cell Biol 14(6):3623-33 SGD PMID 8196608
- ↑ Zhang D and Rosbash M (1999) Identification of eight proteins that cross-link to pre-mRNA in the yeast commitment complex. Genes Dev 13(5):581-92 SGD PMID 10072386
- ↑ van Nues RW and Beggs JD (2001) Functional contacts with a range of splicing proteins suggest a central role for Brr2p in the dynamic control of the order of events in spliceosomes of Saccharomyces cerevisiae. Genetics 157(4):1451-67 SGD PMID 11290703
- ↑ submitted by Richard Grainger on 2003-04-11
See Help:Categories on how to add the wiki page for this gene to a Category </protect>
