Difference between revisions of "snR78"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000007312 snR78] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SNR78 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SNR78 '' | ||
|- | |- | ||
| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||'' '' | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases''' ||''Z8'' |
|- | |- | ||
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || snoRNA[[Category:snoRNA]] | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type''' || snoRNA[[Category:snoRNA]] | ||
|- | |- | ||
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XIII: | + | |nowrap| Chr XIII:297278..297364 |
|- | |- | ||
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000007312 | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000007312 | ||
|} | |} | ||
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| − | '''Description of snR78:''' C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of large subunit (LSU) rRNA at position U2421<ref name=' | + | '''Description of snR78:''' C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of large subunit (LSU) rRNA at position U2421<ref name='S000053492'>Lowe TM and Eddy SR (1999) A computational screen for methylation guide snoRNAs in yeast. Science 283(5405):1168-71 {{SGDpaper|S000053492}} PMID 10024243</ref><ref name='S000127575'>Lu Y, et al. (1999) A novel snoRNA gene cluster in yeast is transcribed as polycistronic pre-snoRNAs. Sci China C Life Sci 42(5):529-37 {{SGDpaper|S000127575}} PMID 18726517</ref><ref name='S000120772'>Piekna-Przybylska D, et al. (2007) New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA. RNA 13(3):305-12 {{SGDpaper|S000120772}} PMID 17283215</ref><ref name='S000041297'>Qu LH, et al. (1999) Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast. Mol Cell Biol 19(2):1144-58 {{SGDpaper|S000041297}} PMID 9891049</ref><ref name='S000058471'>Samarsky DA and Fournier MJ (1999) A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae. Nucleic Acids Res 27(1):161-4 |
| − | {{SGDpaper| | + | {{SGDpaper|S000058471}} PMID 9847166</ref> |
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| + | <!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation --> | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
| + | --> | ||
Latest revision as of 06:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | snR78 |
| Gene name | SNR78 |
| Aliases | Z8 |
| Feature type | snoRNA |
| Coordinates | Chr XIII:297278..297364 |
| Primary SGDID | S000007312 |
Description of snR78: C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of large subunit (LSU) rRNA at position U2421[1][2][3][4][5]
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Contents
Community Commentary
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References
See Help:References on how to add references
- ↑ Lowe TM and Eddy SR (1999) A computational screen for methylation guide snoRNAs in yeast. Science 283(5405):1168-71 SGD PMID 10024243
- ↑ Lu Y, et al. (1999) A novel snoRNA gene cluster in yeast is transcribed as polycistronic pre-snoRNAs. Sci China C Life Sci 42(5):529-37 SGD PMID 18726517
- ↑ Piekna-Przybylska D, et al. (2007) New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA. RNA 13(3):305-12 SGD PMID 17283215
- ↑ Qu LH, et al. (1999) Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast. Mol Cell Biol 19(2):1144-58 SGD PMID 9891049
- ↑ Samarsky DA and Fournier MJ (1999) A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae. Nucleic Acids Res 27(1):161-4 SGD PMID 9847166
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