Difference between revisions of "Details of 2021 Reference Genome Annotation Update R64.3"

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The ''S. cerevisiae'' strain S288C reference genome annotation was updated in its first major update since 2014. The new genome annotation is release R64.3.1, dated 2021-04-22.  Note that the underlying genome sequence itself was not altered in any way.
+
The ''S. cerevisiae'' strain S288C reference genome annotation was updated in its first major update since 2014. The new genome annotation is release R64.3.1, dated 2021-04-21.  Note that the underlying genome sequence itself was not altered in any way.
 +
__FORCETOC__
 +
==R64.3 Annotation update summary==
 +
This annotation update included (details in table below):
 +
*7 new ORFs: [https://www.yeastgenome.org/locus/S000303806 OTO1/YGR227C-A], [https://www.yeastgenome.org/locus/S000303807 YHR052C-B], [https://www.yeastgenome.org/locus/S000303808 YHR054C-B], [https://www.yeastgenome.org/locus/S000303810 YJR107C-A], [https://www.yeastgenome.org/locus/S000303811 YKL104W-A], [https://www.yeastgenome.org/locus/S000303812 YLR379W-A], [https://www.yeastgenome.org/locus/S000303813 YMR008C-A]
 +
*5 new ncRNAs: [https://www.yeastgenome.org/locus/S000303802 GAL10-ncRNA], [https://www.yeastgenome.org/locus/S000303803 TBRT/XUT_2F-154], [https://www.yeastgenome.org/locus/S000303809 SUT169], [https://www.yeastgenome.org/locus/S000303814 PHO84 lncRNA], [https://www.yeastgenome.org/locus/S000303815 GAL4 lncRNA]
 +
*2 new uORFs for [https://www.yeastgenome.org/locus/S000003139 ROK1/YGL171W]
 +
*1 new recombination enhancer: [https://www.yeastgenome.org/locus/S000303804 RE]
 +
*1 new LTR: [https://www.yeastgenome.org/locus/S000303805 YELWdelta27]
 +
*3 ORFs with shifted translation starts: [https://www.yeastgenome.org/locus/S000000792 HPA3/YEL066W], [https://www.yeastgenome.org/locus/S000003773 YJR012C], [https://www.yeastgenome.org/locus/S000005204 LTO1/YNL260C]
 +
*1 ORF with shifted translation stop plus new intron: [https://www.yeastgenome.org/locus/S000004755 LDO45/YMR147W]
 +
*Changed feature_type (and SO_term) for non-transcribed spacers: [https://www.yeastgenome.org/locus/S000029714 NTS1-2], [https://www.yeastgenome.org/locus/S000029329 NTS2-1], [https://www.yeastgenome.org/locus/S000029706 NTS2-2]
 +
*New systematic nomenclature system for [https://www.yeastgenome.org/search?q=YNC&category=locus entire annotated complement of ncRNAs]
  
−
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+
Various sequence and annotation files are available on SGD's [http://sgd-archive.yeastgenome.org/sequence/S288C_reference/ Downloads] site.
 +
 
 +
==R64.3 Annotation update details==
 +
{| border="1" style="border-collapse:collapse; width:90%" cellpadding="3"
 
|-
 
|-
 
! style="background: #D8D8D8" | Chr
 
! style="background: #D8D8D8" | Chr
Line 9: Line 24:
 
|-
 
|-
 
|II
 
|II
−
|YNCB0008W aka GAL10-ncRNA
+
|[https://www.yeastgenome.org/locus/S000303802 YNCB0008W] aka GAL10-ncRNA
−
|New ncRNA
+
|New ncRNA antisense to GAL10
−
|PMID:19061643, PMID:19407817, PMID:22226051
+
*coordinates 276805..280645
 +
|[https://www.yeastgenome.org/reference/S000128634 Houseley et al 2008] PMID:19061643,  
 +
[https://www.yeastgenome.org/reference/S000131425 Pinskaya et al 2009] PMID:19407817,  
 +
<br>[https://www.yeastgenome.org/reference/S000148029 Geisler et al 2012] PMID:22226051
 
|-
 
|-
 
|II
 
|II
−
|YNCB0014W aka TBRT/XUT_2F-154
+
|[https://www.yeastgenome.org/locus/S000303803 YNCB0014W] aka TBRT/XUT_2F-154
−
|New ncRNA
+
|New ncRNA antisense to TAT1
−
|PMID:32081726
+
*coordinates 376610..378633
 +
|[https://www.yeastgenome.org/reference/S000250512 Awasthi et al 2020] PMID:32081726
 
|-
 
|-
 
|III
 
|III
−
|RE/RE301
+
|[https://www.yeastgenome.org/locus/S000303804 RE/RE301]
 
|New recombination enhancer
 
|New recombination enhancer
−
|PMID:8861911
+
*coordinates 29108..29809
 +
|[https://www.yeastgenome.org/reference/S000045456 Wu and Haber 1996] PMID:8861911
 
|-
 
|-
 
|V
 
|V
−
|YELWdelta27
+
|[https://www.yeastgenome.org/locus/S000303805 YELWdelta27]
 
|New Ty1 LTR
 
|New Ty1 LTR
−
|PMID:29320491  
+
*coordinates 449274..449626
 +
|[https://www.yeastgenome.org/reference/S000249429 Nene et al 2018] PMID:29320491  
 
|-
 
|-
 
|V
 
|V
−
|HPA3/YEL066W
+
|[https://www.yeastgenome.org/locus/S000000792 HPA3/YEL066W]
 
|Moved translation start to Met19
 
|Moved translation start to Met19
−
old coordinates: 26667..27206
+
*old coordinates: 26667..27206
−
new coordinates: 26721..27206
+
*new coordinates: 26721..27206
−
|PMID: 23775086
+
|[https://www.yeastgenome.org/reference/S000154122 Sampath et al 2013] PMID:23775086
 
|-
 
|-
 
|VII
 
|VII
−
|OTO1/YGR227C-A
+
|[https://www.yeastgenome.org/locus/S000303806 OTO1/YGR227C-A]
 
|New ORF
 
|New ORF
−
|PMID: 25781884
+
*coordinates 949052..949225 Crick
 +
|[https://www.yeastgenome.org/reference/S000179595 Makanae et al 2015] PMID:25781884
 
|-
 
|-
 
|VII
 
|VII
−
|ROK1/YGL171W
+
|[https://www.yeastgenome.org/locus/S000003139 ROK1/YGL171W]
−
|Added two new uORFs
+
|Two new uORFs
−
uORF1: 182286..182407
+
*coordinates uORF1: 182286..182407
−
uORF2: 182291..182329
+
*coordinates uORF2: 182291..182329
−
|PMID:20969870
+
|[https://www.yeastgenome.org/reference/S000139084 Jeon and Kim 2010] PMID:20969870
 
|-
 
|-
 
|VIII
 
|VIII
−
|YHR052C-B
+
|[https://www.yeastgenome.org/locus/S000303807 YHR052C-B]
 
|New ORF
 
|New ORF
−
|PMID:29897761
+
*coordinates: 212519..212692 Crick
 +
|[https://www.yeastgenome.org/reference/S000217202 He et al 2018] PMID:29897761
 
|-
 
|-
 
|VIII
 
|VIII
−
|YHR054C-B
+
|[https://www.yeastgenome.org/locus/S000303808 YHR054C-B]
 
|New ORF
 
|New ORF
−
|PMID:29897761
+
*coordinates: 214517..214690 Crick
 +
|[https://www.yeastgenome.org/reference/S000217202 He et al 2018] PMID:29897761
 
|-
 
|-
 
|VIII
 
|VIII
−
|SUT169/YNCH0011W
+
|[https://www.yeastgenome.org/locus/S000303809 SUT169/YNCH0011W]
 
|New ncRNA
 
|New ncRNA
−
|PMID:19169243, PMID:22226051, PMID:27292640, PMID:28977638
+
*coordinates 378254..379237
 +
|[https://www.yeastgenome.org/reference/S000129105 Xu et al 2009] PMID:19169243,
 +
[https://www.yeastgenome.org/reference/S000148029 Geisler et al 2012] PMID:22226051,  
 +
<br>[https://www.yeastgenome.org/reference/S000183986 Huber et al 2016] PMID:27292640,  
 +
<br>[https://www.yeastgenome.org/reference/S000206477 Bunina et al 2017] PMID:28977638
 +
|-
 +
|X
 +
|[https://www.yeastgenome.org/locus/S000003773 YJR012C]
 +
|Moved start to Met76
 +
*old coordinates: 459795..460418 Crick
 +
*new coordinates: 459795..460193 Crick
 +
|[https://www.yeastgenome.org/reference/S000216555 Sadhu et al 2018] PMID:29632376
 
|-
 
|-
 
|X
 
|X
−
|YJR107C-A
+
|[https://www.yeastgenome.org/locus/S000303810 YJR107C-A]
 +
|New ORF
 +
*coordinates 628457..628693 Crick
 +
|[https://www.yeastgenome.org/reference/S000182052 Yagoub et al 2015] PMID:26554900,<br>[https://www.yeastgenome.org/reference/S000217202 He et al 2018] PMID:29897761
 +
|-
 +
|XI
 +
|[https://www.yeastgenome.org/locus/S000303811 YKL104W-A]
 
|New ORF
 
|New ORF
−
|PMID:26554900, PMID:29897761
+
*coordinates 245032..245286
 +
|[https://www.yeastgenome.org/reference/S000217202 He et al 2018] PMID:29897761
 
|-
 
|-
−
|X
+
|XII
−
|YJR012C
+
|[https://www.yeastgenome.org/locus/S000303812 YLR379W-A]
−
|Moved start to Met76
+
|New ORF
−
old coordinates: 459795..460418 Crick
+
*coordinates: 877444..877716
−
new coordinates: 459795..460193 Crick
+
|Internal reanalysis of results from [https://www.yeastgenome.org/reference/S000179596 Song et al 2015] to find and annotate missing S288C ORFs PMID:25781462
−
|PMID:29632376
 
 
|-
 
|-
 +
|XII
 +
|[https://www.yeastgenome.org/locus/S000029714 NTS1-2], [https://www.yeastgenome.org/locus/S000029329 NTS2-1], [https://www.yeastgenome.org/locus/S000029706 NTS2-2]
 +
|Change feature_type/SO_term from SO:0001637 rRNA_gene to SO:0000183 non_transcribed_region
 
|
 
|
−
|
 
−
|
 
 
|-
 
|-
−
|
+
|XIII
−
|
+
|[https://www.yeastgenome.org/locus/S000004755 LDO45/YMR147W]
−
|
+
|Shift stop to be same as LDO16/YMR148W, add intron
 +
*old coordinates 559199..559870
 +
*new coordinates 559199..559780, 560156..560812
 +
|[https://www.yeastgenome.org/reference/S000207266 Eisenberg-Bord et al 2018] PMID:29187527
 +
|-
 +
|XIII
 +
|[https://www.yeastgenome.org/locus/S000303813 YMR008C-A]
 +
|New ORF
 +
*coordinates 283081..283548 Crick
 +
|Internal reanalysis of results from [https://www.yeastgenome.org/reference/S000179596 Song et al 2015] to find and annotate missing S288C ORFs PMID:25781462
 +
|-
 +
|XIII
 +
|[https://www.yeastgenome.org/locus/S000303814 YNCM0001W] aka PHO84 lncRNA
 +
|New ncRNA
 +
*coordinates: 23564..26578
 +
|[https://www.yeastgenome.org/reference/S000124750 Camblong et al 2007] PMID:18022365
 +
|-
 +
|XIV
 +
|[https://www.yeastgenome.org/locus/S000005204 LTO1/YNL260C]
 +
|Move start to Met37
 +
*old coordinates: 156859..157455 Crick
 +
*new coordinates: 156859..157347 Crick
 +
|[https://www.yeastgenome.org/reference/S000180918 Paul et al 2015] PMID:26182403
 +
|-
 +
|XVI
 +
|[https://www.yeastgenome.org/locus/S000303815 YNCP0002W] aka GAL4 lncRNA
 +
|New ncRNA
 +
*coordinates: 79562..82648
 +
|[https://www.yeastgenome.org/reference/S000148029 Geisler et al 2012] PMID:22226051
 +
|}
 +
 
 +
==New systematic nomenclature system for noncoding RNA genes==
 +
{|border="1" style="border-collapse:collapse; width:90%" cellpadding="1"
 +
|-
 +
! style="background: #D8D8D8" | Chr
 +
! style="background: #D8D8D8" | Systematic_name
 +
! style="background: #D8D8D8" | Gene_name
 +
! style="background: #D8D8D8" | Alias
 +
! style="background: #D8D8D8" | Feature_type
 +
! style="background: #D8D8D8" | Coordinates
 +
! style="background: #D8D8D8" | Strand
 +
|-
 +
| I || [https://www.yeastgenome.org/locus/YNCA0001W YNCA0001W] || HRA1 ||  || ncRNA gene || 99305..99868 || +
 +
|-
 +
| I || [https://www.yeastgenome.org/locus/YNCA0002W YNCA0002W] || TRN1 || tP(UGG)A, tRNA-Pro || tRNA gene || 139152..139254 || +
 +
|-
 +
| I || [https://www.yeastgenome.org/locus/YNCA0003W YNCA0003W] || SNR18 || snR18 || snoRNA gene || 142367..142468 || +
 +
|-
 +
| I || [https://www.yeastgenome.org/locus/YNCA0004W YNCA0004W] || TGA1 || tA(UGC)A, tRNA-Ala || tRNA gene || 166267..166339 || +
 +
|-
 +
| I || [https://www.yeastgenome.org/locus/YNCA0005W YNCA0005W] || SUP56 || tL(CAA)A, tRNA-Leu || tRNA gene || 181141..181254 || +
 +
|-
 +
| I || [https://www.yeastgenome.org/locus/YNCA0006C YNCA0006C] ||  || tS(AGA)A, tRNA-Ser || tRNA gene || 182522..182603 || -
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0001W YNCB0001W] ||  || tL(UAA)B1, tRNA-Leu || tRNA gene || 9583..9666 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0002W YNCB0002W] ||  || tF(GAA)B, tRNA-Phe || tRNA gene || 36398..36488 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0003W YNCB0003W] || SNR56 || snR56 || snoRNA gene || 88190..88277 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0004W YNCB0004W] ||  || tI(AAU)B, tRNA-Ile || tRNA gene || 197494..197567 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0005C YNCB0005C] ||  || tG(GCC)B, tRNA-Gly || tRNA gene || 197629..197699 || -
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0006W YNCB0006W] ||  || tS(AGA)B, tRNA-Ser || tRNA gene || 227075..227156 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0007W YNCB0007W] ||  || tT(AGU)B, tRNA-Thr || tRNA gene || 266378..266450 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0008W YNCB0008W] ||  || GAL10-ncRNA || ncRNA gene || 276805..280645  || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0009C YNCB0009C] || SNR161 || snR161 || snoRNA gene || 307185..307345 || -
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0010W YNCB0010W] || TLC1 ||  || telomerase RNA gene || 307587..308887 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0011C YNCB0011C] ||  || tV(UAC)B, tRNA-Val || tRNA gene || 326792..326865 || -
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0012W YNCB0012W] ||  || tL(UAA)B2, tRNA-Leu || tRNA gene || 347603..347686 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0013W YNCB0013W] ||  || tQ(UUG)B, tRNA-Gln || tRNA gene || 350827..350898 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0014W YNCB0014W] || TBRT || XUT_2F-154 || ncRNA gene || 376610..378633 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0015W YNCB0015W] ||  || tR(UCU)B, tRNA-Arg || tRNA gene || 405878..405949 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0016W YNCB0016W] ||  || tD(GUC)B, tRNA-Asp || tRNA gene || 405960..406031 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0017C YNCB0017C] ||  || tC(GCA)B, tRNA-Cys || tRNA gene || 643007..643078 || -
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0018W YNCB0018W] ||  || tE(UUC)B, tRNA-Glu || tRNA gene || 645167..645238 || +
 +
|-
 +
| II || [https://www.yeastgenome.org/locus/YNCB0019C YNCB0019C] || LSR1 ||  || snRNA gene || 680688..681862 || -
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0001C YNCC0001C] ||  || tE(UUC)C, tRNA-Glu || tRNA gene || 82462..82533 || -
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0002W YNCC0002W] || SUP53 || tL(CAA)C, tRNA-Leu || tRNA gene || 90859..90972 || +
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0003C YNCC0003C] || SNR43 || snR43 || snoRNA gene || 107504..107712 || -
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0004C YNCC0004C] || SUF2 || tP(AGG)C, tRNA-Pro || tRNA gene || 123577..123648 || -
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0005W YNCC0005W] ||  || tN(GUU)C, tRNA-Asn || tRNA gene || 127716..127789 || +
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0006C YNCC0006C] || SNR33 || snR33 || snoRNA gene || 142364..142546 || -
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0007C YNCC0007C] || SUF16 || tG(GCC)C, tRNA-Gly || tRNA gene || 142701..142771 || -
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0008W YNCC0008W] ||  || tM(CAU)C, tRNA-Met || tRNA gene || 149920..149991 || +
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0009C YNCC0009C] ||  || tK(CUU)C, tRNA-Lys || tRNA gene || 151284..151356 || -
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0010C YNCC0010C] ||  || tQ(UUG)C, tRNA-Gln || tRNA gene || 168301..168372 || -
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0011W YNCC0011W] || SNR65 || snR65 || snoRNA gene || 177183..177282 || +
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0012C YNCC0012C] || SNR189 || snR189 || snoRNA gene || 178610..178798 || -
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0013W YNCC0013W] || SUP61 || tS(CGA)C, tRNA-Ser || tRNA gene || 227942..228042 || +
 +
|-
 +
| III || [https://www.yeastgenome.org/locus/YNCC0014W YNCC0014W] ||  || tT(AGU)C, tRNA-Thr || tRNA gene || 295484..295556 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0001W YNCD0001W] ||  || tG(GCC)D1, tRNA-Gly || tRNA gene || 83548..83618 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0002C YNCD0002C] || SNR63 || snR63 || snoRNA gene || 323217..323471 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0003W YNCD0003W] ||  || tK(UUU)D, tRNA-Lys || tRNA gene || 359577..359672 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0004W YNCD0004W] ||  || tA(AGC)D, tRNA-Ala || tRNA gene || 410379..410451 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0005C YNCD0005C] ||  || tT(AGU)D, tRNA-Thr || tRNA gene || 434264..434336 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0006W YNCD0006W] ||  || tS(AGA)D1, tRNA-Ser || tRNA gene || 437772..437853 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0007C YNCD0007C] ||  || tV(UAC)D, tRNA-Val || tRNA gene || 488797..488870 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0008W YNCD0008W] ||  || tL(UAA)D, tRNA-Leu || tRNA gene || 519743..519826 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0009W YNCD0009W] ||  || tQ(UUG)D1, tRNA-Gln || tRNA gene || 520972..521043 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0010C YNCD0010C] || SNR47 || snR47 || snoRNA gene || 541602..541700 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0011W YNCD0011W] ||  || tR(UCU)D, tRNA-Arg || tRNA gene || 568882..568953 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0012W YNCD0012W] ||  || tD(GUC)D, tRNA-Asp || tRNA gene || 568964..569035 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0013C YNCD0013C] ||  || tR(ACG)D, tRNA-Arg || tRNA gene || 619969..620041 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0014C YNCD0014C] ||  || tQ(UUG)D2, tRNA-Gln || tRNA gene || 645153..645224 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0015C YNCD0015C] ||  || tI(AAU)D, tRNA-Ile || tRNA gene || 668007..668080 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0016C YNCD0016C] ||  || tQ(UUG)D3, tRNA-Gln || tRNA gene || 802731..802802 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0017W YNCD0017W] ||  || tI(UAU)D, tRNA-Ile || tRNA gene || 884361..884493 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0018W YNCD0018W] || SUP2 || tY(GUA)D, tRNA-Tyr || tRNA gene || 946312..946400 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0019C YNCD0019C] ||  || tS(AGA)D2, tRNA-Ser || tRNA gene || 980974..981055 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0020W YNCD0020W] ||  || tG(GCC)D2, tRNA-Gly || tRNA gene || 992832..992902 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0021C YNCD0021C] ||  || tE(CUC)D, tRNA-Glu || tRNA gene || 1017207..1017278 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0022C YNCD0022C] ||  || tV(CAC)D, tRNA-Val || tRNA gene || 1075472..1075544 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0023C YNCD0023C] ||  || tF(GAA)D, tRNA-Phe || tRNA gene || 1095370..1095461 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0024C YNCD0024C] ||  || tX(XXX)D || tRNA gene || 1150842..1150941 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0025W YNCD0025W] || EMT1 || tM(CAU)D, tRNA-Met || tRNA gene || 1175829..1175901 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0026W YNCD0026W] ||  || tK(CUU)D1, tRNA-Lys || tRNA gene || 1201750..1201822 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0027C YNCD0027C] || SUF3 || tG(CCC)D, tRNA-Gly || tRNA gene || 1257008..1257079 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0028W YNCD0028W] ||  || tS(AGA)D3, tRNA-Ser || tRNA gene || 1305630..1305712 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0029C YNCD0029C] ||  || tK(CUU)D2, tRNA-Lys || tRNA gene || 1352466..1352538 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0030W YNCD0030W] || SNR13 || snR13 || snoRNA gene || 1402919..1403042 || +
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0031C YNCD0031C] ||  || tL(CAA)D, tRNA-Leu || tRNA gene || 1461715..1461829 || -
 +
|-
 +
| IV || [https://www.yeastgenome.org/locus/YNCD0032C YNCD0032C] || SNR84 || snR84 || snoRNA gene || 1492477..1493026 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0001C YNCE0001C] || SNR80 || snR80 || snoRNA gene || 52150..52320 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0002W YNCE0002W] || SNR67 || snR67 || snoRNA gene || 61352..61433 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0003W YNCE0003W] || SNR53 || snR53 || snoRNA gene || 61699..61789 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0004C YNCE0004C] ||  || tG(GCC)E, tRNA-Gly || tRNA gene || 61890..61960 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0005W YNCE0005W] ||  || tS(AGA)E, tRNA-Ser || tRNA gene || 86604..86685 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0006W YNCE0006W] || IMT4 || tM(CAU)E, tRNA-Met || tRNA gene || 100133..100204 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0007C YNCE0007C] || RPR1 ||  || ncRNA gene || 117667..118035 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0008C YNCE0008C] ||  || tQ(UUG)E2, tRNA-Gln || tRNA gene || 131082..131153 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0009C YNCE0009C] ||  || tK(CUU)E1, tRNA-Lys || tRNA gene || 135425..135497 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0010W YNCE0010W] ||  || tR(UCU)E, tRNA-Arg || tRNA gene || 138666..138737 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0011C YNCE0011C] || SNR14 || snR14 || snRNA gene || 167427..167586 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0012W YNCE0012W] ||  || tE(UUC)E1, tRNA-Glu || tRNA gene || 177099..177170 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0013W YNCE0013W] ||  || tH(GUG)E1, tRNA-His || tRNA gene || 207357..207428 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0014W YNCE0014W] ||  || tQ(UUG)E1, tRNA-Gln || tRNA gene || 250286..250357 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0015C YNCE0015C] || SUP19 || tS(UGA)E, tRNA-Ser || tRNA gene || 288443..288524 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0016C YNCE0016C] ||  || tA(UGC)E, tRNA-Ala || tRNA gene || 312023..312095 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0017W YNCE0017W] || SRG1 ||  || ncRNA gene || 322212..322762 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0018W YNCE0018W] ||  || tE(UUC)E2, tRNA-Glu || tRNA gene || 354934..355005 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0019W YNCE0019W] || SNR4 || snR4 || snoRNA gene || 424698..424883 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0020C YNCE0020C] || SNR52 || snR52 || snoRNA gene || 431129..431220 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0021C YNCE0021C] ||  || tH(GUG)E2, tRNA-His || tRNA gene || 434541..434612 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0022C YNCE0022C] ||  || tK(CUU)E2, tRNA-Lys || tRNA gene || 435752..435824 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0023W YNCE0023W] ||  || tV(AAC)E1, tRNA-Val || tRNA gene || 438700..438773 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0024W YNCE0024W] || SCR1 ||  || ncRNA gene || 441987..442508 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0025C YNCE0025C] ||  || tI(AAU)E1, tRNA-Ile || tRNA gene || 443202..443275 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0026W YNCE0026W] ||  || tV(AAC)E2, tRNA-Val || tRNA gene || 469457..469530 || +
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0027C YNCE0027C] ||  || tE(UUC)E3, tRNA-Glu || tRNA gene || 487331..487402 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0028C YNCE0028C] ||  || tR(ACG)E, tRNA-Arg || tRNA gene || 492352..492424 || -
 +
|-
 +
| V || [https://www.yeastgenome.org/locus/YNCE0029C YNCE0029C] ||  || tI(AAU)E2, tRNA-Ile || tRNA gene || 551285..551358 || -
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0001C YNCF0001C] || RUF21 ||  || ncRNA gene || 57815..58521 || -
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0002W YNCF0002W] || SUF9 || tP(UGG)F, tRNA-Pro || tRNA gene || 101376..101478 || +
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0003C YNCF0003C] || RUF20 ||  || ncRNA gene || 131061..131503 || -
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0004C YNCF0004C] ||  || tN(GUU)F, tRNA-Asn || tRNA gene || 137486..137559 || -
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0005C YNCF0005C] ||  || tF(GAA)F, tRNA-Phe || tRNA gene || 157916..158007 || -
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0006W YNCF0006W] || SUF20 || tG(GCC)F1, tRNA-Gly || tRNA gene || 162228..162298 || +
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0007W YNCF0007W] || SUP11 || tY(GUA)F1, tRNA-Tyr || tRNA gene || 167437..167525 || +
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0008C YNCF0008C] ||  || tG(GCC)F2, tRNA-Gly || tRNA gene || 180974..181044 || -
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0009C YNCF0009C] ||  || tS(GCU)F, tRNA-Ser || tRNA gene || 191513..191613 || -
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0010C YNCF0010C] || RUF22 ||  || ncRNA gene || 199299..199813 || -
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0011C YNCF0011C] ||  || tA(AGC)F, tRNA-Ala || tRNA gene || 204924..204996 || -
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0012C YNCF0012C] || SUP6 || tY(GUA)F2, tRNA-Tyr || tRNA gene || 210619..210707 || -
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0013W YNCF0013W] || RUF23 ||  || ncRNA gene || 221714..221967 || +
 +
|-
 +
| VI || [https://www.yeastgenome.org/locus/YNCF0014C YNCF0014C] ||  || tK(CUU)F, tRNA-Lys || tRNA gene || 226688..226760 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0001C YNCG0001C] || RME3 ||  || ncRNA gene || 33109..35013 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0002C YNCG0002C] ||  || tV(AAC)G3, tRNA-Val || tRNA gene || 73829..73902 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0003C YNCG0003C] ||  || tH(GUG)G1, tRNA-His || tRNA gene || 110625..110696 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0004W YNCG0004W] ||  || tK(UUU)G1, tRNA-Lys || tRNA gene || 115488..115583 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0005W YNCG0005W] ||  || tK(CUU)G1, tRNA-Lys || tRNA gene || 122269..122341 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0006C YNCG0006C] || RME2 ||  || ncRNA gene || 141898..144120 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0007C YNCG0007C] ||  || tK(CUU)G2, tRNA-Lys || tRNA gene || 185714..185786 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0008W YNCG0008W] ||  || tL(CAA)G1, tRNA-Leu || tRNA gene || 205521..205634 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0009C YNCG0009C] ||  || tW(CCA)G1, tRNA-Trp || tRNA gene || 287350..287455 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0010W YNCG0010W] || SNR82 || snR82 || snoRNA gene || 316788..317055 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0011W YNCG0011W] ||  || tH(GUG)G2, tRNA-His || tRNA gene || 319781..319852 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0012W YNCG0012W] || SOE1 || tE(UUC)G1, tRNA-Glu || tRNA gene || 328583..328654 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0013W YNCG0013W] || SNR10 || snR10 || snoRNA gene || 345986..346230 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0014C YNCG0014C] || SNR39 || snR39 || snoRNA gene || 365163..365251 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0015C YNCG0015C] || SNR39B || snR39B || snoRNA gene || 366374..366469 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0016C YNCG0016C] ||  || tE(UUC)G2, tRNA-Glu || tRNA gene || 401527..401598 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0017W YNCG0017W] ||  || tR(UCU)G1, tRNA-Arg || tRNA gene || 405470..405541 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0018C YNCG0018C] ||  || tV(AAC)G1, tRNA-Val || tRNA gene || 412294..412367 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0019W YNCG0019W] || SUP54 || tL(CAA)G2, tRNA-Leu || tRNA gene || 423092..423205 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0020C YNCG0020C] ||  || tF(GAA)G, tRNA-Phe || tRNA gene || 440716..440807 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0021W YNCG0021W] ||  || tD(GUC)G1, tRNA-Asp || tRNA gene || 531610..531681 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0022W YNCG0022W] ||  || tE(UUC)G3, tRNA-Glu || tRNA gene || 541850..541921 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0023C YNCG0023C] ||  || tD(GUC)G2, tRNA-Asp || tRNA gene || 544577..544648 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0024W YNCG0024W] || SNR46 || snR46 || snoRNA gene || 545370..545566 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0025C YNCG0025C] ||  || tS(AGA)G, tRNA-Ser || tRNA gene || 561662..561743 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0026W YNCG0026W] || SNR48 || snR48 || snoRNA gene || 609584..609696 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0027W YNCG0027W] ||  || tT(UGU)G1, tRNA-Thr || tRNA gene || 661749..661820 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0028W YNCG0028W] ||  || tL(GAG)G, tRNA-Leu || tRNA gene || 700675..700756 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0029C YNCG0029C] ||  || tK(UUU)G2, tRNA-Lys || tRNA gene || 700953..701048 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0030C YNCG0030C] ||  || tC(GCA)G, tRNA-Cys || tRNA gene || 707108..707179 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0031W YNCG0031W] ||  || tN(GUU)G, tRNA-Asn || tRNA gene || 731137..731210 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0032W YNCG0032W] ||  || tR(UCU)G3, tRNA-Arg || tRNA gene || 736340..736411 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0033W YNCG0033W] ||  || tI(AAU)G, tRNA-Ile || tRNA gene || 739122..739195 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0034W YNCG0034W] ||  || tA(AGC)G, tRNA-Ala || tRNA gene || 774349..774421 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0035W YNCG0035W] || SUF4 || tG(UCC)G, tRNA-Gly || tRNA gene || 779616..779687 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0036W YNCG0036W] ||  || tA(UGC)G, tRNA-Ala || tRNA gene || 794417..794489 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0037W YNCG0037W] ||  || tV(AAC)G2, tRNA-Val || tRNA gene || 823482..823555 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0038C YNCG0038C] ||  || tR(UCU)G2, tRNA-Arg || tRNA gene || 828723..828794 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0039W YNCG0039W] ||  || tG(GCC)G1, tRNA-Gly || tRNA gene || 845649..845719 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0040C YNCG0040C] ||  || tL(CAA)G3, tRNA-Leu || tRNA gene || 857378..857491 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0041W YNCG0041W] ||  || tK(CUU)G3, tRNA-Lys || tRNA gene || 876394..876466 || +
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0042C YNCG0042C] ||  || tW(CCA)G2, tRNA-Trp || tRNA gene || 878710..878815 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0043C YNCG0043C] ||  || tG(GCC)G2, tRNA-Gly || tRNA gene || 930953..931023 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0044C YNCG0044C] || SNR7-L || snR7-L || snRNA gene || 939459..939672 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0045C YNCG0045C] || SNR7-S || snR7-S || snRNA gene || 939494..939672 || -
 +
|-
 +
| VII || [https://www.yeastgenome.org/locus/YNCG0046W YNCG0046W] ||  || tT(UGU)G2, tRNA-Thr || tRNA gene || 1004216..1004287 || +
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0001W YNCH0001W] ||  || tH(GUG)H, tRNA-His || tRNA gene || 62755..62826 || +
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0002C YNCH0002C] ||  || tV(AAC)H, tRNA-Val || tRNA gene || 85298..85371 || -
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0003C YNCH0003C] ||  || tT(AGU)H, tRNA-Thr || tRNA gene || 116107..116179 || -
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0004C YNCH0004C] ||  || tS(AGA)H, tRNA-Ser || tRNA gene || 133026..133107 || -
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0005W YNCH0005W] ||  || tQ(UUG)H, tRNA-Gln || tRNA gene || 134321..134392 || +
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0006C YNCH0006C] ||  || tA(AGC)H, tRNA-Ala || tRNA gene || 146242..146314 || -
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0007W YNCH0007W] || RUF5-1 ||  || ncRNA gene || 212409..213118 || +
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0008W YNCH0008W] || RUF5-2 ||  || ncRNA gene || 214407..215116 || +
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0009C YNCH0009C] ||  || tF(GAA)H1, tRNA-Phe || tRNA gene || 237848..237939 || -
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0010C YNCH0010C] ||  || tF(GAA)H2, tRNA-Phe || tRNA gene || 358478..358569 || -
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0011W YNCH0011W] || SUT169 ||  || ncRNA gene || 378254..379237 || +
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0012W YNCH0012W] || SNR32 || snR32 || snoRNA gene || 381540..381727 || +
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0013C YNCH0013C] || SUF8 || tP(UGG)H, tRNA-Pro || tRNA gene || 388893..388995 || -
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0014W YNCH0014W] || SNR71 || snR71 || snoRNA gene || 411228..411317 || +
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0015W YNCH0015W] ||  || tT(UGU)H, tRNA-Thr || tRNA gene || 466990..467061 || +
 +
|-
 +
| VIII || [https://www.yeastgenome.org/locus/YNCH0016C YNCH0016C] ||  || tV(CAC)H, tRNA-Val || tRNA gene || 475706..475778 || -
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0001W YNCI0001W] || SNR68 || snR68 || snoRNA gene || 97111..97246 || +
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0002W YNCI0002W] ||  || tT(AGU)I1, tRNA-Thr || tRNA gene || 175031..175103 || +
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0003C YNCI0003C] ||  || tI(AAU)I1, tRNA-Ile || tRNA gene || 183440..183513 || -
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0004W YNCI0004W] ||  || tE(CUC)I, tRNA-Glu || tRNA gene || 197592..197663 || +
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0005W YNCI0005W] ||  || tI(AAU)I2, tRNA-Ile || tRNA gene || 210665..210738 || +
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0006W YNCI0006W] || SUP17 || tS(UGA)I, tRNA-Ser || tRNA gene || 248850..248931 || +
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0007C YNCI0007C] ||  || tK(CUU)I, tRNA-Lys || tRNA gene || 300228..300300 || -
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0008C YNCI0008C] ||  || tD(GUC)I1, tRNA-Asp || tRNA gene || 324303..324374 || -
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0009W YNCI0009W] ||  || tT(AGU)I2, tRNA-Thr || tRNA gene || 325748..325820 || +
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0010C YNCI0010C] ||  || tD(GUC)I2, tRNA-Asp || tRNA gene || 336349..336420 || -
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0011W YNCI0011W] ||  || tE(UUC)I, tRNA-Glu || tRNA gene || 370417..370488 || +
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0012 YNCI0012] || ICR1 ||  || ncRNA gene || 393884..397082 || -
 +
|-
 +
| IX || [https://www.yeastgenome.org/locus/YNCI0013W YNCI0013W] || PWR1 ||  || ncRNA gene || 395999..396939 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0001C YNCJ0001C] ||  || tT(AGU)J, tRNA-Thr || tRNA gene || 59100..59172 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0002C YNCJ0002C] ||  || tE(UUC)J, tRNA-Glu || tRNA gene || 115939..116010 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0003C YNCJ0003C] || SNR128 || snR128 || snoRNA gene || 139566..139691 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0004C YNCJ0004C] || SNR190 || snR190 || snoRNA gene || 139761..139950 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0005C YNCJ0005C] ||  || tA(AGC)J, tRNA-Ala || tRNA gene || 197313..197385 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0006W YNCJ0006W] ||  || tD(GUC)J1, tRNA-Asp || tRNA gene || 204735..204806 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0007C YNCJ0007C] || SNR37 || snR37 || snoRNA gene || 228094..228479 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0008W YNCJ0008W] ||  || tR(ACG)J, tRNA-Arg || tRNA gene || 233939..234011 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0009C YNCJ0009C] || SNR60 || snR60 || snoRNA gene || 349130..349233 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0010W YNCJ0010W] || SUP7 || tY(GUA)J1, tRNA-Tyr || tRNA gene || 354244..354332 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0011W YNCJ0011W] ||  || tR(UCU)J1, tRNA-Arg || tRNA gene || 355374..355445 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0012W YNCJ0012W] ||  || tD(GUC)J2, tRNA-Asp || tRNA gene || 355456..355527 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0013C YNCJ0013C] ||  || tD(GUC)J3, tRNA-Asp || tRNA gene || 374424..374495 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0014C YNCJ0014C] ||  || tR(UCU)J2, tRNA-Arg || tRNA gene || 374506..374577 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0015W YNCJ0015W] ||  || tV(AAC)J, tRNA-Val || tRNA gene || 378360..378433 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0016C YNCJ0016C] || EMT5 || tM(CAU)J1, tRNA-Met || tRNA gene || 391043..391115 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0017C YNCJ0017C] ||  || tG(GCC)J1, tRNA-Gly || tRNA gene || 396726..396796 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0018W YNCJ0018W] ||  || tK(CUU)J, tRNA-Lys || tRNA gene || 414966..415038 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0019C YNCJ0019C] ||  || tW(CCA)J, tRNA-Trp || tRNA gene || 415931..416036 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0020W YNCJ0020W] || EMT3 || tM(CAU)J2, tRNA-Met || tRNA gene || 422937..423009 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0021C YNCJ0021C] || SUP51 || tL(UAA)J, tRNA-Leu || tRNA gene || 424432..424515 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0022C YNCJ0022C] || IMT3 || tM(CAU)J3, tRNA-Met || tRNA gene || 517813..517884 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0023C YNCJ0023C] ||  || tS(AGA)J, tRNA-Ser || tRNA gene || 524012..524093 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0024W YNCJ0024W] || SUF23 || tG(GCC)J2, tRNA-Gly || tRNA gene || 531828..531898 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0025W YNCJ0025W] || HSX1 || tR(CCU)J, tRNA-Arg || tRNA gene || 538555..538626 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0026W YNCJ0026W] ||  || tD(GUC)J4, tRNA-Asp || tRNA gene || 541508..541579 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0027C YNCJ0027C] || SUP4 || tY(GUA)J2, tRNA-Tyr || tRNA gene || 542956..543044 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0028C YNCJ0028C] || IRT1 ||  || ncRNA gene || 605936..607424 || -
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0029W YNCJ0029W] ||  || tL(UAG)J, tRNA-Leu || tRNA gene || 617919..618019 || +
 +
|-
 +
| X || [https://www.yeastgenome.org/locus/YNCJ0030W YNCJ0030W] || SNR3 || snR3 || snoRNA gene || 663749..663942 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0001W YNCK0001W] || SNR64 || snR64 || snoRNA gene || 38811..38911 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0002C YNCK0002C] || TRT2 || tT(CGU)K, tRNA-Thr || tRNA gene || 46735..46806 || -
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0003W YNCK0003W] ||  || tN(GUU)K, tRNA-Asn || tRNA gene || 74624..74697 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0004W YNCK0004W] ||  || tL(UAA)K, tRNA-Leu || tRNA gene || 84208..84291 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0005C YNCK0005C] ||  || tE(UUC)K, tRNA-Glu || tRNA gene || 141018..141089 || -
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0006C YNCK0006C] ||  || tR(UCU)K, tRNA-Arg || tRNA gene || 162487..162558 || -
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0007W YNCK0007W] ||  || tK(CUU)K, tRNA-Lys || tRNA gene || 202999..203071 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0008W YNCK0008W] ||  || tA(AGC)K1, tRNA-Ala || tRNA gene || 219895..219967 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0009W YNCK0009W] || SNR38 || snR38 || snoRNA gene || 283185..283279 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0010W YNCK0010W] ||  || tW(CCA)K, tRNA-Trp || tRNA gene || 302918..303023 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0011C YNCK0011C] ||  || tV(AAC)K1, tRNA-Val || tRNA gene || 308144..308217 || -
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0012C YNCK0012C] ||  || tH(GUG)K, tRNA-His || tRNA gene || 313401..313472 || -
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0013W YNCK0013W] || SNR69 || snR69 || snoRNA gene || 364776..364876 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0014W YNCK0014W] ||  || tV(AAC)K2, tRNA-Val || tRNA gene || 379680..379753 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0015C YNCK0015C] || SNR87 || snR87 || snoRNA gene || 431030..431138 || -
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0016W YNCK0016W] ||  || tL(CAA)K, tRNA-Leu || tRNA gene || 458557..458670 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0017W YNCK0017W] ||  || tR(ACG)K, tRNA-Arg || tRNA gene || 490968..491040 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0018C YNCK0018C] ||  || tD(GUC)K, tRNA-Asp || tRNA gene || 513332..513403 || -
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0019W YNCK0019W] ||  || tA(AGC)K2, tRNA-Ala || tRNA gene || 517988..518060 || +
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0020C YNCK0020C] || SNR42 || snR42 || snoRNA gene || 559016..559366 || -
 +
|-
 +
| XI || [https://www.yeastgenome.org/locus/YNCK0021W YNCK0021W] ||  || tK(UUU)K, tRNA-Lys || tRNA gene || 578965..579060 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0001W YNCL0001W] ||  || tP(UGG)L, tRNA-Pro || tRNA gene || 92548..92650 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0002C YNCL0002C] ||  || tS(AGA)L, tRNA-Ser || tRNA gene || 167944..168025 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0003W YNCL0003W] || SNR30 || snR30 || snoRNA gene || 198784..199389 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0004C YNCL0004C] ||  || tA(UGC)L, tRNA-Ala || tRNA gene || 214883..214955 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0005C YNCL0005C] || SNR79 || snR79 || snoRNA gene || 348427..348510 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0006W YNCL0006W] || SNR6 || snR6 || snRNA gene || 366235..366346 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0007W YNCL0007W] ||  || tR(ACG)L, tRNA-Arg || tRNA gene || 374355..374427 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0008W YNCL0008W] ||  || tD(GUC)L1, tRNA-Asp || tRNA gene || 427132..427203 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0009C YNCL0009C] ||  || tQ(UUG)L, tRNA-Gln || tRNA gene || 448650..448721 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0010C YNCL0010C] || RDN37-1 ||  || rRNA gene || 451575..458432 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0011C YNCL0011C] || ETS2-1 ||  || rRNA gene || 451575..451785 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0012C YNCL0012C] || RDN25-1 ||  || rRNA gene || 451786..455181 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0013C YNCL0013C] || ITS2-1 ||  || rRNA gene || 455182..455413 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0014C YNCL0014C] || RDN58-1 ||  || rRNA gene || 455414..455571 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0015C YNCL0015C] || ITS1-1 ||  || rRNA gene || 455572..455932 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0016C YNCL0016C] || RDN18-1 ||  || rRNA gene || 455933..457732 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0017C YNCL0017C] || ETS1-1 ||  || rRNA gene || 457733..458432 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0018W YNCL0018W] || RDN5-1 ||  || rRNA gene || 459676..459796 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0019C YNCL0019C] || ETS2-2 ||  || rRNA gene || 460712..460922 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0020C YNCL0020C] || RDN37-2 ||  || rRNA gene || 460712..467569 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0021C YNCL0021C] || RDN25-2 ||  || rRNA gene || 460923..464318 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0022C YNCL0022C] || ITS2-2 ||  || rRNA gene || 464319..464550 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0023C YNCL0023C] || RDN58-2 ||  || rRNA gene || 464551..464708 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0024C YNCL0024C] || ITS1-2 ||  || rRNA gene || 464709..465069 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0025C YNCL0025C] || RDN18-2 ||  || rRNA gene || 465070..466869 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0026C YNCL0026C] || ETS1-2 ||  || rRNA gene || 466870..467569 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0027W YNCL0027W] || RDN5-2 ||  || rRNA gene || 468813..468931 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0028W YNCL0028W] || RDN5-3 ||  || rRNA gene || 472465..472583 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0029W YNCL0029W] || RDN5-4 ||  || rRNA gene || 482045..482163 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0030W YNCL0030W] || RDN5-5 ||  || rRNA gene || 485697..485815 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0031W YNCL0031W] || RDN5-6 ||  || rRNA gene || 489349..489469 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0032C YNCL0032C] ||  || tL(UAG)L1, tRNA-Leu || tRNA gene || 592519..592619 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0033C YNCL0033C] ||  || tI(UAU)L, tRNA-Ile || tRNA gene || 605300..605432 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0034W YNCL0034W] ||  || tL(CAA)L, tRNA-Leu || tRNA gene || 628383..628497 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0035C YNCL0035C] ||  || tA(AGC)L, tRNA-Ala || tRNA gene || 656934..657006 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0036C YNCL0036C] ||  || tV(AAC)L, tRNA-Val || tRNA gene || 687859..687932 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0037W YNCL0037W] ||  || tL(UAG)L2, tRNA-Leu || tRNA gene || 732090..732190 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0038W YNCL0038W] ||  || tI(AAU)L1, tRNA-Ile || tRNA gene || 734802..734875 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0039W YNCL0039W] ||  || tX(XXX)L || tRNA gene || 784354..784453 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0040W YNCL0040W] ||  || tD(GUC)L2, tRNA-Asp || tRNA gene || 793918..793989 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0041C YNCL0041C] || SNR61 || snR61 || snoRNA gene || 794486..794575 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0042C YNCL0042C] || SNR55 || snR55 || snoRNA gene || 794697..794794 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0043C YNCL0043C] || SNR57 || snR57 || snoRNA gene || 794937..795024 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0044W YNCL0044W] ||  || tE(UUC)L, tRNA-Glu || tRNA gene || 797178..797249 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0045W YNCL0045W] || TRR4 || tR(CCG)L, tRNA-Arg || tRNA gene || 818609..818680 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0046W YNCL0046W] || SNR44 || snR44 || snoRNA gene || 856710..856920 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0047W YNCL0047W] ||  || tK(UUU)L, tRNA-Lys || tRNA gene || 875376..875471 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0048W YNCL0048W] || SNR34 || snR34 || snoRNA gene || 899180..899382 || +
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0049C YNCL0049C] ||  || tL(UAA)L, tRNA-Leu || tRNA gene || 962972..963055 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0050C YNCL0050C] ||  || tN(GUU)L, tRNA-Asn || tRNA gene || 975983..976056 || -
 +
|-
 +
| XII || [https://www.yeastgenome.org/locus/YNCL0051C YNCL0051C] ||  || tI(AAU)L2, tRNA-Ile || tRNA gene || 1052071..1052144 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0001W YNCM0001W] ||  || PHO84 lncRNA || ncRNA gene || 23564..26578 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0002C YNCM0002C] || SNR85 || snR85 || snoRNA gene || 67768..67938 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0003W YNCM0003W] || ZOD1 ||  || ncRNA gene || 91970..92027 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0004C YNCM0004C] ||  || tR(UCU)M2, tRNA-Arg || tRNA gene || 131825..131896 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0005C YNCM0005C] || SNR54 || snR54 || snoRNA gene || 163535..163620 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0006W YNCM0006W] || SUP5 || tY(GUA)M1, tRNA-Tyr || tRNA gene || 168795..168883 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0007C YNCM0007C] ||  || tG(GCC)M, tRNA-Gly || tRNA gene || 183898..183968 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0008C YNCM0008C] || SUF7 || tP(UGG)M, tRNA-Pro || tRNA gene || 196068..196170 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0009C YNCM0009C] ||  || tS(AGA)M, tRNA-Ser || tRNA gene || 259158..259239 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0010W YNCM0010W] ||  || tE(UUC)M, tRNA-Glu || tRNA gene || 290801..290872 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0011W YNCM0011W] || SNR78 || snR78 || snoRNA gene || 297278..297364 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0012W YNCM0012W] || SNR77 || snR77 || snoRNA gene || 297506..297593 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0013W YNCM0013W] || SNR76 || snR76 || snoRNA gene || 297725..297833 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0014W YNCM0014W] || SNR75 || snR75 || snoRNA gene || 297918..298006 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0015W YNCM0015W] || SNR74 || snR74 || snoRNA gene || 298138..298225 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0016W YNCM0016W] || SNR73 || snR73 || snoRNA gene || 298307..298412 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0017W YNCM0017W] || SNR72 || snR72 || snoRNA gene || 298554..298651 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0018C YNCM0018C] ||  || tA(AGC)M1, tRNA-Ala || tRNA gene || 321147..321219 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0019W YNCM0019W] ||  || tF(GAA)M, tRNA-Phe || tRNA gene || 352280..352370 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0020W YNCM0020W] ||  || tH(GUG)M, tRNA-His || tRNA gene || 363064..363135 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0021C YNCM0021C] ||  || tV(AAC)M1, tRNA-Val || tRNA gene || 372445..372518 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0022C YNCM0022C] ||  || tW(CCA)M, tRNA-Trp || tRNA gene || 379303..379408 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0023C YNCM0023C] ||  || tV(AAC)M2, tRNA-Val || tRNA gene || 420588..420661 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0024W YNCM0024W] ||  || tD(GUC)M, tRNA-Asp || tRNA gene || 463554..463625 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0025C YNCM0025C] ||  || tK(CUU)M, tRNA-Lys || tRNA gene || 480621..480693 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0026C YNCM0026C] || SNR24 || snR24 || snoRNA gene || 499984..500072 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0027W YNCM0027W] ||  || tL(CAA)M, tRNA-Leu || tRNA gene || 504895..505008 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0028C YNCM0028C] || EMT4 || tM(CAU)M, tRNA-Met || tRNA gene || 572883..572955 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0029C YNCM0029C] ||  || tV(AAC)M3, tRNA-Val || tRNA gene || 586636..586709 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0030W YNCM0030W] || SNR83 || snR83 || snoRNA gene || 626349..626654 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0031W YNCM0031W] || SNR11 || snR11 || snoRNA gene || 652275..652532 || +
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0032C YNCM0032C] || RNA170 ||  || ncRNA gene || 667288..667456 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0033C YNCM0033C] ||  || tR(UCU)M1, tRNA-Arg || tRNA gene || 747892..747963 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0034C YNCM0034C] || SNR86 || snR86 || snoRNA gene || 762110..763113 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0035C YNCM0035C] ||  || tA(AGC)M2, tRNA-Ala || tRNA gene || 768369..768441 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0036C YNCM0036C] || CDC65 || tQ(CUG)M, tRNA-Gln || tRNA gene || 808246..808317 || -
 +
|-
 +
| XIII || [https://www.yeastgenome.org/locus/YNCM0037W YNCM0037W] || SUP8 || tY(GUA)M2, tRNA-Tyr || tRNA gene || 837928..838016 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0001W YNCN0001W] || SNR40 || snR40 || snoRNA gene || 89210..89306 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0002C YNCN0002C] || SUF6 || tG(UCC)N, tRNA-Gly || tRNA gene || 96241..96312 || -
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0003W YNCN0003W] ||  || tN(GUU)N1, tRNA-Asn || tRNA gene || 102716..102789 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0004W YNCN0004W] ||  || tT(AGU)N1, tRNA-Thr || tRNA gene || 104805..104877 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0005C YNCN0005C] || SNR19 || snR19 || snRNA gene || 230105..230672 || -
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0006W YNCN0006W] ||  || tF(GAA)N, tRNA-Phe || tRNA gene || 374869..374959 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0007W YNCN0007W] ||  || tL(CAA)N, tRNA-Leu || tRNA gene || 443006..443119 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0008C YNCN0008C] ||  || tD(GUC)N, tRNA-Asp || tRNA gene || 519099..519169 || -
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0009W YNCN0009W] ||  || tP(UGG)N1, tRNA-Pro || tRNA gene || 547094..547196 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0010C YNCN0010C] ||  || tT(AGU)N2, tRNA-Thr || tRNA gene || 560693..560765 || -
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0011W YNCN0011W] ||  || tP(UGG)N2, tRNA-Pro || tRNA gene || 568115..568217 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0012C YNCN0012C] ||  || tI(AAU)N1, tRNA-Ile || tRNA gene || 569867..569940 || -
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0013W YNCN0013W] || NME1 ||  || snoRNA gene || 585587..585926 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0014W YNCN0014W] || SNR66 || snR66 || snoRNA gene || 586090..586175 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0015W YNCN0015W] ||  || tI(AAU)N2, tRNA-Ile || tRNA gene || 602312..602385 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0016C YNCN0016C] || SUF10 || tP(AGG)N, tRNA-Pro || tRNA gene || 631846..631917 || -
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0017W YNCN0017W] ||  || tN(GUU)N2, tRNA-Asn || tRNA gene || 632599..632672 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0018W YNCN0018W] || SNR49 || snR49 || snoRNA gene || 716120..716284 || +
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0019C YNCN0019C] || SNR191 || snR191 || snoRNA gene || 721938..722211 || -
 +
|-
 +
| XIV || [https://www.yeastgenome.org/locus/YNCN0020C YNCN0020C] ||  || tL(UAA)N, tRNA-Leu || tRNA gene || 726134..726217 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0001C YNCO0001C] || SUF1 || tG(UCC)O, tRNA-Gly || tRNA gene || 110962..111033 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0002W YNCO0002W] ||  || tT(AGU)O1, tRNA-Thr || tRNA gene || 113802..113874 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0003C YNCO0003C] || SNR58 || snR58 || snoRNA gene || 136088..136183 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0004C YNCO0004C] ||  || tG(GCC)O1, tRNA-Gly || tRNA gene || 226611..226681 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0005W YNCO0005W] ||  || tN(GUU)O1, tRNA-Asn || tRNA gene || 228331..228404 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0006W YNCO0006W] || SNR81 || snR81 || snoRNA gene || 234346..234546 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0007W YNCO0007W] || SNR50 || snR50 || snoRNA gene || 259489..259578 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0008W YNCO0008W] ||  || tS(GCU)O, tRNA-Ser || tRNA gene || 274673..274773 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0009W YNCO0009W] || SUF17 || tG(GCC)O2, tRNA-Gly || tRNA gene || 282164..282234 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0010W YNCO0010W] || SUP3 || tY(GUA)O, tRNA-Tyr || tRNA gene || 288192..288280 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0011W YNCO0011W] ||  || tP(UGG)O1, tRNA-Pro || tRNA gene || 301097..301198 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0012C YNCO0012C] ||  || tR(ACG)O, tRNA-ARg || tRNA gene || 340299..340371 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0013C YNCO0013C] ||  || tT(AGU)O2, tRNA-Thr || tRNA gene || 354041..354113 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0014C YNCO0014C] || SNR9 || snR9 || snoRNA gene || 407948..408134 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0015C YNCO0015C] || SNR62 || snR62 || snoRNA gene || 409765..409864 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0016W YNCO0016W] ||  || tK(UUU)O, tRNA-Lys || tRNA gene || 438643..438738 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0017W YNCO0017W] || SUF11 || tP(UGG)O2, tRNA-Pro || tRNA gene || 464450..464551 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0018W YNCO0018W] ||  || tN(GUU)O2, tRNA-Asn || tRNA gene || 487439..487512 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0019W YNCO0019W] ||  || tD(GUC)O, tRNA-Asp || tRNA gene || 571958..572029 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0020C YNCO0020C] || SUF5 || tG(CCC)O || tRNA gene || 594354..594425 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0021C YNCO0021C] ||  || tV(AAC)O || tRNA gene || 663812..663885 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0022C YNCO0022C] || SNR36 || snR36 || snoRNA gene || 680685..680866 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0023W YNCO0023W] || IMT1 || tM(CAU)O1, tRNA-Met || tRNA gene || 710201..710272 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0024C YNCO0024C] || SNR35 || snR35 || snoRNA gene || 759326..759529 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0025W YNCO0025W] || SNR17A || snR17a || snoRNA gene || 780107..780596 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0026W YNCO0026W] || SNR8 || snR8 || snoRNA gene || 832332..832521 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0027C YNCO0027C] || SNR31 || snR31 || snoRNA gene || 841958..842182 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0028W YNCO0028W] || SNR5 || snR5 || snoRNA gene || 842403..842606 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0029C YNCO0029C] ||  || tA(UGC)O, tRNA-Ala || tRNA gene || 854187..854259 || -
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0030W YNCO0030W] || EMT2 || tM(CAU)O2, tRNA-Met || tRNA gene || 976421..976493 || +
 +
|-
 +
| XV || [https://www.yeastgenome.org/locus/YNCO0031W YNCO0031W] ||  || tP(UGG)O3, tRNA-Pro || tRNA gene || 980683..980787 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0001C YNCP0001C] ||  || tW(CCA)P, tRNA-Trp || tRNA gene || 56169..56274 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0002W YNCP0002W] ||  || GAL4 lncRNA || ncRNA gene || 79562..82648 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0003W YNCP0003W] || SNR59 || snR59 || snoRNA gene || 173827..173904 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0004C YNCP0004C] ||  || tE(UUC)P, tRNA-Glu || tRNA gene || 210192..210263 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0005C YNCP0005C] || SNR17B || snR17b || snoRNA gene || 281056..281517 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0006C YNCP0006C] || IMT2 || tM(CAU)P, tRNA-Met || tRNA gene || 338848..338919 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0007C YNCP0007C] ||  || tC(GCA)P1, tRNA-Cys || tRNA gene || 435893..435964 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0008C YNCP0008C] ||  || tF(GAA)P1, tRNA-Phe || tRNA gene || 560198..560289 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0009W YNCP0009W] ||  || tG(GCC)P1, tRNA-Gly || tRNA gene || 572269..572339 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0010W YNCP0010W] ||  || tK(CUU)P, tRNA-Lys || tRNA gene || 582062..582134 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0011C YNCP0011C] ||  || tF(GAA)P2, tRNA-Phe || tRNA gene || 622540..622631 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0012W YNCP0012W] || SUP16 || tS(UGA)P, tRNA-Ser || tRNA gene || 689565..689646 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0013C YNCP0013C] || SNR51 || snR51 || snoRNA gene || 718700..718806 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0014C YNCP0014C] || SNR70 || snR70 || snoRNA gene || 718887..719050 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0015C YNCP0015C] || SNR41 || snR41 || snoRNA gene || 719148..719242 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0016W YNCP0016W] ||  || tT(UGU)P, tRNA-Thr || tRNA gene || 744284..744355 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0017C YNCP0017C] ||  || tK(UUU)P, tRNA-Lys || tRNA gene || 769207..769302 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0018C YNCP0018C] ||  || tC(GCA)P2, tRNA-Cys || tRNA gene || 775765..775836 || -
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0019W YNCP0019W] ||  || tN(GUU)P, tRNA-Asn || tRNA gene || 810676..810749 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0020W YNCP0020W] ||  || tI(AAU)P1, tRNA-Ile || tRNA gene || 819529..819602 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0021W YNCP0021W] || SNR45 || snR45 || snoRNA gene || 821732..821903 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0022W YNCP0022W] ||  || tA(AGC)P, tRNA-Ala || tRNA gene || 856902..856974 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0023W YNCP0023W] ||  || tG(GCC)P2, tRNA-Gly || tRNA gene || 860379..860449 || +
 +
|-
 +
| XVI || [https://www.yeastgenome.org/locus/YNCP0024C YNCP0024C] ||  || tI(AAU)P2, tRNA-Ile || tRNA gene || 880296..880369 || -
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0001W YNCQ0001W] ||  || tP(UGG)Q, tRNA-Pro || tRNA gene || 731..802 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0002W YNCQ0002W] || 15S_RRNA || Q0020 || rRNA gene || 6546..8194 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0003W YNCQ0003W] ||  || tW(UCA)Q, tRNA-Trp || tRNA gene || 9374..9447 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0004W YNCQ0004W] ||  || tE(UUC)Q, tRNA-Glu || tRNA gene || 35373..35444 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0005W YNCQ0005W] ||  || tS(UGA)Q2, tRNA-Ser || tRNA gene || 48201..48290 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0006W YNCQ0006W] || 21S_RRNA || Q0158 || rRNA gene || 58009..62447 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0007W YNCQ0007W] ||  || tT(UGU)Q1, tRNA-Thr || tRNA gene || 63862..63937 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0008W YNCQ0008W] ||  || tC(GCA)Q, tRNA-Cys || tRNA gene || 64415..64490 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0009W YNCQ0009W] ||  || tH(GUG)Q, tRNA-His || tRNA gene || 64596..64670 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0010W YNCQ0010W] ||  || tL(UAA)Q, tRNA-Leu || tRNA gene || 66095..66179 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0011W YNCQ0011W] ||  || tQ(UUG)Q, tRNA-Gln || tRNA gene || 66210..66285 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0012W YNCQ0012W] ||  || tK(UUU)Q, tRNA-Lys || tRNA gene || 67061..67134 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0013W YNCQ0013W] ||  || tR(UCU)Q1, tRNA-Arg || tRNA gene || 67309..67381 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0014W YNCQ0014W] ||  || tG(UCC)Q, tRNA-Gly || tRNA gene || 67468..67542 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0015W YNCQ0015W] ||  || tD(GUC)Q, tRNA-Asp || tRNA gene || 68322..68396 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0016W YNCQ0016W] ||  || tS(GCU)Q1, tRNA-Ser || tRNA gene || 69203..69288 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0017W YNCQ0017W] ||  || tR(ACG)Q2, tRNA-Arg || tRNA gene || 69289..69362 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0018W YNCQ0018W] ||  || tA(UGC)Q, tRNA-Ala || tRNA gene || 69846..69921 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0019W YNCQ0019W] ||  || tI(GAU)Q, tRNA-Ile || tRNA gene || 70162..70237 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0020W YNCQ0020W] ||  || tY(GUA)Q, tRNA-Tyr || tRNA gene || 70824..70907 || +
 +
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0021W YNCQ0021W] ||  || tN(GUU)Q, tRNA-Asn || tRNA gene || 71433..71503 || +
 
|-
 
|-
−
|
+
| Mito || [https://www.yeastgenome.org/locus/YNCQ0022W YNCQ0022W] ||  || tM(CAU)Q1, tRNA-Met || tRNA gene || 72630..72705 || +
−
|
 
−
|
 
 
|-
 
|-
−
|
+
| Mito || [https://www.yeastgenome.org/locus/YNCQ0023W YNCQ0023W] ||  || tF(GAA)Q, tRNA-Phe || tRNA gene || 77431..77505 || +
−
|
 
−
|
 
 
|-
 
|-
−
|
+
| Mito || [https://www.yeastgenome.org/locus/YNCQ0024C YNCQ0024C] ||  || tT(UAG)Q2, tRNA-Thr || tRNA gene || 78089..78162 || -
−
|
 
−
|
 
 
|-
 
|-
−
|
+
| Mito || [https://www.yeastgenome.org/locus/YNCQ0025W YNCQ0025W] ||  || tV(UAC)Q, tRNA-Val || tRNA gene || 78533..78608 || +
−
|
 
−
|
 
 
|-
 
|-
−
|
+
| Mito || [https://www.yeastgenome.org/locus/YNCQ0026W YNCQ0026W] ||  || tM(CAU)Q2, tRNA-Met || tRNA gene || 85035..85112 || +
−
|
 
−
|
 
 
|-
 
|-
 +
| Mito || [https://www.yeastgenome.org/locus/YNCQ0027W YNCQ0027W] || RPM1 || Q0285 || ncRNA gene || 85295..85777 || +
 +
|}

Latest revision as of 12:51, 27 May 2021

The S. cerevisiae strain S288C reference genome annotation was updated in its first major update since 2014. The new genome annotation is release R64.3.1, dated 2021-04-21. Note that the underlying genome sequence itself was not altered in any way.

R64.3 Annotation update summary

This annotation update included (details in table below):

Various sequence and annotation files are available on SGD's Downloads site.

R64.3 Annotation update details

Chr Feature Description of change Reference
II YNCB0008W aka GAL10-ncRNA New ncRNA antisense to GAL10
  • coordinates 276805..280645
 Houseley et al 2008 PMID:19061643,

Pinskaya et al 2009 PMID:19407817,
Geisler et al 2012 PMID:22226051

II YNCB0014W aka TBRT/XUT_2F-154 New ncRNA antisense to TAT1
  • coordinates 376610..378633
 Awasthi et al 2020 PMID:32081726
III RE/RE301 New recombination enhancer
  • coordinates 29108..29809
 Wu and Haber 1996 PMID:8861911
V YELWdelta27 New Ty1 LTR
  • coordinates 449274..449626
 Nene et al 2018 PMID:29320491
V HPA3/YEL066W Moved translation start to Met19
  • old coordinates: 26667..27206
  • new coordinates: 26721..27206
 Sampath et al 2013 PMID:23775086
VII OTO1/YGR227C-A New ORF
  • coordinates 949052..949225 Crick
 Makanae et al 2015 PMID:25781884
VII ROK1/YGL171W Two new uORFs
  • coordinates uORF1: 182286..182407
  • coordinates uORF2: 182291..182329
 Jeon and Kim 2010 PMID:20969870
VIII YHR052C-B New ORF
  • coordinates: 212519..212692 Crick
 He et al 2018 PMID:29897761
VIII YHR054C-B New ORF
  • coordinates: 214517..214690 Crick
 He et al 2018 PMID:29897761
VIII SUT169/YNCH0011W New ncRNA
  • coordinates 378254..379237
 Xu et al 2009 PMID:19169243,

Geisler et al 2012 PMID:22226051,
Huber et al 2016 PMID:27292640,
Bunina et al 2017 PMID:28977638

X YJR012C Moved start to Met76
  • old coordinates: 459795..460418 Crick
  • new coordinates: 459795..460193 Crick
 Sadhu et al 2018 PMID:29632376
X YJR107C-A New ORF
  • coordinates 628457..628693 Crick
 Yagoub et al 2015 PMID:26554900,
He et al 2018 PMID:29897761
XI YKL104W-A New ORF
  • coordinates 245032..245286
 He et al 2018 PMID:29897761
XII YLR379W-A New ORF
  • coordinates: 877444..877716
 Internal reanalysis of results from Song et al 2015 to find and annotate missing S288C ORFs PMID:25781462
XII NTS1-2, NTS2-1, NTS2-2 Change feature_type/SO_term from SO:0001637 rRNA_gene to SO:0000183 non_transcribed_region
XIII LDO45/YMR147W Shift stop to be same as LDO16/YMR148W, add intron
  • old coordinates 559199..559870
  • new coordinates 559199..559780, 560156..560812
 Eisenberg-Bord et al 2018 PMID:29187527
XIII YMR008C-A New ORF
  • coordinates 283081..283548 Crick
 Internal reanalysis of results from Song et al 2015 to find and annotate missing S288C ORFs PMID:25781462
XIII YNCM0001W aka PHO84 lncRNA New ncRNA
  • coordinates: 23564..26578
 Camblong et al 2007 PMID:18022365
XIV LTO1/YNL260C Move start to Met37
  • old coordinates: 156859..157455 Crick
  • new coordinates: 156859..157347 Crick
 Paul et al 2015 PMID:26182403
XVI YNCP0002W aka GAL4 lncRNA New ncRNA
  • coordinates: 79562..82648
 Geisler et al 2012 PMID:22226051

New systematic nomenclature system for noncoding RNA genes

Chr Systematic_name Gene_name Alias Feature_type Coordinates Strand
I YNCA0001W HRA1 ncRNA gene 99305..99868 +
I YNCA0002W TRN1 tP(UGG)A, tRNA-Pro tRNA gene 139152..139254 +
I YNCA0003W SNR18 snR18 snoRNA gene 142367..142468 +
I YNCA0004W TGA1 tA(UGC)A, tRNA-Ala tRNA gene 166267..166339 +
I YNCA0005W SUP56 tL(CAA)A, tRNA-Leu tRNA gene 181141..181254 +
I YNCA0006C tS(AGA)A, tRNA-Ser tRNA gene 182522..182603 -
II YNCB0001W tL(UAA)B1, tRNA-Leu tRNA gene 9583..9666 +
II YNCB0002W tF(GAA)B, tRNA-Phe tRNA gene 36398..36488 +
II YNCB0003W SNR56 snR56 snoRNA gene 88190..88277 +
II YNCB0004W tI(AAU)B, tRNA-Ile tRNA gene 197494..197567 +
II YNCB0005C tG(GCC)B, tRNA-Gly tRNA gene 197629..197699 -
II YNCB0006W tS(AGA)B, tRNA-Ser tRNA gene 227075..227156 +
II YNCB0007W tT(AGU)B, tRNA-Thr tRNA gene 266378..266450 +
II YNCB0008W GAL10-ncRNA ncRNA gene 276805..280645 +
II YNCB0009C SNR161 snR161 snoRNA gene 307185..307345 -
II YNCB0010W TLC1 telomerase RNA gene 307587..308887 +
II YNCB0011C tV(UAC)B, tRNA-Val tRNA gene 326792..326865 -
II YNCB0012W tL(UAA)B2, tRNA-Leu tRNA gene 347603..347686 +
II YNCB0013W tQ(UUG)B, tRNA-Gln tRNA gene 350827..350898 +
II YNCB0014W TBRT XUT_2F-154 ncRNA gene 376610..378633 +
II YNCB0015W tR(UCU)B, tRNA-Arg tRNA gene 405878..405949 +
II YNCB0016W tD(GUC)B, tRNA-Asp tRNA gene 405960..406031 +
II YNCB0017C tC(GCA)B, tRNA-Cys tRNA gene 643007..643078 -
II YNCB0018W tE(UUC)B, tRNA-Glu tRNA gene 645167..645238 +
II YNCB0019C LSR1 snRNA gene 680688..681862 -
III YNCC0001C tE(UUC)C, tRNA-Glu tRNA gene 82462..82533 -
III YNCC0002W SUP53 tL(CAA)C, tRNA-Leu tRNA gene 90859..90972 +
III YNCC0003C SNR43 snR43 snoRNA gene 107504..107712 -
III YNCC0004C SUF2 tP(AGG)C, tRNA-Pro tRNA gene 123577..123648 -
III YNCC0005W tN(GUU)C, tRNA-Asn tRNA gene 127716..127789 +
III YNCC0006C SNR33 snR33 snoRNA gene 142364..142546 -
III YNCC0007C SUF16 tG(GCC)C, tRNA-Gly tRNA gene 142701..142771 -
III YNCC0008W tM(CAU)C, tRNA-Met tRNA gene 149920..149991 +
III YNCC0009C tK(CUU)C, tRNA-Lys tRNA gene 151284..151356 -
III YNCC0010C tQ(UUG)C, tRNA-Gln tRNA gene 168301..168372 -
III YNCC0011W SNR65 snR65 snoRNA gene 177183..177282 +
III YNCC0012C SNR189 snR189 snoRNA gene 178610..178798 -
III YNCC0013W SUP61 tS(CGA)C, tRNA-Ser tRNA gene 227942..228042 +
III YNCC0014W tT(AGU)C, tRNA-Thr tRNA gene 295484..295556 +
IV YNCD0001W tG(GCC)D1, tRNA-Gly tRNA gene 83548..83618 +
IV YNCD0002C SNR63 snR63 snoRNA gene 323217..323471 -
IV YNCD0003W tK(UUU)D, tRNA-Lys tRNA gene 359577..359672 +
IV YNCD0004W tA(AGC)D, tRNA-Ala tRNA gene 410379..410451 +
IV YNCD0005C tT(AGU)D, tRNA-Thr tRNA gene 434264..434336 -
IV YNCD0006W tS(AGA)D1, tRNA-Ser tRNA gene 437772..437853 +
IV YNCD0007C tV(UAC)D, tRNA-Val tRNA gene 488797..488870 -
IV YNCD0008W tL(UAA)D, tRNA-Leu tRNA gene 519743..519826 +
IV YNCD0009W tQ(UUG)D1, tRNA-Gln tRNA gene 520972..521043 +
IV YNCD0010C SNR47 snR47 snoRNA gene 541602..541700 -
IV YNCD0011W tR(UCU)D, tRNA-Arg tRNA gene 568882..568953 +
IV YNCD0012W tD(GUC)D, tRNA-Asp tRNA gene 568964..569035 +
IV YNCD0013C tR(ACG)D, tRNA-Arg tRNA gene 619969..620041 -
IV YNCD0014C tQ(UUG)D2, tRNA-Gln tRNA gene 645153..645224 -
IV YNCD0015C tI(AAU)D, tRNA-Ile tRNA gene 668007..668080 -
IV YNCD0016C tQ(UUG)D3, tRNA-Gln tRNA gene 802731..802802 -
IV YNCD0017W tI(UAU)D, tRNA-Ile tRNA gene 884361..884493 +
IV YNCD0018W SUP2 tY(GUA)D, tRNA-Tyr tRNA gene 946312..946400 +
IV YNCD0019C tS(AGA)D2, tRNA-Ser tRNA gene 980974..981055 -
IV YNCD0020W tG(GCC)D2, tRNA-Gly tRNA gene 992832..992902 +
IV YNCD0021C tE(CUC)D, tRNA-Glu tRNA gene 1017207..1017278 -
IV YNCD0022C tV(CAC)D, tRNA-Val tRNA gene 1075472..1075544 -
IV YNCD0023C tF(GAA)D, tRNA-Phe tRNA gene 1095370..1095461 -
IV YNCD0024C tX(XXX)D tRNA gene 1150842..1150941 -
IV YNCD0025W EMT1 tM(CAU)D, tRNA-Met tRNA gene 1175829..1175901 +
IV YNCD0026W tK(CUU)D1, tRNA-Lys tRNA gene 1201750..1201822 +
IV YNCD0027C SUF3 tG(CCC)D, tRNA-Gly tRNA gene 1257008..1257079 -
IV YNCD0028W tS(AGA)D3, tRNA-Ser tRNA gene 1305630..1305712 +
IV YNCD0029C tK(CUU)D2, tRNA-Lys tRNA gene 1352466..1352538 -
IV YNCD0030W SNR13 snR13 snoRNA gene 1402919..1403042 +
IV YNCD0031C tL(CAA)D, tRNA-Leu tRNA gene 1461715..1461829 -
IV YNCD0032C SNR84 snR84 snoRNA gene 1492477..1493026 -
V YNCE0001C SNR80 snR80 snoRNA gene 52150..52320 -
V YNCE0002W SNR67 snR67 snoRNA gene 61352..61433 +
V YNCE0003W SNR53 snR53 snoRNA gene 61699..61789 +
V YNCE0004C tG(GCC)E, tRNA-Gly tRNA gene 61890..61960 -
V YNCE0005W tS(AGA)E, tRNA-Ser tRNA gene 86604..86685 +
V YNCE0006W IMT4 tM(CAU)E, tRNA-Met tRNA gene 100133..100204 +
V YNCE0007C RPR1 ncRNA gene 117667..118035 -
V YNCE0008C tQ(UUG)E2, tRNA-Gln tRNA gene 131082..131153 -
V YNCE0009C tK(CUU)E1, tRNA-Lys tRNA gene 135425..135497 -
V YNCE0010W tR(UCU)E, tRNA-Arg tRNA gene 138666..138737 +
V YNCE0011C SNR14 snR14 snRNA gene 167427..167586 -
V YNCE0012W tE(UUC)E1, tRNA-Glu tRNA gene 177099..177170 +
V YNCE0013W tH(GUG)E1, tRNA-His tRNA gene 207357..207428 +
V YNCE0014W tQ(UUG)E1, tRNA-Gln tRNA gene 250286..250357 +
V YNCE0015C SUP19 tS(UGA)E, tRNA-Ser tRNA gene 288443..288524 -
V YNCE0016C tA(UGC)E, tRNA-Ala tRNA gene 312023..312095 -
V YNCE0017W SRG1 ncRNA gene 322212..322762 +
V YNCE0018W tE(UUC)E2, tRNA-Glu tRNA gene 354934..355005 +
V YNCE0019W SNR4 snR4 snoRNA gene 424698..424883 +
V YNCE0020C SNR52 snR52 snoRNA gene 431129..431220 -
V YNCE0021C tH(GUG)E2, tRNA-His tRNA gene 434541..434612 -
V YNCE0022C tK(CUU)E2, tRNA-Lys tRNA gene 435752..435824 -
V YNCE0023W tV(AAC)E1, tRNA-Val tRNA gene 438700..438773 +
V YNCE0024W SCR1 ncRNA gene 441987..442508 +
V YNCE0025C tI(AAU)E1, tRNA-Ile tRNA gene 443202..443275 -
V YNCE0026W tV(AAC)E2, tRNA-Val tRNA gene 469457..469530 +
V YNCE0027C tE(UUC)E3, tRNA-Glu tRNA gene 487331..487402 -
V YNCE0028C tR(ACG)E, tRNA-Arg tRNA gene 492352..492424 -
V YNCE0029C tI(AAU)E2, tRNA-Ile tRNA gene 551285..551358 -
VI YNCF0001C RUF21 ncRNA gene 57815..58521 -
VI YNCF0002W SUF9 tP(UGG)F, tRNA-Pro tRNA gene 101376..101478 +
VI YNCF0003C RUF20 ncRNA gene 131061..131503 -
VI YNCF0004C tN(GUU)F, tRNA-Asn tRNA gene 137486..137559 -
VI YNCF0005C tF(GAA)F, tRNA-Phe tRNA gene 157916..158007 -
VI YNCF0006W SUF20 tG(GCC)F1, tRNA-Gly tRNA gene 162228..162298 +
VI YNCF0007W SUP11 tY(GUA)F1, tRNA-Tyr tRNA gene 167437..167525 +
VI YNCF0008C tG(GCC)F2, tRNA-Gly tRNA gene 180974..181044 -
VI YNCF0009C tS(GCU)F, tRNA-Ser tRNA gene 191513..191613 -
VI YNCF0010C RUF22 ncRNA gene 199299..199813 -
VI YNCF0011C tA(AGC)F, tRNA-Ala tRNA gene 204924..204996 -
VI YNCF0012C SUP6 tY(GUA)F2, tRNA-Tyr tRNA gene 210619..210707 -
VI YNCF0013W RUF23 ncRNA gene 221714..221967 +
VI YNCF0014C tK(CUU)F, tRNA-Lys tRNA gene 226688..226760 -
VII YNCG0001C RME3 ncRNA gene 33109..35013 -
VII YNCG0002C tV(AAC)G3, tRNA-Val tRNA gene 73829..73902 -
VII YNCG0003C tH(GUG)G1, tRNA-His tRNA gene 110625..110696 -
VII YNCG0004W tK(UUU)G1, tRNA-Lys tRNA gene 115488..115583 +
VII YNCG0005W tK(CUU)G1, tRNA-Lys tRNA gene 122269..122341 +
VII YNCG0006C RME2 ncRNA gene 141898..144120 -
VII YNCG0007C tK(CUU)G2, tRNA-Lys tRNA gene 185714..185786 -
VII YNCG0008W tL(CAA)G1, tRNA-Leu tRNA gene 205521..205634 +
VII YNCG0009C tW(CCA)G1, tRNA-Trp tRNA gene 287350..287455 -
VII YNCG0010W SNR82 snR82 snoRNA gene 316788..317055 +
VII YNCG0011W tH(GUG)G2, tRNA-His tRNA gene 319781..319852 +
VII YNCG0012W SOE1 tE(UUC)G1, tRNA-Glu tRNA gene 328583..328654 +
VII YNCG0013W SNR10 snR10 snoRNA gene 345986..346230 +
VII YNCG0014C SNR39 snR39 snoRNA gene 365163..365251 -
VII YNCG0015C SNR39B snR39B snoRNA gene 366374..366469 -
VII YNCG0016C tE(UUC)G2, tRNA-Glu tRNA gene 401527..401598 -
VII YNCG0017W tR(UCU)G1, tRNA-Arg tRNA gene 405470..405541 +
VII YNCG0018C tV(AAC)G1, tRNA-Val tRNA gene 412294..412367 -
VII YNCG0019W SUP54 tL(CAA)G2, tRNA-Leu tRNA gene 423092..423205 +
VII YNCG0020C tF(GAA)G, tRNA-Phe tRNA gene 440716..440807 -
VII YNCG0021W tD(GUC)G1, tRNA-Asp tRNA gene 531610..531681 +
VII YNCG0022W tE(UUC)G3, tRNA-Glu tRNA gene 541850..541921 +
VII YNCG0023C tD(GUC)G2, tRNA-Asp tRNA gene 544577..544648 -
VII YNCG0024W SNR46 snR46 snoRNA gene 545370..545566 +
VII YNCG0025C tS(AGA)G, tRNA-Ser tRNA gene 561662..561743 -
VII YNCG0026W SNR48 snR48 snoRNA gene 609584..609696 +
VII YNCG0027W tT(UGU)G1, tRNA-Thr tRNA gene 661749..661820 +
VII YNCG0028W tL(GAG)G, tRNA-Leu tRNA gene 700675..700756 +
VII YNCG0029C tK(UUU)G2, tRNA-Lys tRNA gene 700953..701048 -
VII YNCG0030C tC(GCA)G, tRNA-Cys tRNA gene 707108..707179 -
VII YNCG0031W tN(GUU)G, tRNA-Asn tRNA gene 731137..731210 +
VII YNCG0032W tR(UCU)G3, tRNA-Arg tRNA gene 736340..736411 +
VII YNCG0033W tI(AAU)G, tRNA-Ile tRNA gene 739122..739195 +
VII YNCG0034W tA(AGC)G, tRNA-Ala tRNA gene 774349..774421 +
VII YNCG0035W SUF4 tG(UCC)G, tRNA-Gly tRNA gene 779616..779687 +
VII YNCG0036W tA(UGC)G, tRNA-Ala tRNA gene 794417..794489 +
VII YNCG0037W tV(AAC)G2, tRNA-Val tRNA gene 823482..823555 +
VII YNCG0038C tR(UCU)G2, tRNA-Arg tRNA gene 828723..828794 -
VII YNCG0039W tG(GCC)G1, tRNA-Gly tRNA gene 845649..845719 +
VII YNCG0040C tL(CAA)G3, tRNA-Leu tRNA gene 857378..857491 -
VII YNCG0041W tK(CUU)G3, tRNA-Lys tRNA gene 876394..876466 +
VII YNCG0042C tW(CCA)G2, tRNA-Trp tRNA gene 878710..878815 -
VII YNCG0043C tG(GCC)G2, tRNA-Gly tRNA gene 930953..931023 -
VII YNCG0044C SNR7-L snR7-L snRNA gene 939459..939672 -
VII YNCG0045C SNR7-S snR7-S snRNA gene 939494..939672 -
VII YNCG0046W tT(UGU)G2, tRNA-Thr tRNA gene 1004216..1004287 +
VIII YNCH0001W tH(GUG)H, tRNA-His tRNA gene 62755..62826 +
VIII YNCH0002C tV(AAC)H, tRNA-Val tRNA gene 85298..85371 -
VIII YNCH0003C tT(AGU)H, tRNA-Thr tRNA gene 116107..116179 -
VIII YNCH0004C tS(AGA)H, tRNA-Ser tRNA gene 133026..133107 -
VIII YNCH0005W tQ(UUG)H, tRNA-Gln tRNA gene 134321..134392 +
VIII YNCH0006C tA(AGC)H, tRNA-Ala tRNA gene 146242..146314 -
VIII YNCH0007W RUF5-1 ncRNA gene 212409..213118 +
VIII YNCH0008W RUF5-2 ncRNA gene 214407..215116 +
VIII YNCH0009C tF(GAA)H1, tRNA-Phe tRNA gene 237848..237939 -
VIII YNCH0010C tF(GAA)H2, tRNA-Phe tRNA gene 358478..358569 -
VIII YNCH0011W SUT169 ncRNA gene 378254..379237 +
VIII YNCH0012W SNR32 snR32 snoRNA gene 381540..381727 +
VIII YNCH0013C SUF8 tP(UGG)H, tRNA-Pro tRNA gene 388893..388995 -
VIII YNCH0014W SNR71 snR71 snoRNA gene 411228..411317 +
VIII YNCH0015W tT(UGU)H, tRNA-Thr tRNA gene 466990..467061 +
VIII YNCH0016C tV(CAC)H, tRNA-Val tRNA gene 475706..475778 -
IX YNCI0001W SNR68 snR68 snoRNA gene 97111..97246 +
IX YNCI0002W tT(AGU)I1, tRNA-Thr tRNA gene 175031..175103 +
IX YNCI0003C tI(AAU)I1, tRNA-Ile tRNA gene 183440..183513 -
IX YNCI0004W tE(CUC)I, tRNA-Glu tRNA gene 197592..197663 +
IX YNCI0005W tI(AAU)I2, tRNA-Ile tRNA gene 210665..210738 +
IX YNCI0006W SUP17 tS(UGA)I, tRNA-Ser tRNA gene 248850..248931 +
IX YNCI0007C tK(CUU)I, tRNA-Lys tRNA gene 300228..300300 -
IX YNCI0008C tD(GUC)I1, tRNA-Asp tRNA gene 324303..324374 -
IX YNCI0009W tT(AGU)I2, tRNA-Thr tRNA gene 325748..325820 +
IX YNCI0010C tD(GUC)I2, tRNA-Asp tRNA gene 336349..336420 -
IX YNCI0011W tE(UUC)I, tRNA-Glu tRNA gene 370417..370488 +
IX YNCI0012 ICR1 ncRNA gene 393884..397082 -
IX YNCI0013W PWR1 ncRNA gene 395999..396939 +
X YNCJ0001C tT(AGU)J, tRNA-Thr tRNA gene 59100..59172 -
X YNCJ0002C tE(UUC)J, tRNA-Glu tRNA gene 115939..116010 -
X YNCJ0003C SNR128 snR128 snoRNA gene 139566..139691 -
X YNCJ0004C SNR190 snR190 snoRNA gene 139761..139950 -
X YNCJ0005C tA(AGC)J, tRNA-Ala tRNA gene 197313..197385 -
X YNCJ0006W tD(GUC)J1, tRNA-Asp tRNA gene 204735..204806 +
X YNCJ0007C SNR37 snR37 snoRNA gene 228094..228479 -
X YNCJ0008W tR(ACG)J, tRNA-Arg tRNA gene 233939..234011 +
X YNCJ0009C SNR60 snR60 snoRNA gene 349130..349233 -
X YNCJ0010W SUP7 tY(GUA)J1, tRNA-Tyr tRNA gene 354244..354332 +
X YNCJ0011W tR(UCU)J1, tRNA-Arg tRNA gene 355374..355445 +
X YNCJ0012W tD(GUC)J2, tRNA-Asp tRNA gene 355456..355527 +
X YNCJ0013C tD(GUC)J3, tRNA-Asp tRNA gene 374424..374495 -
X YNCJ0014C tR(UCU)J2, tRNA-Arg tRNA gene 374506..374577 -
X YNCJ0015W tV(AAC)J, tRNA-Val tRNA gene 378360..378433 +
X YNCJ0016C EMT5 tM(CAU)J1, tRNA-Met tRNA gene 391043..391115 -
X YNCJ0017C tG(GCC)J1, tRNA-Gly tRNA gene 396726..396796 -
X YNCJ0018W tK(CUU)J, tRNA-Lys tRNA gene 414966..415038 +
X YNCJ0019C tW(CCA)J, tRNA-Trp tRNA gene 415931..416036 -
X YNCJ0020W EMT3 tM(CAU)J2, tRNA-Met tRNA gene 422937..423009 +
X YNCJ0021C SUP51 tL(UAA)J, tRNA-Leu tRNA gene 424432..424515 -
X YNCJ0022C IMT3 tM(CAU)J3, tRNA-Met tRNA gene 517813..517884 -
X YNCJ0023C tS(AGA)J, tRNA-Ser tRNA gene 524012..524093 -
X YNCJ0024W SUF23 tG(GCC)J2, tRNA-Gly tRNA gene 531828..531898 +
X YNCJ0025W HSX1 tR(CCU)J, tRNA-Arg tRNA gene 538555..538626 +
X YNCJ0026W tD(GUC)J4, tRNA-Asp tRNA gene 541508..541579 +
X YNCJ0027C SUP4 tY(GUA)J2, tRNA-Tyr tRNA gene 542956..543044 -
X YNCJ0028C IRT1 ncRNA gene 605936..607424 -
X YNCJ0029W tL(UAG)J, tRNA-Leu tRNA gene 617919..618019 +
X YNCJ0030W SNR3 snR3 snoRNA gene 663749..663942 +
XI YNCK0001W SNR64 snR64 snoRNA gene 38811..38911 +
XI YNCK0002C TRT2 tT(CGU)K, tRNA-Thr tRNA gene 46735..46806 -
XI YNCK0003W tN(GUU)K, tRNA-Asn tRNA gene 74624..74697 +
XI YNCK0004W tL(UAA)K, tRNA-Leu tRNA gene 84208..84291 +
XI YNCK0005C tE(UUC)K, tRNA-Glu tRNA gene 141018..141089 -
XI YNCK0006C tR(UCU)K, tRNA-Arg tRNA gene 162487..162558 -
XI YNCK0007W tK(CUU)K, tRNA-Lys tRNA gene 202999..203071 +
XI YNCK0008W tA(AGC)K1, tRNA-Ala tRNA gene 219895..219967 +
XI YNCK0009W SNR38 snR38 snoRNA gene 283185..283279 +
XI YNCK0010W tW(CCA)K, tRNA-Trp tRNA gene 302918..303023 +
XI YNCK0011C tV(AAC)K1, tRNA-Val tRNA gene 308144..308217 -
XI YNCK0012C tH(GUG)K, tRNA-His tRNA gene 313401..313472 -
XI YNCK0013W SNR69 snR69 snoRNA gene 364776..364876 +
XI YNCK0014W tV(AAC)K2, tRNA-Val tRNA gene 379680..379753 +
XI YNCK0015C SNR87 snR87 snoRNA gene 431030..431138 -
XI YNCK0016W tL(CAA)K, tRNA-Leu tRNA gene 458557..458670 +
XI YNCK0017W tR(ACG)K, tRNA-Arg tRNA gene 490968..491040 +
XI YNCK0018C tD(GUC)K, tRNA-Asp tRNA gene 513332..513403 -
XI YNCK0019W tA(AGC)K2, tRNA-Ala tRNA gene 517988..518060 +
XI YNCK0020C SNR42 snR42 snoRNA gene 559016..559366 -
XI YNCK0021W tK(UUU)K, tRNA-Lys tRNA gene 578965..579060 +
XII YNCL0001W tP(UGG)L, tRNA-Pro tRNA gene 92548..92650 +
XII YNCL0002C tS(AGA)L, tRNA-Ser tRNA gene 167944..168025 -
XII YNCL0003W SNR30 snR30 snoRNA gene 198784..199389 +
XII YNCL0004C tA(UGC)L, tRNA-Ala tRNA gene 214883..214955 -
XII YNCL0005C SNR79 snR79 snoRNA gene 348427..348510 -
XII YNCL0006W SNR6 snR6 snRNA gene 366235..366346 +
XII YNCL0007W tR(ACG)L, tRNA-Arg tRNA gene 374355..374427 +
XII YNCL0008W tD(GUC)L1, tRNA-Asp tRNA gene 427132..427203 +
XII YNCL0009C tQ(UUG)L, tRNA-Gln tRNA gene 448650..448721 -
XII YNCL0010C RDN37-1 rRNA gene 451575..458432 -
XII YNCL0011C ETS2-1 rRNA gene 451575..451785 -
XII YNCL0012C RDN25-1 rRNA gene 451786..455181 -
XII YNCL0013C ITS2-1 rRNA gene 455182..455413 -
XII YNCL0014C RDN58-1 rRNA gene 455414..455571 -
XII YNCL0015C ITS1-1 rRNA gene 455572..455932 -
XII YNCL0016C RDN18-1 rRNA gene 455933..457732 -
XII YNCL0017C ETS1-1 rRNA gene 457733..458432 -
XII YNCL0018W RDN5-1 rRNA gene 459676..459796 +
XII YNCL0019C ETS2-2 rRNA gene 460712..460922 -
XII YNCL0020C RDN37-2 rRNA gene 460712..467569 -
XII YNCL0021C RDN25-2 rRNA gene 460923..464318 -
XII YNCL0022C ITS2-2 rRNA gene 464319..464550 -
XII YNCL0023C RDN58-2 rRNA gene 464551..464708 -
XII YNCL0024C ITS1-2 rRNA gene 464709..465069 -
XII YNCL0025C RDN18-2 rRNA gene 465070..466869 -
XII YNCL0026C ETS1-2 rRNA gene 466870..467569 -
XII YNCL0027W RDN5-2 rRNA gene 468813..468931 +
XII YNCL0028W RDN5-3 rRNA gene 472465..472583 +
XII YNCL0029W RDN5-4 rRNA gene 482045..482163 +
XII YNCL0030W RDN5-5 rRNA gene 485697..485815 +
XII YNCL0031W RDN5-6 rRNA gene 489349..489469 +
XII YNCL0032C tL(UAG)L1, tRNA-Leu tRNA gene 592519..592619 -
XII YNCL0033C tI(UAU)L, tRNA-Ile tRNA gene 605300..605432 -
XII YNCL0034W tL(CAA)L, tRNA-Leu tRNA gene 628383..628497 +
XII YNCL0035C tA(AGC)L, tRNA-Ala tRNA gene 656934..657006 -
XII YNCL0036C tV(AAC)L, tRNA-Val tRNA gene 687859..687932 -
XII YNCL0037W tL(UAG)L2, tRNA-Leu tRNA gene 732090..732190 +
XII YNCL0038W tI(AAU)L1, tRNA-Ile tRNA gene 734802..734875 +
XII YNCL0039W tX(XXX)L tRNA gene 784354..784453 +
XII YNCL0040W tD(GUC)L2, tRNA-Asp tRNA gene 793918..793989 +
XII YNCL0041C SNR61 snR61 snoRNA gene 794486..794575 -
XII YNCL0042C SNR55 snR55 snoRNA gene 794697..794794 -
XII YNCL0043C SNR57 snR57 snoRNA gene 794937..795024 -
XII YNCL0044W tE(UUC)L, tRNA-Glu tRNA gene 797178..797249 +
XII YNCL0045W TRR4 tR(CCG)L, tRNA-Arg tRNA gene 818609..818680 +
XII YNCL0046W SNR44 snR44 snoRNA gene 856710..856920 +
XII YNCL0047W tK(UUU)L, tRNA-Lys tRNA gene 875376..875471 +
XII YNCL0048W SNR34 snR34 snoRNA gene 899180..899382 +
XII YNCL0049C tL(UAA)L, tRNA-Leu tRNA gene 962972..963055 -
XII YNCL0050C tN(GUU)L, tRNA-Asn tRNA gene 975983..976056 -
XII YNCL0051C tI(AAU)L2, tRNA-Ile tRNA gene 1052071..1052144 -
XIII YNCM0001W PHO84 lncRNA ncRNA gene 23564..26578 +
XIII YNCM0002C SNR85 snR85 snoRNA gene 67768..67938 -
XIII YNCM0003W ZOD1 ncRNA gene 91970..92027 +
XIII YNCM0004C tR(UCU)M2, tRNA-Arg tRNA gene 131825..131896 -
XIII YNCM0005C SNR54 snR54 snoRNA gene 163535..163620 -
XIII YNCM0006W SUP5 tY(GUA)M1, tRNA-Tyr tRNA gene 168795..168883 +
XIII YNCM0007C tG(GCC)M, tRNA-Gly tRNA gene 183898..183968 -
XIII YNCM0008C SUF7 tP(UGG)M, tRNA-Pro tRNA gene 196068..196170 -
XIII YNCM0009C tS(AGA)M, tRNA-Ser tRNA gene 259158..259239 -
XIII YNCM0010W tE(UUC)M, tRNA-Glu tRNA gene 290801..290872 +
XIII YNCM0011W SNR78 snR78 snoRNA gene 297278..297364 +
XIII YNCM0012W SNR77 snR77 snoRNA gene 297506..297593 +
XIII YNCM0013W SNR76 snR76 snoRNA gene 297725..297833 +
XIII YNCM0014W SNR75 snR75 snoRNA gene 297918..298006 +
XIII YNCM0015W SNR74 snR74 snoRNA gene 298138..298225 +
XIII YNCM0016W SNR73 snR73 snoRNA gene 298307..298412 +
XIII YNCM0017W SNR72 snR72 snoRNA gene 298554..298651 +
XIII YNCM0018C tA(AGC)M1, tRNA-Ala tRNA gene 321147..321219 -
XIII YNCM0019W tF(GAA)M, tRNA-Phe tRNA gene 352280..352370 +
XIII YNCM0020W tH(GUG)M, tRNA-His tRNA gene 363064..363135 +
XIII YNCM0021C tV(AAC)M1, tRNA-Val tRNA gene 372445..372518 -
XIII YNCM0022C tW(CCA)M, tRNA-Trp tRNA gene 379303..379408 -
XIII YNCM0023C tV(AAC)M2, tRNA-Val tRNA gene 420588..420661 -
XIII YNCM0024W tD(GUC)M, tRNA-Asp tRNA gene 463554..463625 +
XIII YNCM0025C tK(CUU)M, tRNA-Lys tRNA gene 480621..480693 -
XIII YNCM0026C SNR24 snR24 snoRNA gene 499984..500072 -
XIII YNCM0027W tL(CAA)M, tRNA-Leu tRNA gene 504895..505008 +
XIII YNCM0028C EMT4 tM(CAU)M, tRNA-Met tRNA gene 572883..572955 -
XIII YNCM0029C tV(AAC)M3, tRNA-Val tRNA gene 586636..586709 -
XIII YNCM0030W SNR83 snR83 snoRNA gene 626349..626654 +
XIII YNCM0031W SNR11 snR11 snoRNA gene 652275..652532 +
XIII YNCM0032C RNA170 ncRNA gene 667288..667456 -
XIII YNCM0033C tR(UCU)M1, tRNA-Arg tRNA gene 747892..747963 -
XIII YNCM0034C SNR86 snR86 snoRNA gene 762110..763113 -
XIII YNCM0035C tA(AGC)M2, tRNA-Ala tRNA gene 768369..768441 -
XIII YNCM0036C CDC65 tQ(CUG)M, tRNA-Gln tRNA gene 808246..808317 -
XIII YNCM0037W SUP8 tY(GUA)M2, tRNA-Tyr tRNA gene 837928..838016 +
XIV YNCN0001W SNR40 snR40 snoRNA gene 89210..89306 +
XIV YNCN0002C SUF6 tG(UCC)N, tRNA-Gly tRNA gene 96241..96312 -
XIV YNCN0003W tN(GUU)N1, tRNA-Asn tRNA gene 102716..102789 +
XIV YNCN0004W tT(AGU)N1, tRNA-Thr tRNA gene 104805..104877 +
XIV YNCN0005C SNR19 snR19 snRNA gene 230105..230672 -
XIV YNCN0006W tF(GAA)N, tRNA-Phe tRNA gene 374869..374959 +
XIV YNCN0007W tL(CAA)N, tRNA-Leu tRNA gene 443006..443119 +
XIV YNCN0008C tD(GUC)N, tRNA-Asp tRNA gene 519099..519169 -
XIV YNCN0009W tP(UGG)N1, tRNA-Pro tRNA gene 547094..547196 +
XIV YNCN0010C tT(AGU)N2, tRNA-Thr tRNA gene 560693..560765 -
XIV YNCN0011W tP(UGG)N2, tRNA-Pro tRNA gene 568115..568217 +
XIV YNCN0012C tI(AAU)N1, tRNA-Ile tRNA gene 569867..569940 -
XIV YNCN0013W NME1 snoRNA gene 585587..585926 +
XIV YNCN0014W SNR66 snR66 snoRNA gene 586090..586175 +
XIV YNCN0015W tI(AAU)N2, tRNA-Ile tRNA gene 602312..602385 +
XIV YNCN0016C SUF10 tP(AGG)N, tRNA-Pro tRNA gene 631846..631917 -
XIV YNCN0017W tN(GUU)N2, tRNA-Asn tRNA gene 632599..632672 +
XIV YNCN0018W SNR49 snR49 snoRNA gene 716120..716284 +
XIV YNCN0019C SNR191 snR191 snoRNA gene 721938..722211 -
XIV YNCN0020C tL(UAA)N, tRNA-Leu tRNA gene 726134..726217 -
XV YNCO0001C SUF1 tG(UCC)O, tRNA-Gly tRNA gene 110962..111033 -
XV YNCO0002W tT(AGU)O1, tRNA-Thr tRNA gene 113802..113874 +
XV YNCO0003C SNR58 snR58 snoRNA gene 136088..136183 -
XV YNCO0004C tG(GCC)O1, tRNA-Gly tRNA gene 226611..226681 -
XV YNCO0005W tN(GUU)O1, tRNA-Asn tRNA gene 228331..228404 +
XV YNCO0006W SNR81 snR81 snoRNA gene 234346..234546 +
XV YNCO0007W SNR50 snR50 snoRNA gene 259489..259578 +
XV YNCO0008W tS(GCU)O, tRNA-Ser tRNA gene 274673..274773 +
XV YNCO0009W SUF17 tG(GCC)O2, tRNA-Gly tRNA gene 282164..282234 +
XV YNCO0010W SUP3 tY(GUA)O, tRNA-Tyr tRNA gene 288192..288280 +
XV YNCO0011W tP(UGG)O1, tRNA-Pro tRNA gene 301097..301198 +
XV YNCO0012C tR(ACG)O, tRNA-ARg tRNA gene 340299..340371 -
XV YNCO0013C tT(AGU)O2, tRNA-Thr tRNA gene 354041..354113 -
XV YNCO0014C SNR9 snR9 snoRNA gene 407948..408134 -
XV YNCO0015C SNR62 snR62 snoRNA gene 409765..409864 -
XV YNCO0016W tK(UUU)O, tRNA-Lys tRNA gene 438643..438738 +
XV YNCO0017W SUF11 tP(UGG)O2, tRNA-Pro tRNA gene 464450..464551 +
XV YNCO0018W tN(GUU)O2, tRNA-Asn tRNA gene 487439..487512 +
XV YNCO0019W tD(GUC)O, tRNA-Asp tRNA gene 571958..572029 +
XV YNCO0020C SUF5 tG(CCC)O tRNA gene 594354..594425 -
XV YNCO0021C tV(AAC)O tRNA gene 663812..663885 -
XV YNCO0022C SNR36 snR36 snoRNA gene 680685..680866 -
XV YNCO0023W IMT1 tM(CAU)O1, tRNA-Met tRNA gene 710201..710272 +
XV YNCO0024C SNR35 snR35 snoRNA gene 759326..759529 -
XV YNCO0025W SNR17A snR17a snoRNA gene 780107..780596 +
XV YNCO0026W SNR8 snR8 snoRNA gene 832332..832521 +
XV YNCO0027C SNR31 snR31 snoRNA gene 841958..842182 -
XV YNCO0028W SNR5 snR5 snoRNA gene 842403..842606 +
XV YNCO0029C tA(UGC)O, tRNA-Ala tRNA gene 854187..854259 -
XV YNCO0030W EMT2 tM(CAU)O2, tRNA-Met tRNA gene 976421..976493 +
XV YNCO0031W tP(UGG)O3, tRNA-Pro tRNA gene 980683..980787 +
XVI YNCP0001C tW(CCA)P, tRNA-Trp tRNA gene 56169..56274 -
XVI YNCP0002W GAL4 lncRNA ncRNA gene 79562..82648 +
XVI YNCP0003W SNR59 snR59 snoRNA gene 173827..173904 +
XVI YNCP0004C tE(UUC)P, tRNA-Glu tRNA gene 210192..210263 -
XVI YNCP0005C SNR17B snR17b snoRNA gene 281056..281517 -
XVI YNCP0006C IMT2 tM(CAU)P, tRNA-Met tRNA gene 338848..338919 -
XVI YNCP0007C tC(GCA)P1, tRNA-Cys tRNA gene 435893..435964 -
XVI YNCP0008C tF(GAA)P1, tRNA-Phe tRNA gene 560198..560289 -
XVI YNCP0009W tG(GCC)P1, tRNA-Gly tRNA gene 572269..572339 +
XVI YNCP0010W tK(CUU)P, tRNA-Lys tRNA gene 582062..582134 +
XVI YNCP0011C tF(GAA)P2, tRNA-Phe tRNA gene 622540..622631 -
XVI YNCP0012W SUP16 tS(UGA)P, tRNA-Ser tRNA gene 689565..689646 +
XVI YNCP0013C SNR51 snR51 snoRNA gene 718700..718806 -
XVI YNCP0014C SNR70 snR70 snoRNA gene 718887..719050 -
XVI YNCP0015C SNR41 snR41 snoRNA gene 719148..719242 -
XVI YNCP0016W tT(UGU)P, tRNA-Thr tRNA gene 744284..744355 +
XVI YNCP0017C tK(UUU)P, tRNA-Lys tRNA gene 769207..769302 -
XVI YNCP0018C tC(GCA)P2, tRNA-Cys tRNA gene 775765..775836 -
XVI YNCP0019W tN(GUU)P, tRNA-Asn tRNA gene 810676..810749 +
XVI YNCP0020W tI(AAU)P1, tRNA-Ile tRNA gene 819529..819602 +
XVI YNCP0021W SNR45 snR45 snoRNA gene 821732..821903 +
XVI YNCP0022W tA(AGC)P, tRNA-Ala tRNA gene 856902..856974 +
XVI YNCP0023W tG(GCC)P2, tRNA-Gly tRNA gene 860379..860449 +
XVI YNCP0024C tI(AAU)P2, tRNA-Ile tRNA gene 880296..880369 -
Mito YNCQ0001W tP(UGG)Q, tRNA-Pro tRNA gene 731..802 +
Mito YNCQ0002W 15S_RRNA Q0020 rRNA gene 6546..8194 +
Mito YNCQ0003W tW(UCA)Q, tRNA-Trp tRNA gene 9374..9447 +
Mito YNCQ0004W tE(UUC)Q, tRNA-Glu tRNA gene 35373..35444 +
Mito YNCQ0005W tS(UGA)Q2, tRNA-Ser tRNA gene 48201..48290 +
Mito YNCQ0006W 21S_RRNA Q0158 rRNA gene 58009..62447 +
Mito YNCQ0007W tT(UGU)Q1, tRNA-Thr tRNA gene 63862..63937 +
Mito YNCQ0008W tC(GCA)Q, tRNA-Cys tRNA gene 64415..64490 +
Mito YNCQ0009W tH(GUG)Q, tRNA-His tRNA gene 64596..64670 +
Mito YNCQ0010W tL(UAA)Q, tRNA-Leu tRNA gene 66095..66179 +
Mito YNCQ0011W tQ(UUG)Q, tRNA-Gln tRNA gene 66210..66285 +
Mito YNCQ0012W tK(UUU)Q, tRNA-Lys tRNA gene 67061..67134 +
Mito YNCQ0013W tR(UCU)Q1, tRNA-Arg tRNA gene 67309..67381 +
Mito YNCQ0014W tG(UCC)Q, tRNA-Gly tRNA gene 67468..67542 +
Mito YNCQ0015W tD(GUC)Q, tRNA-Asp tRNA gene 68322..68396 +
Mito YNCQ0016W tS(GCU)Q1, tRNA-Ser tRNA gene 69203..69288 +
Mito YNCQ0017W tR(ACG)Q2, tRNA-Arg tRNA gene 69289..69362 +
Mito YNCQ0018W tA(UGC)Q, tRNA-Ala tRNA gene 69846..69921 +
Mito YNCQ0019W tI(GAU)Q, tRNA-Ile tRNA gene 70162..70237 +
Mito YNCQ0020W tY(GUA)Q, tRNA-Tyr tRNA gene 70824..70907 +
Mito YNCQ0021W tN(GUU)Q, tRNA-Asn tRNA gene 71433..71503 +
Mito YNCQ0022W tM(CAU)Q1, tRNA-Met tRNA gene 72630..72705 +
Mito YNCQ0023W tF(GAA)Q, tRNA-Phe tRNA gene 77431..77505 +
Mito YNCQ0024C tT(UAG)Q2, tRNA-Thr tRNA gene 78089..78162 -
Mito YNCQ0025W tV(UAC)Q, tRNA-Val tRNA gene 78533..78608 +
Mito YNCQ0026W tM(CAU)Q2, tRNA-Met tRNA gene 85035..85112 +
Mito YNCQ0027W RPM1 Q0285 ncRNA gene 85295..85777 +
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