Difference between revisions of "STA1"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=STA1 STA1]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000029522 STA1]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''STA1 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''STA1 ''
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''          ||''DEX2, MAL5''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Aliases'''          ||''DEX2, MAL5''
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''          || not physically mapped[[Category:not physically mapped]]
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Feature type'''          || not in systematic sequence of S288C[[Category:not in systematic sequence of S288C]]
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|nowrap| Chr IX:..
 
|nowrap| Chr IX:..
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000029522
 
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'''Description of {{PAGENAME}}:'''
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'''Description of STA1:''' Glucoamylase (glucan 1,4-alpha-glucosidase)<ref name='S000051948'>Yamashita I, et al. (1985) Polymorphic extracellular glucoamylase genes and their evolutionary origin in the yeast Saccharomyces diastaticus. J Bacteriol 161(2):574-82
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{{SGDpaper|S000051948}} PMID 3918018</ref>
 
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==Community Commentary==
 
==Community Commentary==
 
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=== Interactions ===
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[[Category:Topic:Interactions]]
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==== Regulatory ====
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[[Category:Topic:Interactions:Regulatory]]
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STA1 is regulated by Nrg1. [[Category:Regulated by Nrg1]]Regulatory interaction with Nrg1 [[Category:Regulatory Interactions with Nrg1]]<br>
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Nrg1 binds to the promoter of STA1, where it represses transcription of this gene. <ref name='S000053650'>Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 {{SGDpaper|S000053650}} PMID 10022891</ref> <ref name = 'CAset6176-2003-02-12'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=6176 Valmik K. Vyas] on 2003-02-12</ref>
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=== Protein Details ===
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[[Category:Topic:Protein Details]]
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==== Nucleic Acid Binding ====
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[[Category:Topic:Protein Details:Nucleic Acid Binding]]
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Nrg1 specifically binds to two regions in the upstream activation sequence of the STA1 gene, as judged by gel retardation and DNase I footprinting analyses. <ref name='S000053650'>Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 {{SGDpaper|S000053650}} PMID 10022891</ref> <ref name = 'CAset6176-2003-02-12'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=6176 Valmik K. Vyas] on 2003-02-12</ref>
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Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
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<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.
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J Biol Chem 278(5):3265-74</ref>
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==References==
 
==References==
 
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Latest revision as of 13:05, 27 July 2012

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Systematic name STA1
Gene name STA1
Aliases DEX2, MAL5
Feature type not in systematic sequence of S288C
Coordinates Chr IX:..
Primary SGDID S000029522


Description of STA1: Glucoamylase (glucan 1,4-alpha-glucosidase)[1]




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Community Commentary

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Interactions

Regulatory

STA1 is regulated by Nrg1.Regulatory interaction with Nrg1
Nrg1 binds to the promoter of STA1, where it represses transcription of this gene. [2] [3]

Protein Details

Nucleic Acid Binding

Nrg1 specifically binds to two regions in the upstream activation sequence of the STA1 gene, as judged by gel retardation and DNase I footprinting analyses. [2] [3]



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References

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  1. ↑ Yamashita I, et al. (1985) Polymorphic extracellular glucoamylase genes and their evolutionary origin in the yeast Saccharomyces diastaticus. J Bacteriol 161(2):574-82 SGD PMID 3918018
  2. ↑ 2.0 2.1 Park SH, et al. (1999) Nrg1 is a transcriptional repressor for glucose repression of STA1 gene expression in Saccharomyces cerevisiae. Mol Cell Biol 19(3):2044-50 SGD PMID 10022891
  3. ↑ 3.0 3.1 submitted by Valmik K. Vyas on 2003-02-12

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