Difference between revisions of "YNR058W"

From SGD-Wiki
Jump to: navigation, search
(Automated import of articles)
(Automated import of articles)
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
<!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN-->
 
<!-- PLEASE DO NOT EDIT HERE. USE THE SECTION EDIT LINKS ON THE RIGHT MARGIN-->
 
{{PageTop}}
 
{{PageTop}}
 +
<protect>
 
{|{{Prettytable}} align = 'right' width = '200px'
 
{|{{Prettytable}} align = 'right' width = '200px'
 
|-
 
|-
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?locus=YNR058W YNR058W]  
+
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005341 YNR058W]  
 
|-
 
|-
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''BIO3 ''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||''BIO3 ''
Line 14: Line 15:
 
|nowrap| Chr XIV:734291..735733
 
|nowrap| Chr XIV:734291..735733
 
|-
 
|-
|colspan = '3'|{{Don'tEditThisBox}}
+
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000005341
 
|}
 
|}
 
<br>
 
<br>
'''Description of {{PAGENAME}}:''' 7,8-diamino-pelargonic acid aminotransferase (DAPA), catalyzes the second step in the biotin biosynthesis pathway; BIO3 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis<ref name='S000055833'>Phalip V, et al. (1999) Characterization of the biotin biosynthesis pathway in Saccharomyces cerevisiae and evidence for a cluster containing BIO5, a novel gene involved in vitamer uptake. Gene 232(1):43-51
+
'''Description of YNR058W:''' 7,8-diamino-pelargonic acid aminotransferase (DAPA), catalyzes the second step in the biotin biosynthesis pathway; BIO3 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis<ref name='S000055833'>Phalip V, et al. (1999) Characterization of the biotin biosynthesis pathway in Saccharomyces cerevisiae and evidence for a cluster containing BIO5, a novel gene involved in vitamer uptake. Gene 232(1):43-51
 
  {{SGDpaper|S000055833}} PMID 10333520</ref>
 
  {{SGDpaper|S000055833}} PMID 10333520</ref>
 
<br>
 
<br>
Line 23: Line 24:
 
<br>
 
<br>
 
<br>
 
<br>
 +
<br>
 +
</protect>
 +
__TOC__
 +
==Community Commentary==
 +
{{CommentaryHelp}}
 
=== DNA and RNA Details ===
 
=== DNA and RNA Details ===
 
[[Category:Topic:DNA and RNA Details]]
 
[[Category:Topic:DNA and RNA Details]]
Line 40: Line 46:
  
 
{{ShortCenteredHR}}
 
{{ShortCenteredHR}}
__TOC__
 
==Community Commentary==
 
{{CommentaryHelp}}
 
=== DNA and RNA Details ===
 
[[Category:Topic:DNA and RNA Details]]
 
==== Other DNA and RNA Details ====
 
[[Category:Topic:DNA and RNA Details:Other DNA and RNA Details]]
 
'''Other Topic''': expression [[Category:Topic:expression]]
 
  
Specifically higher expression in carbon limited chemostat cultures versus carbon excess. <ref name='S000073646'>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J Biol Chem 278(5):3265-74 {{SGDpaper|S000073646}} PMID 12414795</ref> <ref name = 'CAset9153-2003-07-25'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=9153 Viktor Boer] on 2003-07-25</ref>
 
  
{{ShortCenteredHR}}
 
=== Other ===
 
[[Category:Topic:Other]]
 
==== Gene Origin ====
 
[[Category:Topic:Other:Gene Origin]]
 
  
Horizontally transferred from gamma proteobacteria <ref name='S000082122'>Hall C, et al. (2005) Contribution of horizontal gene transfer to the evolution of Saccharomyces cerevisiae. Eukaryot Cell 4(6):1102-15 {{SGDpaper|S000082122}} PMID 15947202</ref> <ref name = 'CAset10543-2006-06-09'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=10543 Charles Hall] on 2006-06-09</ref>
+
<!-- PLEASE ADD Community Commentary ABOVE THIS MESSAGE. See below for an example of community annotation -->
 +
<!--
 +
Specifically higher expression in carbon limited chemostat cultures versus carbon excess.
 +
<ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur.  
 +
J Biol Chem 278(5):3265-74</ref>
 +
-->
 +
 
 +
 
  
{{ShortCenteredHR}}
+
<protect>
 
==References==
 
==References==
 
<!-- REFERENCES ARE AUTOMATICALLY GENERATED.  PLEASE DON'T EDIT THIS SECTION-->
 
<!-- REFERENCES ARE AUTOMATICALLY GENERATED.  PLEASE DON'T EDIT THIS SECTION-->
 
{{RefHelp}}
 
{{RefHelp}}
 +
</protect>

Latest revision as of 06:45, 23 January 2012

Share your knowledge...Edit this entry! <protect>

Systematic name YNR058W
Gene name BIO3
Aliases
Feature type ORF, Verified
Coordinates Chr XIV:734291..735733
Primary SGDID S000005341


Description of YNR058W: 7,8-diamino-pelargonic acid aminotransferase (DAPA), catalyzes the second step in the biotin biosynthesis pathway; BIO3 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis[1]




</protect>

Community Commentary

About Community Commentary. Please share your knowledge!

DNA and RNA Details

Other DNA and RNA Details

Other Topic: expression

Specifically higher expression in carbon limited chemostat cultures versus carbon excess. [2] [3]


Other

Gene Origin

Horizontally transferred from gamma proteobacteria [4] [5]





<protect>

References

See Help:References on how to add references

  1. Phalip V, et al. (1999) Characterization of the biotin biosynthesis pathway in Saccharomyces cerevisiae and evidence for a cluster containing BIO5, a novel gene involved in vitamer uptake. Gene 232(1):43-51 SGD PMID 10333520
  2. Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J Biol Chem 278(5):3265-74 SGD PMID 12414795
  3. submitted by Viktor Boer on 2003-07-25
  4. Hall C, et al. (2005) Contribution of horizontal gene transfer to the evolution of Saccharomyces cerevisiae. Eukaryot Cell 4(6):1102-15 SGD PMID 15947202
  5. submitted by Charles Hall on 2006-06-09

See Help:Categories on how to add the wiki page for this gene to a Category </protect>