Difference between revisions of "ARS415"

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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://db.yeastgenome.org/cgi-bin/locus.pl?dbid=S000130173 ARS415]  
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000130173 ARS415]  
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name'''        ||'' ''
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates'''
|nowrap| Chr IV:434782..435987
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|nowrap| Chr IV:434784..435989
 
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000130173
 
|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID'''          || S000130173
 
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'''Description of ARS415:''' Autonomously Replicating Sequence<ref name='S000117571'>Raveendranathan M, et al. (2006) Genome-wide replication profiles of S-phase checkpoint mutants reveal fragile sites in yeast. EMBO J 25(15):3627-39
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'''Description of ARS415:''' Putative replication origin, identified in multiple array studies, not yet confirmed by plasmid-based assay<ref name='S000114230'>Feng W, et al. (2006) Genomic mapping of single-stranded DNA in hydroxyurea-challenged yeasts identifies origins of replication. Nat Cell Biol 8(2):148-55 {{SGDpaper|S000114230}} PMID 16429127</ref><ref name='S000113866'>Raghuraman MK, et al. (2001) Replication dynamics of the yeast genome. Science 294(5540):115-21 {{SGDpaper|S000113866}} PMID 11588253</ref><ref name='S000117571'>Raveendranathan M, et al. (2006) Genome-wide replication profiles of S-phase checkpoint mutants reveal fragile sites in yeast. EMBO J 25(15):3627-39 {{SGDpaper|S000117571}} PMID 16888628</ref><ref name='S000069019'>Wyrick JJ, et al. (2001) Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: high-resolution mapping of replication origins. Science 294(5550):2357-60 {{SGDpaper|S000069019}} PMID 11743203</ref><ref name='S000119399'>Xu W, et al. (2006) Genome-wide mapping of ORC and Mcm2p binding sites on tiling arrays and identification of essential ARS consensus sequences in S. cerevisiae. BMC Genomics 7():276 {{SGDpaper|S000119399}} PMID 17067396</ref><ref name='S000072813'>Yabuki N, et al. (2002) Mapping of early firing origins on a replication profile of budding yeast. Genes Cells 7(8):781-9
  {{SGDpaper|S000117571}} PMID 16888628</ref>
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  {{SGDpaper|S000072813}} PMID 12167157</ref>
 
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Latest revision as of 07:45, 23 January 2012

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Systematic name ARS415
Gene name
Aliases
Feature type ARS
Coordinates Chr IV:434784..435989
Primary SGDID S000130173


Description of ARS415: Putative replication origin, identified in multiple array studies, not yet confirmed by plasmid-based assay[1][2][3][4][5][6]




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References

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  1. Feng W, et al. (2006) Genomic mapping of single-stranded DNA in hydroxyurea-challenged yeasts identifies origins of replication. Nat Cell Biol 8(2):148-55 SGD PMID 16429127
  2. Raghuraman MK, et al. (2001) Replication dynamics of the yeast genome. Science 294(5540):115-21 SGD PMID 11588253
  3. Raveendranathan M, et al. (2006) Genome-wide replication profiles of S-phase checkpoint mutants reveal fragile sites in yeast. EMBO J 25(15):3627-39 SGD PMID 16888628
  4. Wyrick JJ, et al. (2001) Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: high-resolution mapping of replication origins. Science 294(5550):2357-60 SGD PMID 11743203
  5. Xu W, et al. (2006) Genome-wide mapping of ORC and Mcm2p binding sites on tiling arrays and identification of essential ARS consensus sequences in S. cerevisiae. BMC Genomics 7():276 SGD PMID 17067396
  6. Yabuki N, et al. (2002) Mapping of early firing origins on a replication profile of budding yeast. Genes Cells 7(8):781-9 SGD PMID 12167157

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