Difference between revisions of "YOR048C"
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{|{{Prettytable}} align = 'right' width = '200px' | {|{{Prettytable}} align = 'right' width = '200px' | ||
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− | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005574 YOR048C] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''RAT1 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''RAT1 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
− | |nowrap| Chr XV: | + | |nowrap| Chr XV:421650..418630 |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005574 | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005574 | ||
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<br> | <br> | ||
− | '''Description of YOR048C:''' Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism, including rRNA and snRNA processing as well as mRNA transcription termination<ref name='S000044215'>Amberg DC, et al. (1992) Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA. Genes Dev 6(7):1173-89 {{SGDpaper|S000044215}} PMID 1628825</ref><ref name='S000049466'>Johnson AW (1997) Rat1p and Xrn1p are functionally interchangeable exoribonucleases that are restricted to and required in the nucleus and cytoplasm, respectively. Mol Cell Biol 17(10):6122-30 {{SGDpaper|S000049466}} PMID 9315672</ref><ref name='S000080022'>Kim M, et al. (2004) The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II. Nature 432(7016):517-22 | + | '''Description of YOR048C:''' Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism, including rRNA and snRNA processing as well as poly (A+) dependent and independent mRNA transcription termination<ref name='S000044215'>Amberg DC, et al. (1992) Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA. Genes Dev 6(7):1173-89 {{SGDpaper|S000044215}} PMID 1628825</ref><ref name='S000131998'>Ghazal G, et al. (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109 {{SGDpaper|S000131998}} PMID 19818713</ref><ref name='S000049466'>Johnson AW (1997) Rat1p and Xrn1p are functionally interchangeable exoribonucleases that are restricted to and required in the nucleus and cytoplasm, respectively. Mol Cell Biol 17(10):6122-30 {{SGDpaper|S000049466}} PMID 9315672</ref><ref name='S000080022'>Kim M, et al. (2004) The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II. Nature 432(7016):517-22 |
{{SGDpaper|S000080022}} PMID 15565157</ref> | {{SGDpaper|S000080022}} PMID 15565157</ref> | ||
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J Biol Chem 278(5):3265-74</ref> | J Biol Chem 278(5):3265-74</ref> | ||
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Latest revision as of 07:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
Systematic name | YOR048C |
Gene name | RAT1 |
Aliases | HKE1, TAP1, XRN2 |
Feature type | ORF, Verified |
Coordinates | Chr XV:421650..418630 |
Primary SGDID | S000005574 |
Description of YOR048C: Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism, including rRNA and snRNA processing as well as poly (A+) dependent and independent mRNA transcription termination[1][2][3][4]
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References
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- ↑ Amberg DC, et al. (1992) Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA. Genes Dev 6(7):1173-89 SGD PMID 1628825
- ↑ Ghazal G, et al. (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109 SGD PMID 19818713
- ↑ Johnson AW (1997) Rat1p and Xrn1p are functionally interchangeable exoribonucleases that are restricted to and required in the nucleus and cytoplasm, respectively. Mol Cell Biol 17(10):6122-30 SGD PMID 9315672
- ↑ Kim M, et al. (2004) The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II. Nature 432(7016):517-22 SGD PMID 15565157
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