Difference between revisions of "tP(UGG)M"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000006684 tP(UGG)M] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SUF7 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''SUF7 '' | ||
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|nowrap| Chr XIII:196170..196068 | |nowrap| Chr XIII:196170..196068 | ||
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000006684 |
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| − | '''Description of {{ | + | '''Description of tP(UGG)M:''' Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis; target of K. lactis zymocin; can mutate to suppress +1 frameshift mutations in proline codons<ref name='S000147623'>Chan PP and Lowe TM (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7 {{SGDpaper|S000147623}} PMID 18984615</ref><ref name='S000043189'>Culbertson MR, et al. (1977) Frameshifts and frameshift suppressors in Saccharomyces cerevisiae. Genetics 86(4):745-64 {{SGDpaper|S000043189}} PMID 72702</ref><ref name='S000054194'>Cummins CM, et al. (1985) Frameshift suppressor mutations outside the anticodon in yeast proline tRNAs containing an intervening sequence. Mol Cell Biol 5(7):1760-71 {{SGDpaper|S000054194}} PMID 3894935</ref><ref name='S000127524'>Huang B, et al. (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14(10):2183-94 |
| + | {{SGDpaper|S000127524}} PMID 18755837</ref> | ||
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==Community Commentary== | ==Community Commentary== | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 06:45, 23 January 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | tP(UGG)M |
| Gene name | SUF7 |
| Aliases | |
| Feature type | tRNA |
| Coordinates | Chr XIII:196170..196068 |
| Primary SGDID | S000006684 |
Description of tP(UGG)M: Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis; target of K. lactis zymocin; can mutate to suppress +1 frameshift mutations in proline codons[1][2][3][4]
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References
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- ↑ Chan PP and Lowe TM (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7 SGD PMID 18984615
- ↑ Culbertson MR, et al. (1977) Frameshifts and frameshift suppressors in Saccharomyces cerevisiae. Genetics 86(4):745-64 SGD PMID 72702
- ↑ Cummins CM, et al. (1985) Frameshift suppressor mutations outside the anticodon in yeast proline tRNAs containing an intervening sequence. Mol Cell Biol 5(7):1760-71 SGD PMID 3894935
- ↑ Huang B, et al. (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14(10):2183-94 SGD PMID 18755837
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