Difference between revisions of "Systematic Sequencing Table"

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|  
 
|  
 
[https://www.yeastgenome.org/contig/Chromosome_II II]  
 
[https://www.yeastgenome.org/contig/Chromosome_II II]  
−
<br>[http://www.yeastgenome.org/reference/S000057497/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/7813418 PubMed], [[media:Feldmann_chr_II.pdf | PDF]]
+
<br>[https://www.yeastgenome.org/reference/S000057497 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/7813418 PubMed], [[media:Feldmann_chr_II.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Horst_Feldmann_1721 H. Feldmann], Muenchen, Germany
 
| [https://www-aws.yeastgenome.org/colleague/Horst_Feldmann_1721 H. Feldmann], Muenchen, Germany
 
| 813,184
 
| 813,184
Line 32: Line 32:
 
|  
 
|  
 
[https://www.yeastgenome.org/contig/Chromosome_III III]  
 
[https://www.yeastgenome.org/contig/Chromosome_III III]  
−
<br>[http://www.yeastgenome.org/reference/S000060078/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/1574125 PubMed], [[media:Oliver_chr_III.pdf | PDF]]
+
<br>[https://www.yeastgenome.org/reference/S000060078 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/1574125 PubMed], [[media:Oliver_chr_III.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Stephen_G._Oliver_4376 S.G. Oliver], Manchester, England
 
| [https://www-aws.yeastgenome.org/colleague/Stephen_G._Oliver_4376 S.G. Oliver], Manchester, England
 
| 316,620
 
| 316,620
Line 43: Line 43:
 
|  
 
|  
 
[https://www.yeastgenome.org/contig/Chromosome_IV IV]
 
[https://www.yeastgenome.org/contig/Chromosome_IV IV]
−
<br>[http://www.yeastgenome.org/reference/S000060079/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169867 PubMed], [[media:Jacq_chr_IV.pdf | PDF]]
+
<br>[https://www.yeastgenome.org/reference/S000060079 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169867 PubMed], [[media:Jacq_chr_IV.pdf | PDF]]
 
|  
 
|  
 
''Telo to Cen'': [https://www-aws.yeastgenome.org/colleague/Jacq_Claude_8573 C. Jacq], Paris, France
 
''Telo to Cen'': [https://www-aws.yeastgenome.org/colleague/Jacq_Claude_8573 C. Jacq], Paris, France
Line 58: Line 58:
 
|  
 
|  
 
[https://www.yeastgenome.org/contig/Chromosome_V V]
 
[https://www.yeastgenome.org/contig/Chromosome_V V]
−
<br>[http://www.yeastgenome.org/reference/S000058121/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169868 PubMed], [[media:Dietrich_chr_V.pdf | PDF]]
+
<br>[https://www.yeastgenome.org/reference/S000058121 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169868 PubMed], [[media:Dietrich_chr_V.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Ronald_W._Davis_1262 R. Davis], Stanford, California, USA
 
| [https://www-aws.yeastgenome.org/colleague/Ronald_W._Davis_1262 R. Davis], Stanford, California, USA
 
| 576,874
 
| 576,874
Line 69: Line 69:
 
|  
 
|  
 
[https://www.yeastgenome.org/contig/Chromosome_VI VI]
 
[https://www.yeastgenome.org/contig/Chromosome_VI VI]
−
<br>[http://www.yeastgenome.org/reference/S000057428/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/7670463 PubMed], [[media:Murakami_chr_VI.pdf | PDF]]
+
<br>[https://www.yeastgenome.org/reference/S000057428 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/7670463 PubMed], [[media:Murakami_chr_VI.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Yasufumi_Murakami_4124 Y. Murakami], Tokyo, Japan
 
| [https://www-aws.yeastgenome.org/colleague/Yasufumi_Murakami_4124 Y. Murakami], Tokyo, Japan
 
| 270,161
 
| 270,161
Line 80: Line 80:
 
|  
 
|  
 
[https://www.yeastgenome.org/contig/Chromosome_VII VII]  
 
[https://www.yeastgenome.org/contig/Chromosome_VII VII]  
−
<br>[http://www.yeastgenome.org/reference/S000060080/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169869 PubMed], [[media:Tettelin_chr_VII.pdf | PDF]]
+
<br>[https://www.yeastgenome.org/reference/S000060080 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169869 PubMed], [[media:Tettelin_chr_VII.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Herve_Tettelin_9854 H. Tettelin], Louvain-la-Neuve, Belgium
 
| [https://www-aws.yeastgenome.org/colleague/Herve_Tettelin_9854 H. Tettelin], Louvain-la-Neuve, Belgium
 
| 1,090,940
 
| 1,090,940
Line 91: Line 91:
 
|  
 
|  
 
[https://www.yeastgenome.org/contig/Chromosome_VIII VIII]  
 
[https://www.yeastgenome.org/contig/Chromosome_VIII VIII]  
−
<br>[http://www.yeastgenome.org/reference/S000057599/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/8091229 PubMed], [[media:Johnston_chr_VIII.pdf | PDF]]
+
<br>[https://www.yeastgenome.org/reference/S000057599 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/8091229 PubMed], [[media:Johnston_chr_VIII.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Mark_Johnston_2827 M. Johnston], St. Louis, Missouri, USA
 
| [https://www-aws.yeastgenome.org/colleague/Mark_Johnston_2827 M. Johnston], St. Louis, Missouri, USA
 
| 562,643
 
| 562,643
Line 102: Line 102:
 
|
 
|
 
[https://www.yeastgenome.org/contig/Chromosome_IX IX]   
 
[https://www.yeastgenome.org/contig/Chromosome_IX IX]   
−
<br>[http://www.yeastgenome.org/reference/S000060081/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169870 PubMed], [[media:Barrell_chr_IX.pdf | PDF]]
+
<br>[https://www.yeastgenome.org/reference/S000060081 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169870 PubMed], [[media:Barrell_chr_IX.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Barclay_G._Barrell_296 B. Barrell], Cambridge, England
 
| [https://www-aws.yeastgenome.org/colleague/Barclay_G._Barrell_296 B. Barrell], Cambridge, England
 
| 439,888
 
| 439,888
Line 113: Line 113:
 
|
 
|
 
[https://www.yeastgenome.org/contig/Chromosome_X X]   
 
[https://www.yeastgenome.org/contig/Chromosome_X X]   
−
<br>[http://www.yeastgenome.org/reference/S000060082/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/8641269 PubMed], [[media:Galibert_chr_X.pdf | PDF]]
+
<br>[https://www.yeastgenome.org/reference/S000060082 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/8641269 PubMed], [[media:Galibert_chr_X.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Francis_Galibert_1906 F. Galibert], Rouen, France
 
| [https://www-aws.yeastgenome.org/colleague/Francis_Galibert_1906 F. Galibert], Rouen, France
 
| 745,751
 
| 745,751
Line 124: Line 124:
 
|  
 
|  
 
[https://www.yeastgenome.org/contig/Chromosome_XI XI]   
 
[https://www.yeastgenome.org/contig/Chromosome_XI XI]   
−
<br>[http://www.yeastgenome.org/reference/S000057636/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/8196765 PubMed], [[media:Dujon_chr_XI.pdf | PDF]]
+
<br>[https://www.yeastgenome.org/reference/S000057636 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/8196765 PubMed], [[media:Dujon_chr_XI.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Bernard_Dujon_1514 B. Dujon], Paris, France
 
| [https://www-aws.yeastgenome.org/colleague/Bernard_Dujon_1514 B. Dujon], Paris, France
 
| 666,816
 
| 666,816
Line 134: Line 134:
 
|-
 
|-
 
| [https://www.yeastgenome.org/contig/Chromosome_XII XII]  
 
| [https://www.yeastgenome.org/contig/Chromosome_XII XII]  
−
[http://www.yeastgenome.org/reference/S000060083/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169871 PubMed], [[media:Johnston_chr_XII.pdf | PDF]]
+
[https://www.yeastgenome.org/reference/S000060083 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169871 PubMed], [[media:Johnston_chr_XII.pdf | PDF]]
 
|  
 
|  
 
''Left'': [https://www-aws.yeastgenome.org/colleague/Jorg_D._Hoheisel_2528 J. Hoheisel], Heidelberg, Germany
 
''Left'': [https://www-aws.yeastgenome.org/colleague/Jorg_D._Hoheisel_2528 J. Hoheisel], Heidelberg, Germany
Line 146: Line 146:
 
|-
 
|-
 
|[https://www.yeastgenome.org/contig/Chromosome_XIII XIII]  
 
|[https://www.yeastgenome.org/contig/Chromosome_XIII XIII]  
−
[http://www.yeastgenome.org/reference/S000060084/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169872 PubMed], [[media:Barrell_chr_XIII.pdf | PDF]]
+
[https://www.yeastgenome.org/reference/S000060084 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169872 PubMed], [[media:Barrell_chr_XIII.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Barclay_G._Barrell_296 B. Barrell], Cambridge, England
 
| [https://www-aws.yeastgenome.org/colleague/Barclay_G._Barrell_296 B. Barrell], Cambridge, England
 
| 924,431
 
| 924,431
Line 156: Line 156:
 
|-
 
|-
 
| [https://www.yeastgenome.org/contig/Chromosome_XIV XIV]   
 
| [https://www.yeastgenome.org/contig/Chromosome_XIV XIV]   
−
[http://www.yeastgenome.org/reference/S000060085/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169873 PubMed], [[media:Philippsen_chr_XIV.pdf | PDF]]
+
[https://www.yeastgenome.org/reference/S000060085 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169873 PubMed], [[media:Philippsen_chr_XIV.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Peter_Philippsen_4609 P. Philippsen, Basel], Switzerland
 
| [https://www-aws.yeastgenome.org/colleague/Peter_Philippsen_4609 P. Philippsen, Basel], Switzerland
 
| 784,333
 
| 784,333
Line 166: Line 166:
 
|-
 
|-
 
| [https://www.yeastgenome.org/contig/Chromosome_XV XV]   
 
| [https://www.yeastgenome.org/contig/Chromosome_XV XV]   
−
[http://www.yeastgenome.org/reference/S000060298/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169874 PubMed], [[media:Dujon_chr_XV.pdf | PDF]]
+
[https://www.yeastgenome.org/reference/S000060298 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169874 PubMed], [[media:Dujon_chr_XV.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Bernard_Dujon_1514 B. Dujon], Paris, France
 
| [https://www-aws.yeastgenome.org/colleague/Bernard_Dujon_1514 B. Dujon], Paris, France
 
| 1,091,291
 
| 1,091,291
Line 176: Line 176:
 
|-
 
|-
 
| [https://www.yeastgenome.org/contig/Chromosome_XVI XVI]   
 
| [https://www.yeastgenome.org/contig/Chromosome_XVI XVI]   
−
[http://www.yeastgenome.org/reference/S000045447/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169875 PubMed], [[media:Bussey_chr_XVI.pdf | PDF]]
+
[https://www.yeastgenome.org/reference/S000045447 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9169875 PubMed], [[media:Bussey_chr_XVI.pdf | PDF]]
 
|  
 
|  
 
''Left 1'': [https://www-aws.yeastgenome.org/colleague/Andre_Goffeau_2067 A. Goffeau], Louvain-la-Neuve, Belgium
 
''Left 1'': [https://www-aws.yeastgenome.org/colleague/Andre_Goffeau_2067 A. Goffeau], Louvain-la-Neuve, Belgium
Line 191: Line 191:
 
|-
 
|-
 
| [https://www.yeastgenome.org/contig/Chromosome_mito Mitochondrial]
 
| [https://www.yeastgenome.org/contig/Chromosome_mito Mitochondrial]
−
[http://www.yeastgenome.org/reference/S000058438/overview SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9872396 PubMed], [[media:Foury_chr_mito.pdf | PDF]]
+
[https://www.yeastgenome.org/reference/S000058438 SGD], [https://www.ncbi.nlm.nih.gov/pubmed/9872396 PubMed], [[media:Foury_chr_mito.pdf | PDF]]
 
| [https://www-aws.yeastgenome.org/colleague/Francoise_Foury_1817 Foury, Francoise], Unite de Biochimie Physiologique
 
| [https://www-aws.yeastgenome.org/colleague/Francoise_Foury_1817 Foury, Francoise], Unite de Biochimie Physiologique
 
| 85,779
 
| 85,779

Revision as of 06:58, 23 August 2017

Saccharomyces cerevisiae chromosome statistics and retrieval options

Chromosome Region & Reference DNA Coordinator Total Length S288c sub-strain(s) Retrieve

I
SGD, PubMed, PDF

H. Bussey, Montreal, Canada 230,218 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

II
SGD, PubMed, PDF

H. Feldmann, Muenchen, Germany 813,184 genuine strain S288C

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

III
SGD, PubMed, PDF

S.G. Oliver, Manchester, England 316,620 XJ24-24a, AB972, A364A, DC5

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

IV
SGD, PubMed, PDF

Telo to Cen: C. Jacq, Paris, France
Cen to 960K: B. Barrell, Cambridge, England
960K to 1110K: M. Johnston, St. Louis, Missouri, USA
1110K to Telo: R. Davis, Stanford, California, USA

1,531,933 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

V
SGD, PubMed, PDF

R. Davis, Stanford, California, USA 576,874 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

VI
SGD, PubMed, PDF

Y. Murakami, Tokyo, Japan 270,161 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

VII
SGD, PubMed, PDF

H. Tettelin, Louvain-la-Neuve, Belgium 1,090,940 FY1679

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

VIII
SGD, PubMed, PDF

M. Johnston, St. Louis, Missouri, USA 562,643 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

IX
SGD, PubMed, PDF

B. Barrell, Cambridge, England 439,888 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

X
SGD, PubMed, PDF

F. Galibert, Rouen, France 745,751 FY1679

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

XI
SGD, PubMed, PDF

B. Dujon, Paris, France 666,816 FY1679

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

XII

SGD, PubMed, PDF

Left: J. Hoheisel, Heidelberg, Germany
Right: M. Johnston, St. Louis, Missouri, USA

1,078,177 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

XIII

SGD, PubMed, PDF

B. Barrell, Cambridge, England 924,431 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

XIV

SGD, PubMed, PDF

P. Philippsen, Basel, Switzerland 784,333 FY1679, AB972

JBrowse Viewer
Gene/SequenceResources
Download FASTA

XV

SGD, PubMed, PDF

B. Dujon, Paris, France 1,091,291 FY1679

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

XVI

SGD, PubMed, PDF

Left 1: A. Goffeau, Louvain-la-Neuve, Belgium
Left 2: H. Bussey, Montreal, Canada
Left 2a: R. Davis, Stanford, California, USA
Right 1: B. Barrell, Cambridge, England
Right 2: M. Johnston, St. Louis, Missouri, USA

948,066 AB972

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

Mitochondrial

SGD, PubMed, PDF

Foury, Francoise, Unite de Biochimie Physiologique 85,779 FY1679

JBrowse Viewer
Gene/Sequence Resources
Download FASTA

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