Difference between revisions of "YNL186W"
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| − | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http:// | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Systematic name''' || [http://www.yeastgenome.org/cgi-bin/locus.pl?dbid=S000005130 YNL186W] |
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''UBP10 '' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Gene name''' ||''UBP10 '' | ||
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|valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Coordinates''' | ||
| − | |nowrap| Chr XIV: | + | |nowrap| Chr XIV:289498..291876 |
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| − | | | + | |valign="top" nowrap bgcolor="{{SGDblue}}"| '''Primary SGDID''' || S000005130 |
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| − | '''Description of | + | '''Description of YNL186W:''' Ubiquitin-specific protease, deubiquitinates Ub-protein moieties; interacts with proteins that function in rRNA production and ribosome biogenesis; stabilizes Rpa190p, the largest subunit of RNAP I, by mediating its deubiquitination; may regulate silencing by acting on Sir4p; involved in posttranscriptionally regulating Gap1p and possibly other transporters; localized to the nucleolus; human USP36 is a functional analog of Ubp10p<ref name='S000074445'>Kahana A (2001) The deubiquitinating enzyme Dot4p is involved in regulating nutrient uptake. Biochem Biophys Res Commun 282(4):916-20 {{SGDpaper|S000074445}} PMID 11352638</ref><ref name='S000042118'>Kahana A and Gottschling DE (1999) DOT4 links silencing and cell growth in Saccharomyces cerevisiae. Mol Cell Biol 19(10):6608-20 {{SGDpaper|S000042118}} PMID 10490600</ref><ref name='S000150649'>Richardson LA, et al. (2012) A Conserved Deubiquitinating Enzyme Controls Cell Growth by Regulating RNA Polymerase I Stability. Cell Rep () {{SGDpaper|S000150649}} PMID 22902402</ref><ref name='S000047238'>Singer MS, et al. (1998) Identification of high-copy disruptors of telomeric silencing in Saccharomyces cerevisiae. Genetics 150(2):613-32 |
| − | {{SGDpaper| | + | {{SGDpaper|S000047238}} PMID 9755194</ref> |
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==Community Commentary== | ==Community Commentary== | ||
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| + | === Interactions === | ||
| + | [[Category:Topic:Interactions]] | ||
| + | ==== Two Hybrid ==== | ||
| + | [[Category:Topic:Interactions:Two Hybrid]] | ||
| + | Two Hybrid interaction with SIR4 [[Category:Two Hybrid Interactions with SIR4]]<br> | ||
| + | The N-terminal 250 aa of Ubp10p interacts with the C-terminus of Sir4p (residues 839-1358). <ref name='S000042118'>Kahana A and Gottschling DE (1999) DOT4 links silencing and cell growth in Saccharomyces cerevisiae. Mol Cell Biol 19(10):6608-20 {{SGDpaper|S000042118}} PMID 10490600</ref> <ref name = 'CAset2117-2003-03-17'>submitted by [http://db.yeastgenome.org/cgi-bin/colleague/colleagueSearch?id=2117 Daniel E. Gottschling] on 2003-03-17</ref> | ||
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| + | Specifically higher expression in carbon limited chemostat cultures versus carbon excess. | ||
| + | <ref>Boer VM, et al. (2003) The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. | ||
| + | J Biol Chem 278(5):3265-74</ref> | ||
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==References== | ==References== | ||
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Latest revision as of 13:05, 11 September 2012
Share your knowledge...Edit this entry! <protect>
| Systematic name | YNL186W |
| Gene name | UBP10 |
| Aliases | DOT4 |
| Feature type | ORF, Verified |
| Coordinates | Chr XIV:289498..291876 |
| Primary SGDID | S000005130 |
Description of YNL186W: Ubiquitin-specific protease, deubiquitinates Ub-protein moieties; interacts with proteins that function in rRNA production and ribosome biogenesis; stabilizes Rpa190p, the largest subunit of RNAP I, by mediating its deubiquitination; may regulate silencing by acting on Sir4p; involved in posttranscriptionally regulating Gap1p and possibly other transporters; localized to the nucleolus; human USP36 is a functional analog of Ubp10p[1][2][3][4]
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Community Commentary
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Interactions
Two Hybrid
Two Hybrid interaction with SIR4
The N-terminal 250 aa of Ubp10p interacts with the C-terminus of Sir4p (residues 839-1358). [2] [5]
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References
See Help:References on how to add references
- ↑ Kahana A (2001) The deubiquitinating enzyme Dot4p is involved in regulating nutrient uptake. Biochem Biophys Res Commun 282(4):916-20 SGD PMID 11352638
- ↑ 2.0 2.1 Kahana A and Gottschling DE (1999) DOT4 links silencing and cell growth in Saccharomyces cerevisiae. Mol Cell Biol 19(10):6608-20 SGD PMID 10490600
- ↑ Richardson LA, et al. (2012) A Conserved Deubiquitinating Enzyme Controls Cell Growth by Regulating RNA Polymerase I Stability. Cell Rep () SGD PMID 22902402
- ↑ Singer MS, et al. (1998) Identification of high-copy disruptors of telomeric silencing in Saccharomyces cerevisiae. Genetics 150(2):613-32 SGD PMID 9755194
- ↑ submitted by Daniel E. Gottschling on 2003-03-17
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